Gene: Solyc04g050540.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g050540.4
  • Transcript Identifier Solyc04g050540.4.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 46751677-46771115 : negative

Gene Family Information

  • ID HOM05D002281
  • #Genes/#Species 296/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g050540.4.1
  • uniprot A0A3Q7GW23
  • gene_id Solyc04g050540

Descriptions

  • Description Pentatricopeptide repeat (AHRD V3.3 *** A0A200PLV2_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030833
ISO
PLAZA Homology (enrichment)regulation of actin filament polymerization HOM05D002281

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0031267
ISO
PLAZA Homology (enrichment)small GTPase binding HOM05D002281

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009508
ISO
PLAZA Integrative Orthologyplastid chromosome AT3G04260
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G04260
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid AT3G04260

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036361 SAP domain superfamily
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR003034 SAP domain
Mapman id Description
15.6.1.2.2.1 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essential co-factor components.component PAP1/TAC3