Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p23270 Brassica napus
A04p07860 Brassica napus
A04p31610 Brassica napus
Aa31LG1G23450 Aethionema arabicum
Aa31LG9G3120 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1564 Anthoceros agrestis
Actinidia17680 Actinidia chinensis
Actinidia33892 Actinidia chinensis
Actinidia38147 Actinidia chinensis
Ah.04g151290 Amaranthus hybridus
Ah.13g076710 Amaranthus hybridus
Ah.16g104020 Amaranthus hybridus
AL4G39510 Arabidopsis lyrata
AL7G42040 Arabidopsis lyrata
Aqoxy2G00277 Aquilegia oxysepala
Aqoxy4G02187 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8SKS1Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.914GI4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MHUR4I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P9D87U Arachis hypogaea
AT2G41430 Arabidopsis thaliana
AT4G14270 Arabidopsis thaliana
ATR0594G170 Amborella trichopoda
Atru.chr1.1249 Acer truncatum
Atru.chr12.124 Acer truncatum
AUR62012323 Chenopodium quinoa
AUR62022964 Chenopodium quinoa
AUR62026143 Chenopodium quinoa
AUR62030391 Chenopodium quinoa
BcaB01g03468 Brassica carinata
BcaB02g08623 Brassica carinata
BcaC01g05337 Brassica carinata
BcaC02g09339 Brassica carinata
BcaC02g12903 Brassica carinata
BcaC07g37611 Brassica carinata
BolC3t15147H Brassica oleracea
BolC4t25732H Brassica oleracea
BolC4t28401H Brassica oleracea
BraA03t11546Z Brassica rapa
BraA04t16474Z Brassica rapa
BraA04t18619Z Brassica rapa
C03p27770 Brassica napus
C04p41500 Brassica napus
C04p69040 Brassica napus
CAN.G1237.26 Capsicum annuum
CAN.G1656.11 Capsicum annuum
CAN.G252.13 Capsicum annuum
CANSAT56G1677 Cannabis sativa
CANSAT80G2732 Cannabis sativa
CARHR136550 Cardamine hirsuta
CARHR220420 Cardamine hirsuta
Carub.0004s1237 Capsella rubella
Carub.0004s2373 Capsella rubella
Carub.0007s2807 Capsella rubella
Ca_06009_v3 Cicer arietinum L.
Ca_08421_v3 Cicer arietinum L.
Ca_27049_v3 Cicer arietinum L.
Cc06_g18450 Coffea canephora
CDE04G2823 Ceratophyllum demersum
CDE06G0538 Ceratophyllum demersum
CDE07G0432 Ceratophyllum demersum
CDE08G0507 Ceratophyllum demersum
CDE08G0586 Ceratophyllum demersum
CDE09G0498 Ceratophyllum demersum
Cfa001247 Carpinus fangiana
Cfa016744 Carpinus fangiana
Cfa016747 Carpinus fangiana
Ciclev10006124m.g Citrus clementina
Ciclev10032949m.g Citrus clementina
Ciclev10033013m.g Citrus clementina
CiPaw.01G302900 Carya illinoinensis
CiPaw.09G043100 Carya illinoinensis
CiPaw.10G036900 Carya illinoinensis
ClCG01G007600 Citrullus lanatus
ClCG04G004160 Citrullus lanatus
ClCG11G005940 Citrullus lanatus
COL.COLO4_21285 Corchorus olitorius
COL.COLO4_25812 Corchorus olitorius
COL.COLO4_25842 Corchorus olitorius
Cpa.g.sc19.111 Carica papaya
Cpa.g.sc197.11 Carica papaya
Cpa.g.sc5.215 Carica papaya
CsaV3_4G022030 Cucumis sativus L.
CsaV3_5G024610 Cucumis sativus L.
CsaV3_6G002060 Cucumis sativus L.
CSS0029123 Camellia sinensis var. sinensis
CSS0042072 Camellia sinensis var. sinensis
DCAR_013620 Daucus carota
DCAR_020532 Daucus carota
DCAR_024798 Daucus carota
DCAR_028559 Daucus carota
Dinv10569 Davidia involucrata
Dinv18690 Davidia involucrata
Dinv21802 Davidia involucrata
Dinv30284 Davidia involucrata
Duzib106G1995 Durio zibethinus
Duzib128G1130 Durio zibethinus
Duzib128G1780 Durio zibethinus
Duzib128G1863 Durio zibethinus
ECA236G0753 Erigeron canadensis
ECA238G1451 Erigeron canadensis
ECA248G1014 Erigeron canadensis
EL10Ac2g04915 Beta vulgaris
EL10Ac3g07173 Beta vulgaris
Eucgr.A02291 Eucalyptus grandis
Eucgr.G03104 Eucalyptus grandis
FAN01G0927 Fragaria x ananassa
FAN02G2615 Fragaria x ananassa
FAN03G0867 Fragaria x ananassa
FAN05G2790 Fragaria x ananassa
FAN06G2085 Fragaria x ananassa
FAN10G1531 Fragaria x ananassa
FAN14G1505 Fragaria x ananassa
FvH4_6g24790 Fragaria vesca
FvH4_7g25400 Fragaria vesca
Glyma.02G260800 Glycine max
Glyma.03G131900 Glycine max
Glyma.04G138600 Glycine max
Glyma.11G149900 Glycine max
Glyma.19G133800 Glycine max
Gohir.A05G332200 Gossypium hirsutum
Gohir.A13G002900 Gossypium hirsutum
Gohir.A13G013400 Gossypium hirsutum
Gohir.D04G070900 Gossypium hirsutum
Gohir.D13G002800 Gossypium hirsutum
Gohir.D13G014500 Gossypium hirsutum
Gorai.012G079800 Gossypium raimondii
Gorai.013G002700 Gossypium raimondii
Gorai.013G015700 Gossypium raimondii
GSVIVG01000857001 Vitis vinifera
GSVIVG01032732001 Vitis vinifera
GSVIVG01033561001 Vitis vinifera
HanXRQChr01g0008281 Helianthus annuus
HanXRQChr04g0124951 Helianthus annuus
HanXRQChr07g0203511 Helianthus annuus
Haze_03109 Corylus avellana
Haze_17303 Corylus avellana
Haze_19757 Corylus avellana
Haze_19759 Corylus avellana
Hma1.2p1_0056F.1_g031690 Hydrangea macrophylla
Hma1.2p1_1687F.1_g297530 Hydrangea macrophylla
HPP92_012480 Vanilla planifolia
HPP92_013848 Vanilla planifolia
HPP92_013862 Vanilla planifolia
HPP92_014155 Vanilla planifolia
HPP92_014175 Vanilla planifolia
Hund13328 Selenicereus undatus
Hund13523 Selenicereus undatus
Hund19120 Selenicereus undatus
Lalb_Chr04g0250361 Lupinus albus
Lalb_Chr20g0110291 Lupinus albus
Lalb_Chr25g0282461 Lupinus albus
Lj1g0019573 Lotus japonicus
Lj1P1118T20 Lonicera japonica
Lj1P1121T18 Lonicera japonica
Lj2P392T38 Lonicera japonica
Lj3g0009113 Lotus japonicus
LjContig00357g0021340 Lotus japonicus
Lsat_1_v5_gn_2_125820 Lactuca sativa
Lsat_1_v5_gn_5_160961 Lactuca sativa
Lsat_1_v5_gn_8_83020 Lactuca sativa
Manes.04G163900 Manihot esculenta
Manes.07G136300 Manihot esculenta
Manes.08G055000 Manihot esculenta
Manes.09G010100 Manihot esculenta
Mapoly0002s0342 Marchantia polymorpha
Mapoly0045s0059 Marchantia polymorpha
MBI03_g41402_MAGBIO Magnolia biondii
MBI03_g43457_MAGBIO Magnolia biondii
MD01G1160300 Malus domestica
MD07G1228500 Malus domestica
MD14G1081500 Malus domestica
Medtr3g023110 Medicago truncatula
Medtr5g083690 Medicago truncatula
Medtr7g090630 Medicago truncatula
MELO3C005136.2 Cucumis melo
MELO3C014211.2 Cucumis melo
MELO3C019981.2 Cucumis melo
Migut.F00617 Erythranthe guttata
Migut.J01696 Erythranthe guttata
Migut.K00114 Erythranthe guttata
MSTRG.19831 Avicennia marina
MSTRG.26141 Avicennia marina
MSTRG.6396 Avicennia marina
MSTRG.8913 Avicennia marina
Nitab4.5_0000562g0020 Nicotiana tabacum
Nitab4.5_0000677g0040 Nicotiana tabacum
Nitab4.5_0001291g0080 Nicotiana tabacum
Nitab4.5_0001618g0080 Nicotiana tabacum
Nitab4.5_0002854g0070 Nicotiana tabacum
Nitab4.5_0008674g0020 Nicotiana tabacum
Nn2g11033 Nelumbo nucifera
Nn2g14871 Nelumbo nucifera
Nn2g14878 Nelumbo nucifera
Nn2g15049 Nelumbo nucifera
Nn7g36454 Nelumbo nucifera
Oeu008185.2 Olea europaea
Oeu039378.1 Olea europaea
Oeu042056.3 Olea europaea
Oeu049505.1 Olea europaea
Os03g0353400 Oryza sativa ssp. japonica
Os05g0344200 Oryza sativa ssp. japonica
Os07g0661400 Oryza sativa ssp. japonica
Peaxi162Scf00130g01128 Petunia axillaris
Peaxi162Scf00284g00234 Petunia axillaris
Peaxi162Scf01315g00112 Petunia axillaris
PGR031G1848 Punica granatum
PGR142G1630 Punica granatum
PGSC0003DMG400007624 Solanum tuberosum
PGSC0003DMG400023945 Solanum tuberosum
PGSC0003DMG400029848 Solanum tuberosum
Phvul.001G127900 Phaseolus vulgaris
Phvul.005G033200 Phaseolus vulgaris
Phvul.008G219700 Phaseolus vulgaris
Potri.001G023100 Populus trichocarpa
Potri.003G202500 Populus trichocarpa
Potri.006G044600 Populus trichocarpa
Potri.008G074600 Populus trichocarpa
Potri.010G182800 Populus trichocarpa
Potri.016G041600 Populus trichocarpa
Pp3c24_6320 Physcomitrium patens
Pp3c8_13720 Physcomitrium patens
Prupe.2G258200 Prunus persica
Prupe.7G049200 Prunus persica
Psat3g075720 Pisum sativum
Psat5g185000 Pisum sativum
Psat5g213440 Pisum sativum
PSO017G2937 Papaver somniferum
PSO339G0109 Papaver somniferum
PSO349G0302 Papaver somniferum
PSO384G4363 Papaver somniferum
QL04p013206 Quercus lobata
QL07p004841 Quercus lobata
QL08p064088 Quercus lobata
QL08p064121 Quercus lobata
RcHm_v2.0_Chr1g0371351 Rosa chinensis
RcHm_v2.0_Chr2g0124241 Rosa chinensis
Rhsim03G0148500 Rhododendron simsii
Rhsim04G0108400 Rhododendron simsii
Sabra01G0017400 Salix brachista
Sabra03G0149600 Salix brachista
Sabra06G0030800 Salix brachista
Sabra10G0140200 Salix brachista
SalBow1G7629 Salvia bowleyana
SalBow3G0904 Salvia bowleyana
SalBow6G0458 Salvia bowleyana
Sc11g0005540 Simmondsia chinensis
Sc19g0008420 Simmondsia chinensis
Sc25g0005390 Simmondsia chinensis
Sed0000241 Sechium edule
Sed0006350 Sechium edule
Sed0013824 Sechium edule
Sed0014677 Sechium edule
Sed0027929 Sechium edule
SEGI_10877 Sequoiadendron giganteum
SEGI_35540 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30344 Striga asiatica
SGA_v2.0_scaffold273G46407 Striga asiatica
SGA_v2.0_scaffold44G16651 Striga asiatica
SGA_v2.0_scaffold69G23135 Striga asiatica
SMO137G0126 Selaginella moellendorffii
Solyc04g017690.3 Solanum lycopersicum
Solyc10g079820.2 Solanum lycopersicum
Sopen04g008770 Solanum pennellii
Sopen06g016260 Solanum pennellii
Sopen10g030430 Solanum pennellii
Sp4g23700 Schrenkiella parvula
Sp7g12280 Schrenkiella parvula
TAR623G0368 Trochodendron aralioides
TAR623G1259 Trochodendron aralioides
TAR623G1458 Trochodendron aralioides
TAR623G1589 Trochodendron aralioides
TAR623G1745 Trochodendron aralioides
TAR633G2515 Trochodendron aralioides
TAR636G1645 Trochodendron aralioides
TAR636G2431 Trochodendron aralioides
THA.LOC104803284 Tarenaya hassleriana
THA.LOC104816525 Tarenaya hassleriana
THA.LOC104819116 Tarenaya hassleriana
Thecc.04G137300 Theobroma cacao
Thecc.05G144400 Theobroma cacao
Thecc.10G008600 Theobroma cacao
Thhalv10017353m.g Eutrema salsugineum
Thhalv10026475m.g Eutrema salsugineum
TPR.G31985 Trifolium pratense
TPR.G323 Trifolium pratense
TPR.G32722 Trifolium pratense
TWI09G1319 Tripterygium wilfordii
TWI53G0072 Tripterygium wilfordii
TWI73G0816 Tripterygium wilfordii
TWI74G1337 Tripterygium wilfordii
unitig_37.g12465 Utricularia gibba
unitig_46.g18738 Utricularia gibba
vmacro06913 Vaccinium macrocarpon
vmacro09035 Vaccinium macrocarpon
VMungo0647G1981 Vigna mungo
VMungo1080G0442 Vigna mungo
VMungo1383G3048 Vigna mungo
Zm00001eb110880 Zea mays
Zm00001eb286310 Zea mays
Zm00001eb329900 Zea mays
Zm00001eb394600 Zea mays
Zm00001eb400880 Zea mays

User provided reference genes

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