Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p22540 Brassica napus
A05p17160 Brassica napus
A06p01600 Brassica napus
A07p09790 Brassica napus
A08p11050 Brassica napus
A09p35840 Brassica napus
Aa31LG6G11820 Aethionema arabicum
Aa31sc167G70 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2664 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1594 Anthoceros agrestis
Actinidia07349 Actinidia chinensis
Actinidia31386 Actinidia chinensis
Actinidia32358 Actinidia chinensis
Actinidia32359 Actinidia chinensis
Ah.14g086140 Amaranthus hybridus
AL1G44620 Arabidopsis lyrata
AL1G64300 Arabidopsis lyrata
Aqoxy1G01461 Aquilegia oxysepala
Aqoxy1G01571 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8TIL4Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9G4NA9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IEPX8R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PK5V4W Arachis hypogaea
AT1G30580 Arabidopsis thaliana
AT1G56050 Arabidopsis thaliana
ATR0165G034 Amborella trichopoda
ATR0165G044 Amborella trichopoda
ATR0763G215 Amborella trichopoda
Atru.chr10.809 Acer truncatum
Atru.chr12.2173 Acer truncatum
AUR62034031 Chenopodium quinoa
AUR62037619 Chenopodium quinoa
AUR62040884 Chenopodium quinoa
AUR62042456 Chenopodium quinoa
BcaB02g10786 Brassica carinata
BcaB03g13823 Brassica carinata
BcaB04g18208 Brassica carinata
BcaC05g25914 Brassica carinata
BcaC05g27082 Brassica carinata
BcaC05g28223 Brassica carinata
BcaC07g37808 Brassica carinata
BcaC08g44232 Brassica carinata
BcaNung05820 Brassica carinata
BolC5t31694H Brassica oleracea
BolC5t33027H Brassica oleracea
BolC6t36838H Brassica oleracea
BolC6t38362H Brassica oleracea
BolC7t42008H Brassica oleracea
BolC8t48197H Brassica oleracea
BraA02t07257Z Brassica rapa
BraA05t20618Z Brassica rapa
BraA07t28770Z Brassica rapa
BraA08t33096Z Brassica rapa
BraA09t39107Z Brassica rapa
C04p48880 Brassica napus
C05p18650 Brassica napus
C05p29650 Brassica napus
C05p42970 Brassica napus
C06p16370 Brassica napus
C06p32400 Brassica napus
C07p15050 Brassica napus
C09p45380 Brassica napus
CAN.G23.12 Capsicum annuum
CAN.G943.35 Capsicum annuum
CANSAT35G0114 Cannabis sativa
CANSAT80G0083 Cannabis sativa
CARHR030030 Cardamine hirsuta
CARHR045770 Cardamine hirsuta
Carub.0001s2884 Capsella rubella
Carub.0001s4464 Capsella rubella
Ca_00847_v3 Cicer arietinum L.
Ca_27307_v3 Cicer arietinum L.
CBR_g32232 Chara braunii
CBR_g41138 Chara braunii
Cc05_g16040 Coffea canephora
Cc09_g07850 Coffea canephora
CDE01G0809 Ceratophyllum demersum
CDE02G4668 Ceratophyllum demersum
CDE05G0356 Ceratophyllum demersum
CDE12G0520 Ceratophyllum demersum
CDE12G0617 Ceratophyllum demersum
Cfa000812 Carpinus fangiana
Cfa002019 Carpinus fangiana
Cfa019434 Carpinus fangiana
Cfa019927 Carpinus fangiana
Cfa026405 Carpinus fangiana
Ciclev10015175m.g Citrus clementina
Ciclev10020166m.g Citrus clementina
CiPaw.09G142100 Carya illinoinensis
CiPaw.12G006300 Carya illinoinensis
ClCG03G006230 Citrullus lanatus
ClCG11G016400 Citrullus lanatus
COL.COLO4_26859 Corchorus olitorius
Cpa.g.c29865 Carica papaya
Cpa.g.c39823 Carica papaya
Cpa.g.c45118 Carica papaya
Cpa.g.c46519 Carica papaya
Cpa.g.sc10.42 Carica papaya
Cpa.g.sc10.44 Carica papaya
Cpa.g.sc166.35 Carica papaya
Cre02.g083600 Chlamydomonas reinhardtii
Cre02.g104900 Chlamydomonas reinhardtii
Cre13.g562150 Chlamydomonas reinhardtii
CsaV3_1G037270 Cucumis sativus L.
CsaV3_4G031850 Cucumis sativus L.
CSS0000547 Camellia sinensis var. sinensis
CSS0003431 Camellia sinensis var. sinensis
CSS0044397 Camellia sinensis var. sinensis
DCAR_003850 Daucus carota
DCAR_007838 Daucus carota
DCAR_013741 Daucus carota
Dinv09121 Davidia involucrata
Dinv10785 Davidia involucrata
Dinv42513 Davidia involucrata
Duzib160G0486 Durio zibethinus
Duzib187G0190 Durio zibethinus
Duzib235G0594 Durio zibethinus
ECA234G3409 Erigeron canadensis
ECA240G2934 Erigeron canadensis
EL10Ac1g00206 Beta vulgaris
EL10Ac8g19550 Beta vulgaris
Eucgr.D00127 Eucalyptus grandis
Eucgr.F03180 Eucalyptus grandis
FAN11G0457 Fragaria x ananassa
FAN11G2615 Fragaria x ananassa
FAN16G1092 Fragaria x ananassa
FAN16G1118 Fragaria x ananassa
FAN21G2661 Fragaria x ananassa
FAN21G3707 Fragaria x ananassa
FAN25G1843 Fragaria x ananassa
FAN25G3799 Fragaria x ananassa
FvH4_3g10200 Fragaria vesca
FvH4_3g15830 Fragaria vesca
Glyma.08G236400 Glycine max
Glyma.09G024800 Glycine max
Glyma.15G130800 Glycine max
Gohir.A04G050966 Gossypium hirsutum
Gohir.A04G051032 Gossypium hirsutum
Gohir.A10G004600 Gossypium hirsutum
Gohir.D02G175450 Gossypium hirsutum
Gohir.D05G330100 Gossypium hirsutum
Gohir.D10G004600 Gossypium hirsutum
Gohir.D10G146500 Gossypium hirsutum
Gohir.D13G065501 Gossypium hirsutum
Gorai.009G353700 Gossypium raimondii
Gorai.011G005000 Gossypium raimondii
GSVIVG01020436001 Vitis vinifera
GSVIVG01021666001 Vitis vinifera
HanXRQChr03g0078111 Helianthus annuus
HanXRQChr15g0482121 Helianthus annuus
HanXRQChr17g0564001 Helianthus annuus
Haze_05847 Corylus avellana
Haze_05855 Corylus avellana
Haze_05856 Corylus avellana
Haze_05861 Corylus avellana
Haze_08554 Corylus avellana
Haze_08556 Corylus avellana
Haze_26434 Corylus avellana
Haze_27258 Corylus avellana
Hma1.2p1_0006F.1_g004590 Hydrangea macrophylla
Hma1.2p1_0067F.1_g036920 Hydrangea macrophylla
Hma1.2p1_0637F.1_g193560 Hydrangea macrophylla
HPP92_005878 Vanilla planifolia
HPP92_015923 Vanilla planifolia
Hund01729 Selenicereus undatus
Hund21565 Selenicereus undatus
Lalb_Chr01g0007181 Lupinus albus
Lalb_Chr15g0088791 Lupinus albus
Lalb_Chr18g0058011 Lupinus albus
Lj1A1161T64 Lonicera japonica
Lj1C905T5 Lonicera japonica
Lj3g0013391 Lotus japonicus
Lj6g0011254 Lotus japonicus
Lsat_1_v5_gn_1_92320 Lactuca sativa
Lsat_1_v5_gn_4_29961 Lactuca sativa
Lsat_1_v5_gn_9_45640 Lactuca sativa
Manes.01G128100 Manihot esculenta
Manes.06G171400 Manihot esculenta
Mapoly0084s0078 Marchantia polymorpha
Mapoly0134s0022 Marchantia polymorpha
MBI02_g07511_MAGBIO Magnolia biondii
MBI02_g25372_MAGBIO Magnolia biondii
MCO12G358 Micromonas commoda
MCO16G421 Micromonas commoda
MD05G1219600 Malus domestica
MD05G1272300 Malus domestica
MD10G1202000 Malus domestica
MD10G1252400 Malus domestica
Medtr2g030335 Medicago truncatula
Medtr2g030370 Medicago truncatula
MELO3C002816.2 Cucumis melo
MELO3C010569.2 Cucumis melo
Migut.H01325 Erythranthe guttata
Migut.H01695 Erythranthe guttata
MSTRG.13062 Avicennia marina
MSTRG.14800 Avicennia marina
Nitab4.5_0000076g0240 Nicotiana tabacum
Nitab4.5_0001749g0040 Nicotiana tabacum
Nitab4.5_0004204g0050 Nicotiana tabacum
Nitab4.5_0004204g0060 Nicotiana tabacum
Nitab4.5_0009317g0020 Nicotiana tabacum
Nitab4.5_0014914g0010 Nicotiana tabacum
Nn3g20144 Nelumbo nucifera
Nn7g37796 Nelumbo nucifera
Oeu051662.1 Olea europaea
Oeu058485.2 Olea europaea
Oeu060308.1 Olea europaea
Os03g0781000 Oryza sativa ssp. japonica
Os08g0199300 Oryza sativa ssp. japonica
Peaxi162Scf00395g00316 Petunia axillaris
Peaxi162Scf00452g00847 Petunia axillaris
PGR031G3731 Punica granatum
PGR083G0156 Punica granatum
PGSC0003DMG402022236 Solanum tuberosum
Phvul.006G127800 Phaseolus vulgaris
Phvul.011G174800 Phaseolus vulgaris
Potri.001G457900 Populus trichocarpa
Potri.001G465900 Populus trichocarpa
Potri.011G143700 Populus trichocarpa
Potri.011G164000 Populus trichocarpa
Pp3c6_25660 Physcomitrium patens
Pp3c7_4400 Physcomitrium patens
PRCOL_00003893 Prasinoderma coloniale
PRCOL_00005588 Prasinoderma coloniale
Prupe.4G091100 Prunus persica
Prupe.4G140300 Prunus persica
Psat1g167280 Pisum sativum
Psat4g169960 Pisum sativum
PSO541G3034 Papaver somniferum
PSO541G5872 Papaver somniferum
PSO675G1031 Papaver somniferum
PSO675G8809 Papaver somniferum
QL04p073898 Quercus lobata
QL05p062565 Quercus lobata
RcHm_v2.0_Chr2g0163541 Rosa chinensis
RcHm_v2.0_Chr3g0491881 Rosa chinensis
RcHm_v2.0_Chr4g0404851 Rosa chinensis
RcHm_v2.0_Chr5g0016421 Rosa chinensis
RcHm_v2.0_Chr5g0026631 Rosa chinensis
RcHm_v2.0_Chr7g0235431 Rosa chinensis
Rhsim02G0162600 Rhododendron simsii
Rhsim06G0238600 Rhododendron simsii
Sabra11G0141000 Salix brachista
Sabra16G0310400 Salix brachista
Sabra16G0316200 Salix brachista
Sc17g0004560 Simmondsia chinensis
Sc20g0002970 Simmondsia chinensis
Sed0019011 Sechium edule
Sed0027588 Sechium edule
SEGI_02864 Sequoiadendron giganteum
SEGI_24789 Sequoiadendron giganteum
SEGI_37679 Sequoiadendron giganteum
SEGI_37813 Sequoiadendron giganteum
SGA_v2.0_scaffold106G30674 Striga asiatica
SGA_v2.0_scaffold713G53502 Striga asiatica
SHI20705 Sapria himalayana
SMO266G0013 Selaginella moellendorffii
SMO367G0264 Selaginella moellendorffii
Solyc02g023970.3 Solanum lycopersicum
Solyc07g066430.3 Solanum lycopersicum
Sopen02g006660 Solanum pennellii
Sopen07g034600 Solanum pennellii
Sp1g26490 Schrenkiella parvula
Sp1g41660 Schrenkiella parvula
TAR624G0291 Trochodendron aralioides
TAR626G1371 Trochodendron aralioides
TAR629G0264 Trochodendron aralioides
THA.LOC104798596 Tarenaya hassleriana
THA.LOC104810259 Tarenaya hassleriana
THA.LOC104812689 Tarenaya hassleriana
Thecc.06G004500 Theobroma cacao
Thecc.07G153200 Theobroma cacao
Thhalv10007733m.g Eutrema salsugineum
Thhalv10011519m.g Eutrema salsugineum
TPR.G26358 Trifolium pratense
TPR.G9402 Trifolium pratense
TWI38G0315 Tripterygium wilfordii
TWI38G1744 Tripterygium wilfordii
TWI63G1031 Tripterygium wilfordii
unitig_21.g20644 Utricularia gibba
unitig_744.g24502 Utricularia gibba
vmacro11661 Vaccinium macrocarpon
VMungo0540G2392 Vigna mungo
VMungo1127G0254 Vigna mungo
VMungo1127G0526 Vigna mungo
Zm00001eb011870 Zea mays
Zm00001eb059620 Zea mays
Zm00001eb070810 Zea mays
Zm00001eb112470 Zea mays
Zm00001eb123290 Zea mays
Zm00001eb213070 Zea mays
Zm00001eb264460 Zea mays
Zm00001eb413580 Zea mays

User provided reference genes

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