Gene: Sopen04g008770

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g008770
  • Transcript Identifier Sopen04g008770.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 7884066-7884656 : negative

Gene Family Information

  • ID HOM05D002215
  • #Genes/#Species 303/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g008770.1

Descriptions

  • Description Encodes hydrophilic protein lacking Cys residues that is expressed in response to drought stress, light stress and treatment with plant-growth-promoting rhizobacteria (Paenibacillus polymyxa), possibly revealing a connection between responses to biotic and abiotic stress. Also identified as a CTC Interacting Domain (CID) protein in a yeast two hybrid screen using the PAB2 protein as bait. Contains PAM2 like domain which mediates interaction with PABC domain in PAB2. | EARLY RESPONSIVE TO DEHYDRATION 15 (ERD15) | FUNCTIONS IN: protein binding | INVOLVED IN: response to water deprivation, response to high light intensity, response to bacterium | LOCATED IN: cytoplasm | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | BEST Arabidopsis thaliana protein match is: unknown protein .
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010196
ISO
PLAZA Integrative Orthologynonphotochemical quenching AT2G41430
GO:0009617
ISO
PLAZA Integrative Orthologyresponse to bacterium AT2G41430
GO:0009644
ISO
PLAZA Integrative Orthologyresponse to high light intensity AT2G41430

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G41430

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042651
ISO
PLAZA Integrative Orthologythylakoid membrane AT2G41430

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009818 Ataxin-2, C-terminal
IPR040414 PAM2-containing protein CID1/CID2
Mapman id Description
35.1 not assigned.annotated