Gene: AT2G30350

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G30350
  • Transcript Identifier AT2G30350.2
  • Gene Type Coding gene
  • Location Chr2 : 12934237-12935742 : negative

Gene Family Information

  • ID HOM05D002376
  • #Genes/#Species 286/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G30350.2
  • uniprot Q682H4

Descriptions

  • Description Excinuclease ABC, C subunit, N-terminal
  • Computational description Excinuclease ABC, C subunit, N-terminal; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
  • Computational description Excinuclease ABC, C subunit, N-terminal; FUNCTIONS IN: nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Excinuclease ABC, C subunit, N-terminal (InterPro:IPR000305); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0006310
IEA
GOA DatabaseDNA recombination
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0000724
IBA
Gene Ontologydouble-strand break repair via homologous recombination1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004520
IEA
GOA Databaseendodeoxyribonuclease activity
GO:0017108
IEA
GOA Database5'-flap endonuclease activity
GO:0017108
IBA
Gene Ontology5'-flap endonuclease activity1
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0008821
IBA
Gene Ontologycrossover junction endodeoxyribonuclease activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0033557
IEA
GOA DatabaseSlx1-Slx4 complex
GO:0033557
IBA
Gene OntologySlx1-Slx4 complex1
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000305 GIY-YIG endonuclease
IPR035901 GIY-YIG endonuclease superfamily
Mapman id Description
35.1 not assigned.annotated