Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p02950 Brassica napus
A03p16960 Brassica napus
A04p23110 Brassica napus
Aa31LG5G6350 Aethionema arabicum
Aa31LG5G6370 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.448 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.511 Anthoceros agrestis
Actinidia23178 Actinidia chinensis
Actinidia23182 Actinidia chinensis
Actinidia32596 Actinidia chinensis
Ah.15g096510 Amaranthus hybridus
AL4G25190 Arabidopsis lyrata
AL4G25210 Arabidopsis lyrata
Aqoxy2G00731 Aquilegia oxysepala
Aqoxy2G00736 Aquilegia oxysepala
Aqoxy4G02143 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6WW78Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ANYB6V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C6LA65 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D8LDTS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F02FPT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HWE26N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WIJ2N1 Arachis hypogaea
AT2G30330 Arabidopsis thaliana
AT2G30350 Arabidopsis thaliana
ATR0586G003 Amborella trichopoda
ATR0681G169 Amborella trichopoda
Atru.chr1.2538 Acer truncatum
Atru.chr6.2418 Acer truncatum
AUR62009722 Chenopodium quinoa
AUR62009726 Chenopodium quinoa
AUR62036221 Chenopodium quinoa
AUR62036225 Chenopodium quinoa
BcaB01g04112 Brassica carinata
BcaB01g04113 Brassica carinata
BcaB05g22214 Brassica carinata
BcaB06g28361 Brassica carinata
BcaC01g05988 Brassica carinata
BcaC01g05989 Brassica carinata
BcaC02g08025 Brassica carinata
BcaC02g08029 Brassica carinata
BcaC02g08132 Brassica carinata
BcaC04g19883 Brassica carinata
BcaC06g30638 Brassica carinata
BcaNung03485 Brassica carinata
BolC3t14376H Brassica oleracea
BolC4t27329H Brassica oleracea
BolC4t27433H Brassica oleracea
BolC7t45569H Brassica oleracea
BolC9t57873H Brassica oleracea
BraA04t17841Z Brassica rapa
C02p16040 Brassica napus
C03p19980 Brassica napus
C04p59230 Brassica napus
C04p59280 Brassica napus
C07p50650 Brassica napus
C09p50170 Brassica napus
CAN.G1358.8 Capsicum annuum
CAN.G473.23 Capsicum annuum
CAN.G473.25 Capsicum annuum
CANSAT54G2364 Cannabis sativa
CANSAT54G2949 Cannabis sativa
CARHR123650 Cardamine hirsuta
CARHR123670 Cardamine hirsuta
Carub.0004s1148 Capsella rubella
Carub.0004s1150 Capsella rubella
Ca_05691_v3 Cicer arietinum L.
Ca_15029_v3 Cicer arietinum L.
CBR_g20119 Chara braunii
CBR_g31178 Chara braunii
Cc01_g09100 Coffea canephora
Cc01_g15150 Coffea canephora
CDE04G2750 Ceratophyllum demersum
CDE06G1730 Ceratophyllum demersum
CDE12G0746 Ceratophyllum demersum
Cfa010938 Carpinus fangiana
Cfa011807 Carpinus fangiana
Cfa023829 Carpinus fangiana
Ciclev10001469m.g Citrus clementina
Ciclev10017044m.g Citrus clementina
CiPaw.13G066200 Carya illinoinensis
CiPaw.14G052200 Carya illinoinensis
CiPaw.14G052300 Carya illinoinensis
ClCG02G019170 Citrullus lanatus
ClCG03G000240 Citrullus lanatus
COL.COLO4_11184 Corchorus olitorius
COL.COLO4_11185 Corchorus olitorius
COL.COLO4_11190 Corchorus olitorius
Cpa.g.sc2.244 Carica papaya
Cpa.g.sc2.324 Carica papaya
Cpa.g.sc2.331 Carica papaya
Cre01.g021000 Chlamydomonas reinhardtii
Cre07.g351500 Chlamydomonas reinhardtii
CsaV3_1G036670 Cucumis sativus L.
CsaV3_6G019000 Cucumis sativus L.
CSS0003249 Camellia sinensis var. sinensis
CSS0017661 Camellia sinensis var. sinensis
CSS0028475 Camellia sinensis var. sinensis
CSS0048295 Camellia sinensis var. sinensis
CSS0050025 Camellia sinensis var. sinensis
DCAR_004798 Daucus carota
DCAR_014464 Daucus carota
Dinv12257 Davidia involucrata
Dinv28710 Davidia involucrata
Dinv28716 Davidia involucrata
Duzib168G1857 Durio zibethinus
Duzib168G1911 Durio zibethinus
ECA248G1568 Erigeron canadensis
ECA248G3831 Erigeron canadensis
EL10Ac7g15858 Beta vulgaris
EL10Ac7g15863 Beta vulgaris
Eucgr.B02271 Eucalyptus grandis
Eucgr.B04014 Eucalyptus grandis
Eucgr.B04017 Eucalyptus grandis
Eucgr.C01059 Eucalyptus grandis
Eucgr.J01841 Eucalyptus grandis
Eucgr.L02725 Eucalyptus grandis
FAN11G0211 Fragaria x ananassa
FAN11G3581 Fragaria x ananassa
FAN16G0225 Fragaria x ananassa
FAN16G2868 Fragaria x ananassa
FAN21G3096 Fragaria x ananassa
FAN21G3738 Fragaria x ananassa
FAN25G0776 Fragaria x ananassa
FAN26G2163 Fragaria x ananassa
FvH4_3g40170 Fragaria vesca
FvH4_3g40230 Fragaria vesca
Glyma.02G234100 Glycine max
Glyma.11G161200 Glycine max
Glyma.18G054900 Glycine max
Gohir.1Z049334 Gossypium hirsutum
Gohir.1Z049465 Gossypium hirsutum
Gohir.1Z049629 Gossypium hirsutum
Gohir.A02G179401 Gossypium hirsutum
Gohir.A03G024200 Gossypium hirsutum
Gohir.A05G415701 Gossypium hirsutum
Gohir.A06G201400 Gossypium hirsutum
Gohir.A08G000016 Gossypium hirsutum
Gohir.A08G000028 Gossypium hirsutum
Gohir.A13G235800 Gossypium hirsutum
Gohir.D03G144300 Gossypium hirsutum
Gohir.D04G000035 Gossypium hirsutum
Gohir.D11G203101 Gossypium hirsutum
Gohir.D13G241450 Gossypium hirsutum
Gohir.D13G241500 Gossypium hirsutum
Gorai.003G151600 Gossypium raimondii
Gorai.005G000200 Gossypium raimondii
Gorai.005G269000 Gossypium raimondii
Gorai.007G217700 Gossypium raimondii
Gorai.010G000700 Gossypium raimondii
Gorai.012G000400 Gossypium raimondii
Gorai.013G272400 Gossypium raimondii
GSVIVG01024586001 Vitis vinifera
GSVIVG01024598001 Vitis vinifera
HanXRQChr01g0012551 Helianthus annuus
HanXRQChr01g0013301 Helianthus annuus
Haze_24442 Corylus avellana
Haze_24447 Corylus avellana
Hma1.2p1_1637F.1_g294890 Hydrangea macrophylla
Hma1.2p1_2270F.1_g318510 Hydrangea macrophylla
HPP92_007517 Vanilla planifolia
HPP92_009016 Vanilla planifolia
Hund05050 Selenicereus undatus
Hund18966 Selenicereus undatus
Lalb_Chr10g0103701 Lupinus albus
Lalb_Chr15g0085961 Lupinus albus
Lalb_Chr17g0345531 Lupinus albus
Lalb_Chr20g0117351 Lupinus albus
Lj1A123G47 Lonicera japonica
Lj1P122T40 Lonicera japonica
Lj6g0027008 Lotus japonicus
LjContig00141g0012114 Lotus japonicus
Lsat_1_v5_gn_5_175220 Lactuca sativa
Lsat_1_v5_gn_5_175460 Lactuca sativa
Manes.18G137600 Manihot esculenta
Manes.18G140300 Manihot esculenta
Mapoly0004s0007 Marchantia polymorpha
Mapoly0069s0031 Marchantia polymorpha
MBI07_g35969_MAGBIO Magnolia biondii
MBI15_g06972_MAGBIO Magnolia biondii
MBI15_g36803_MAGBIO Magnolia biondii
MCO04G004 Micromonas commoda
MCO16G118 Micromonas commoda
MD03G1055200 Malus domestica
MD03G1059100 Malus domestica
MD03G1104100 Malus domestica
MD11G1056400 Malus domestica
MD11G1061300 Malus domestica
Medtr3g466410 Medicago truncatula
Medtr5g074880 Medicago truncatula
MELO3C020503.2 Cucumis melo
MELO3C025682.2 Cucumis melo
Migut.D00832 Erythranthe guttata
Migut.H01101 Erythranthe guttata
MSTRG.12701 Avicennia marina
MSTRG.21249 Avicennia marina
Nitab4.5_0000734g0130 Nicotiana tabacum
Nitab4.5_0000755g0130 Nicotiana tabacum
Nitab4.5_0002601g0080 Nicotiana tabacum
Nitab4.5_0009324g0020 Nicotiana tabacum
Nn4g26021 Nelumbo nucifera
Nn5g26899 Nelumbo nucifera
Nn5g26910 Nelumbo nucifera
Oeu011367.1 Olea europaea
Os07g0230500 Oryza sativa ssp. japonica
Os11g0112300 Oryza sativa ssp. japonica
Os12g0111900 Oryza sativa ssp. japonica
Os12g0416500 Oryza sativa ssp. japonica
Peaxi162Scf00003g00413 Petunia axillaris
Peaxi162Scf01078g00415 Petunia axillaris
PGR102G2282 Punica granatum
PGR119G0696 Punica granatum
PGSC0003DMG400020864 Solanum tuberosum
PGSC0003DMG400026358 Solanum tuberosum
Phvul.006G076300 Phaseolus vulgaris
Phvul.008G249600 Phaseolus vulgaris
Potri.013G155900 Populus trichocarpa
Potri.013G156700 Populus trichocarpa
Potri.019G127600 Populus trichocarpa
Pp3c10_1920 Physcomitrium patens
Pp3c20_8500 Physcomitrium patens
PRCOL_00000864 Prasinoderma coloniale
Prupe.1G103300 Prunus persica
Prupe.1G103400 Prunus persica
Prupe.1G106000 Prunus persica
Prupe.1G108400 Prunus persica
Prupe.3G073500 Prunus persica
Prupe.6G043600 Prunus persica
Prupe.6G044100 Prunus persica
Prupe.6G045800 Prunus persica
Prupe.6G095400 Prunus persica
Psat2g052040 Pisum sativum
Psat5g150440 Pisum sativum
PSO017G2121 Papaver somniferum
PSO170G0682 Papaver somniferum
PSO339G0904 Papaver somniferum
PSO384G2467 Papaver somniferum
QL01p025227 Quercus lobata
QL03p067094 Quercus lobata
RcHm_v2.0_Chr5g0072361 Rosa chinensis
RcHm_v2.0_Chr5g0072441 Rosa chinensis
Rhsim01G0242200 Rhododendron simsii
Rhsim13G0061900 Rhododendron simsii
Sabra13G0125800 Salix brachista
Sabra13G0126300 Salix brachista
SalBow2G0685 Salvia bowleyana
SalBow2G2295 Salvia bowleyana
Sc06g0008070 Simmondsia chinensis
Sc12g0000140 Simmondsia chinensis
Sed0011436 Sechium edule
Sed0022472 Sechium edule
SEGI_33829 Sequoiadendron giganteum
SEGI_39190 Sequoiadendron giganteum
SGA_v2.0_scaffold6G03299 Striga asiatica
SGA_v2.0_scaffold77G25373 Striga asiatica
SHI19244 Sapria himalayana
SHI19259 Sapria himalayana
SMO361G0428 Selaginella moellendorffii
SMO364G0016 Selaginella moellendorffii
Solyc09g031790.4 Solanum lycopersicum
Solyc11g068450.2 Solanum lycopersicum
Sopen09g014780 Solanum pennellii
Sopen11g027160 Solanum pennellii
Sp4g12890 Schrenkiella parvula
Sp4g12910 Schrenkiella parvula
TAR287G0002 Trochodendron aralioides
TAR369G0569 Trochodendron aralioides
TAR623G0587 Trochodendron aralioides
TAR623G0666 Trochodendron aralioides
THA.LOC104800780 Tarenaya hassleriana
THA.LOC104826270 Tarenaya hassleriana
Thecc.09G361000 Theobroma cacao
Thecc.09G361600 Theobroma cacao
Thecc.10G043800 Theobroma cacao
Thhalv10016841m.g Eutrema salsugineum
Thhalv10017367m.g Eutrema salsugineum
TPR.G17753 Trifolium pratense
TPR.G24962 Trifolium pratense
TWI75G1859 Tripterygium wilfordii
TWI79G1034 Tripterygium wilfordii
unitig_747.g21450 Utricularia gibba
vmacro02895 Vaccinium macrocarpon
vmacro14632 Vaccinium macrocarpon
VMungo0540G1534 Vigna mungo
Zm00001eb276260 Zea mays
Zm00001eb303730 Zea mays

User provided reference genes

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