Gene: Carub.0003s0347
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0003s0347
- Transcript Identifier Carub.0003s0347.1
- Gene Type Coding gene
- Location scaffold_3 : 1143613-1147860 : negative
Gene Family Information
- ID HOM05D002281
- #Genes/#Species 296/96
- Phylogenetic origin
- ID ORTHO05D006774
- #Genes/#Species 138/93
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0003s0347.v1.1
- pacid 39242769
- synonym Carubv10012929m.g
Descriptions
- Description PTHR31407//PTHR31407:SF5 - FAMILY NOT NAMED // PLASTID TRANSCRIPTIONALLY ACTIVE 3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030833 | ISO | PLAZA Homology (enrichment) | regulation of actin filament polymerization | HOM05D002281 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0031267 | ISO | PLAZA Homology (enrichment) | small GTPase binding | HOM05D002281 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009508 | ISO | PLAZA Integrative Orthology | plastid chromosome | AT3G04260 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G04260 |
| GO:0042644 | ISO | PLAZA Integrative Orthology | chloroplast nucleoid | AT3G04260 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.6.1.2.2.1 | RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essential co-factor components.component PAP1/TAC3 |