Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p40910 Brassica napus
A03p08830 Brassica napus
A03p08860 Brassica napus
Aa31LG11G11220 Aethionema arabicum
Aa31LG5G14740 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4016 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.3437 Anthoceros agrestis
Actinidia03823 Actinidia chinensis
Actinidia03824 Actinidia chinensis
Actinidia06827 Actinidia chinensis
Actinidia39975 Actinidia chinensis
Actinidia39976 Actinidia chinensis
Actinidia39977 Actinidia chinensis
Ah.06g188740 Amaranthus hybridus
Ah.06g188760 Amaranthus hybridus
Ah.06g188770 Amaranthus hybridus
Ah.13g065840 Amaranthus hybridus
AL3G14240 Arabidopsis lyrata
AL685U10020 Arabidopsis lyrata
AL6G29660 Arabidopsis lyrata
Aqoxy2G03815 Aquilegia oxysepala
Aqoxy5G01434 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.57298L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.76MSW2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BY82ZN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I7KFZB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KCE1UK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T4Q4MP Arachis hypogaea
AT3G04260 Arabidopsis thaliana
AT5G18410 Arabidopsis thaliana
ATR0787G096 Amborella trichopoda
ATR0787G153 Amborella trichopoda
ATR0787G220 Amborella trichopoda
Atru.chr2.1137 Acer truncatum
Atru.chr2.1138 Acer truncatum
AUR62000641 Chenopodium quinoa
AUR62000642 Chenopodium quinoa
AUR62006996 Chenopodium quinoa
AUR62006997 Chenopodium quinoa
BcaB01g05191 Brassica carinata
BcaC09g47811 Brassica carinata
BcaNung04817 Brassica carinata
BNapus_Darmor_BZH_scaffold_78p00800 Brassica napus
BolC1t05755H Brassica oleracea
BolC1t05758H Brassica oleracea
BolC3t13512H Brassica oleracea
BraA01t04526Z Brassica rapa
BraA01t04528Z Brassica rapa
BraA03t10208Z Brassica rapa
BraA03t10210Z Brassica rapa
C03p10320 Brassica napus
CAN.G131.14 Capsicum annuum
CAN.G61.6 Capsicum annuum
CAN.G61.7 Capsicum annuum
CAN.G61.8 Capsicum annuum
CANSAT54G0020 Cannabis sativa
CANSAT54G2391 Cannabis sativa
CARHR078410 Cardamine hirsuta
CARHR194610 Cardamine hirsuta
Carub.0003s0347 Capsella rubella
Carub.0006s1667 Capsella rubella
Ca_09474_v3 Cicer arietinum L.
Ca_09982_v3 Cicer arietinum L.
CBR_g23326 Chara braunii
CBR_g23328 Chara braunii
CBR_g74560 Chara braunii
CBR_g7996 Chara braunii
Cc00_g32050 Coffea canephora
Cc09_g03090 Coffea canephora
Cc10_g10590 Coffea canephora
Cc10_g10600 Coffea canephora
CDE01G0576 Ceratophyllum demersum
CDE01G0796 Ceratophyllum demersum
CDE02G1511 Ceratophyllum demersum
CDE02G2074 Ceratophyllum demersum
CDE02G3044 Ceratophyllum demersum
CDE08G0752 Ceratophyllum demersum
Cfa006304 Carpinus fangiana
Cfa006305 Carpinus fangiana
Ciclev10023441m.g Citrus clementina
Ciclev10023801m.g Citrus clementina
CiPaw.07G076600 Carya illinoinensis
CiPaw.07G076800 Carya illinoinensis
CiPaw.07G076900 Carya illinoinensis
ClCG03G011350 Citrullus lanatus
ClCG03G011370 Citrullus lanatus
ClCG03G011380 Citrullus lanatus
ClCG03G011400 Citrullus lanatus
ClCG03G011410 Citrullus lanatus
COL.COLO4_38179 Corchorus olitorius
COL.COLO4_38180 Corchorus olitorius
Cpa.g.sc51.34 Carica papaya
Cpa.g.sc51.35 Carica papaya
Cpa.g.sc51.36 Carica papaya
Cpa.g.sc51.37 Carica papaya
Cpa.g.sc51.41 Carica papaya
Cre12.g497350 Chlamydomonas reinhardtii
CsaV3_1G040360 Cucumis sativus L.
CsaV3_1G040370 Cucumis sativus L.
CsaV3_1G044940 Cucumis sativus L.
CSS0012562 Camellia sinensis var. sinensis
CSS0028465 Camellia sinensis var. sinensis
CSS0040843 Camellia sinensis var. sinensis
DCAR_005524 Daucus carota
DCAR_005525 Daucus carota
DCAR_027530 Daucus carota
Dinv05783 Davidia involucrata
Dinv05786 Davidia involucrata
Duzib106G1897 Durio zibethinus
ECA233G3880 Erigeron canadensis
ECA238G3638 Erigeron canadensis
EL10Ac4g09786 Beta vulgaris
EL10Ac4g09788 Beta vulgaris
Eucgr.B02168 Eucalyptus grandis
Eucgr.B02169 Eucalyptus grandis
FAN05G1240 Fragaria x ananassa
FAN05G1274 Fragaria x ananassa
FAN09G1447 Fragaria x ananassa
FAN14G3852 Fragaria x ananassa
FAN14G5004 Fragaria x ananassa
FAN14G5351 Fragaria x ananassa
FvH4_6g01330 Fragaria vesca
FvH4_6g01340 Fragaria vesca
FvH4_6g01350 Fragaria vesca
FvH4_6g01352 Fragaria vesca
Glyma.03G253000 Glycine max
Glyma.10G168600 Glycine max
Glyma.19G250600 Glycine max
Glyma.20G221100 Glycine max
Gohir.A11G244201 Gossypium hirsutum
Gohir.A13G102900 Gossypium hirsutum
Gohir.A13G103100 Gossypium hirsutum
Gohir.D11G253550 Gossypium hirsutum
Gohir.D11G253675 Gossypium hirsutum
Gohir.D11G253750 Gossypium hirsutum
Gohir.D13G106101 Gossypium hirsutum
Gohir.D13G106200 Gossypium hirsutum
Gorai.007G272500 Gossypium raimondii
Gorai.007G272700 Gossypium raimondii
Gorai.007G272800 Gossypium raimondii
Gorai.013G119000 Gossypium raimondii
Gorai.013G119100 Gossypium raimondii
GSVIVG01026351001 Vitis vinifera
GSVIVG01026355001 Vitis vinifera
HanXRQChr04g0111671 Helianthus annuus
HanXRQChr14g0434631 Helianthus annuus
Haze_04483 Corylus avellana
Haze_04484 Corylus avellana
Haze_04485 Corylus avellana
Haze_04492 Corylus avellana
Hma1.2p1_0123F.1_g058090 Hydrangea macrophylla
Hma1.2p1_0123F.1_g058100 Hydrangea macrophylla
Hma1.2p1_0123F.1_g058110 Hydrangea macrophylla
Hma1.2p1_0153F.1_g067890 Hydrangea macrophylla
Hma1.2p1_0153F.1_g067900 Hydrangea macrophylla
Hma1.2p1_0153F.1_g067920 Hydrangea macrophylla
Hma1.2p1_0463F.1_g158160 Hydrangea macrophylla
HPP92_013015 Vanilla planifolia
HPP92_013016 Vanilla planifolia
HPP92_013017 Vanilla planifolia
HPP92_013019 Vanilla planifolia
HPP92_025395 Vanilla planifolia
HPP92_025553 Vanilla planifolia
Hund07164 Selenicereus undatus
Hund07166 Selenicereus undatus
Lalb_Chr18g0044191 Lupinus albus
Lalb_Chr18g0044201 Lupinus albus
Lalb_Chr21g0311311 Lupinus albus
Lj1g0020458 Lotus japonicus
Lj2A49G34 Lonicera japonica
Lj2A49G35 Lonicera japonica
Lj2A49T37 Lonicera japonica
Lj2A49T38 Lonicera japonica
Lj2A50T26 Lonicera japonica
Lj2C48G13 Lonicera japonica
Lj5g0010111 Lotus japonicus
Lsat_1_v5_gn_2_16580 Lactuca sativa
Lsat_1_v5_gn_8_2941 Lactuca sativa
Manes.09G145500 Manihot esculenta
Manes.09G145600 Manihot esculenta
Mapoly0031s0123 Marchantia polymorpha
Mapoly0078s0045 Marchantia polymorpha
MD04G1234900 Malus domestica
MD12G1252700 Malus domestica
MD12G1252900 Malus domestica
Medtr1g079525 Medicago truncatula
Medtr7g116590 Medicago truncatula
MELO3C010108.2 Cucumis melo
MELO3C015463.2 Cucumis melo
Migut.C01166 Erythranthe guttata
Migut.F02048 Erythranthe guttata
MSTRG.1472 Avicennia marina
MSTRG.27429 Avicennia marina
Nitab4.5_0000051g0330 Nicotiana tabacum
Nitab4.5_0000494g0100 Nicotiana tabacum
Nitab4.5_0001498g0040 Nicotiana tabacum
Nitab4.5_0006530g0020 Nicotiana tabacum
Nn1g03089 Nelumbo nucifera
Nn3g19861 Nelumbo nucifera
Nn6g32299 Nelumbo nucifera
Oeu001246.1 Olea europaea
Os03g0143800 Oryza sativa ssp. japonica
Os10g0462800 Oryza sativa ssp. japonica
Peaxi162Scf00071g00258 Petunia axillaris
Peaxi162Scf00285g00225 Petunia axillaris
Peaxi162Scf00285g00226 Petunia axillaris
PGR142G2635 Punica granatum
PGR142G3453 Punica granatum
Phvul.006G107600 Phaseolus vulgaris
Phvul.L002432 Phaseolus vulgaris
Potri.013G051200 Populus trichocarpa
Potri.019G025100 Populus trichocarpa
Potri.019G025200 Populus trichocarpa
Pp3c1_8170 Physcomitrium patens
Pp3c21_8020 Physcomitrium patens
Pp3c2_6040 Physcomitrium patens
Prupe.6G354700 Prunus persica
Prupe.6G354800 Prunus persica
Psat0s2603g0080 Pisum sativum
Psat0s3583g0040 Pisum sativum
Psat6g141840 Pisum sativum
PSO017G1794 Papaver somniferum
PSO063G1810 Papaver somniferum
PSO170G6144 Papaver somniferum
PSO674G0074 Papaver somniferum
QL03p032920 Quercus lobata
QL03p033056 Quercus lobata
QL03p033074 Quercus lobata
QL06p040095 Quercus lobata
RcHm_v2.0_Chr1g0330901 Rosa chinensis
RcHm_v2.0_Chr3g0448901 Rosa chinensis
RcHm_v2.0_Chr3g0448911 Rosa chinensis
RcHm_v2.0_Chr3g0448921 Rosa chinensis
Rhsim05G0168900 Rhododendron simsii
Rhsim05G0169000 Rhododendron simsii
Sabra13G0046600 Salix brachista
Sabra19G0034700 Salix brachista
Sabra19G0034800 Salix brachista
Sabra19G0037700 Salix brachista
Sabra19G0037800 Salix brachista
SalBow7G0462 Salvia bowleyana
SalBow7G2659 Salvia bowleyana
Sc09g0001770 Simmondsia chinensis
Sc16g0010030 Simmondsia chinensis
Sed0014107 Sechium edule
Sed0017844 Sechium edule
SEGI_00068 Sequoiadendron giganteum
SEGI_02952 Sequoiadendron giganteum
SEGI_16679 Sequoiadendron giganteum
SEGI_28731 Sequoiadendron giganteum
SEGI_33538 Sequoiadendron giganteum
SEGI_41506 Sequoiadendron giganteum
SGA_v2.0_scaffold52G18996 Striga asiatica
SGA_v2.0_scaffold62G21474 Striga asiatica
SHI14430 Sapria himalayana
SHI14432 Sapria himalayana
SMO348G0052 Selaginella moellendorffii
SMO367G1266 Selaginella moellendorffii
Solyc01g013970.1 Solanum lycopersicum
Solyc01g014000.1 Solanum lycopersicum
Solyc01g015200.1 Solanum lycopersicum
Solyc01g016870.1 Solanum lycopersicum
Solyc01g016920.1 Solanum lycopersicum
Solyc01g016930.1 Solanum lycopersicum
Solyc04g050540.4 Solanum lycopersicum
Solyc11g013280.1 Solanum lycopersicum
Sopen01g022760 Solanum pennellii
Sopen04g021370 Solanum pennellii
Sopen11g008300 Solanum pennellii
Sp3g03170 Schrenkiella parvula
Sp6g25910 Schrenkiella parvula
TAR362G0445 Trochodendron aralioides
TAR365G0274 Trochodendron aralioides
THA.LOC104820753 Tarenaya hassleriana
THA.LOC104820754 Tarenaya hassleriana
Thecc.05G264800 Theobroma cacao
Thecc.05G264900 Theobroma cacao
Thhalv10012457m.g Eutrema salsugineum
Thhalv10020015m.g Eutrema salsugineum
TPR.G31597 Trifolium pratense
TPR.G31600 Trifolium pratense
TWI60G0078 Tripterygium wilfordii
TWI60G1049 Tripterygium wilfordii
unitig_736.g22260 Utricularia gibba
unitig_899.g14420 Utricularia gibba
vmacro19963 Vaccinium macrocarpon
vmacro19964 Vaccinium macrocarpon
vmacro19965 Vaccinium macrocarpon
vmacro19966 Vaccinium macrocarpon
vmacro19967 Vaccinium macrocarpon
vmacro19968 Vaccinium macrocarpon
vmacro19969 Vaccinium macrocarpon
VMungo0540G0745 Vigna mungo
VMungo0720G2591 Vigna mungo
Zm00001eb003550 Zea mays
Zm00001eb046590 Zea mays

User provided reference genes

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