Gene: Sopen11g027160
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g027160
- Transcript Identifier Sopen11g027160.1
- Gene Type Coding gene
- Location Spenn-ch11 : 62939911-62942157 : positive
Gene Family Information
- ID HOM05D002376
- #Genes/#Species 286/100
- Phylogenetic origin
- ID ORTHO05D008821
- #Genes/#Species 114/88
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen11g027160.1
Descriptions
- Description Putative homolog of mammalian BLOC-1 Subunit 1. Protein - protein interaction with BLOS2 and also with SNX1.Located in endomembrane system and hypothesized to be involved in endomembrane transport. | GCN5L1 family protein | CONTAINS InterPro DOMAIN/s: GCN5-like 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT2G30330 |
GO:0016197 | ISO | PLAZA Integrative Orthology | endosomal transport | AT2G30330 |
GO:0045324 | ISO | PLAZA Integrative Orthology | late endosome to vacuole transport | AT2G30330 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G30330 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0031083 | IEA | InterPro | BLOC-1 complex | |
GO:0005768 | ISO | PLAZA Integrative Orthology | endosome | AT2G30330 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR009395 | Biogenesis of lysosome-related organelles complex 1 subunit 1 |
Mapman id | Description |
---|---|
22.4.2.4.1 | Vesicle trafficking.endocytic trafficking.Retromer-mediated protein recycling.BLOC-1 regulatory complex.component BLOS1 |