Gene: Solyc02g023970.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g023970.3
  • Transcript Identifier Solyc02g023970.3.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 23137976-23150038 : negative

Gene Family Information

  • ID HOM05D002312
  • #Genes/#Species 293/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g023970.3.1
  • uniprot A0A3Q7EY39
  • gene_id Solyc02g023970

Descriptions

  • Description Obg-like ATPase 1 (AHRD V3.3 *** A0A2G2XB41_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1900425
ISO
PLAZA Integrative Orthologynegative regulation of defense response to bacterium Os08g0199300
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G30580
GO:1901001
ISO
PLAZA Integrative Orthologynegative regulation of response to salt stress AT1G30580
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT1G30580

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
ISO
PLAZA Integrative OrthologyGTPase activity Os08g0199300
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G30580
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0043022
IEA
GOA Databaseribosome binding
GO:0043023
IEA
GOA Databaseribosomal large subunit binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
IEA
GOA Databasecytoplasm
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G30580
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G30580
GO:0009536
IEA
GOA Databaseplastid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1
IPR012676 TGS-like
IPR012675 Beta-grasp domain superfamily
IPR013029 YchF, C-terminal domain
IPR006073 GTP binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR041706 YchF, N-terminal
IPR023192 TGS-like domain superfamily
Mapman id Description
35.1 not assigned.annotated