Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p22300 Brassica napus
A03p34080 Brassica napus
A04p30240 Brassica napus
Aa31LG5G15750 Aethionema arabicum
Aa31LG5G19810 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4848 Anthoceros agrestis
Actinidia02912 Actinidia chinensis
Actinidia13182 Actinidia chinensis
Actinidia19793 Actinidia chinensis
Ah.06g189280 Amaranthus hybridus
Ah.06g189290 Amaranthus hybridus
AL3G15720 Arabidopsis lyrata
AL4G37350 Arabidopsis lyrata
AL6G39520 Arabidopsis lyrata
Aqoxy1G00829 Aquilegia oxysepala
Aqoxy5G00511 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A3AWFZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FCQ45K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KXA9QZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NHE1TC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W8JJXT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YTA3II Arachis hypogaea
AT2G39805 Arabidopsis thaliana
AT3G05280 Arabidopsis thaliana
AT5G27490 Arabidopsis thaliana
ATR0559G126 Amborella trichopoda
ATR0706G136 Amborella trichopoda
Atru.chr12.302 Acer truncatum
Atru.chr12.306 Acer truncatum
Atru.chr12.307 Acer truncatum
Atru.chr12.309 Acer truncatum
Atru.chr12.338 Acer truncatum
Atru.chr2.413 Acer truncatum
AUR62012147 Chenopodium quinoa
AUR62031135 Chenopodium quinoa
AUR62036539 Chenopodium quinoa
AUR62040688 Chenopodium quinoa
BcaB01g03572 Brassica carinata
BcaB04g19273 Brassica carinata
BcaB04g19274 Brassica carinata
BcaB04g21452 Brassica carinata
BcaC01g05463 Brassica carinata
BcaC05g30016 Brassica carinata
BcaC05g30139 Brassica carinata
BNapus_Darmor_BZH_scaffold_114p00220 Brassica napus
BolC1t05704H Brassica oleracea
BolC3t15026H Brassica oleracea
BolC3t16428H Brassica oleracea
BolC4t28261H Brassica oleracea
BolC5t34851H Brassica oleracea
BraA03t11462Z Brassica rapa
BraA03t12582Z Brassica rapa
BraA04t18484Z Brassica rapa
BraA05t23021Z Brassica rapa
BraSC132t45514Z Brassica rapa
C03p26400 Brassica napus
C03p41470 Brassica napus
C04p67620 Brassica napus
C05p61910 Brassica napus
CAN.G1077.16 Capsicum annuum
CAN.G1184.5 Capsicum annuum
CANSAT54G1741 Cannabis sativa
CANSAT56G4043 Cannabis sativa
CANSAT64G2080 Cannabis sativa
CARHR079620 Cardamine hirsuta
CARHR134690 Cardamine hirsuta
Carub.0003s0453 Capsella rubella
Carub.0004s2191 Capsella rubella
Ca_05907_v3 Cicer arietinum L.
Ca_09351_v3 Cicer arietinum L.
Ca_09352_v3 Cicer arietinum L.
Ca_09360_v3 Cicer arietinum L.
Ca_09361_v3 Cicer arietinum L.
CBR_g1001 Chara braunii
CBR_g3522 Chara braunii
Cc02_g07330 Coffea canephora
Cc02_g33510 Coffea canephora
Cc05_g04230 Coffea canephora
CDE03G0226 Ceratophyllum demersum
CDE04G1806 Ceratophyllum demersum
CDE07G0618 Ceratophyllum demersum
Cfa001415 Carpinus fangiana
Cfa015110 Carpinus fangiana
Cfa026924 Carpinus fangiana
Ciclev10002100m.g Citrus clementina
Ciclev10032419m.g Citrus clementina
CiPaw.01G292200 Carya illinoinensis
CiPaw.02G187300 Carya illinoinensis
CiPaw.05G163100 Carya illinoinensis
ClCG03G016960 Citrullus lanatus
ClCG11G006590 Citrullus lanatus
COL.COLO4_13480 Corchorus olitorius
COL.COLO4_25522 Corchorus olitorius
Cpa.g.sc48.41 Carica papaya
Cpa.g.sc776.6 Carica papaya
Cre17.g722700 Chlamydomonas reinhardtii
CsaV3_1G038980 Cucumis sativus L.
CsaV3_6G001420 Cucumis sativus L.
CSS0001800 Camellia sinensis var. sinensis
CSS0002569 Camellia sinensis var. sinensis
CSS0023450 Camellia sinensis var. sinensis
DCAR_022180 Daucus carota
DCAR_024872 Daucus carota
DCAR_027588 Daucus carota
Dinv16263 Davidia involucrata
Dinv23946 Davidia involucrata
Dinv40279 Davidia involucrata
Duzib106G0506 Durio zibethinus
Duzib106G0565 Durio zibethinus
Duzib106G1433 Durio zibethinus
Duzib106G1630 Durio zibethinus
Duzib106G1704 Durio zibethinus
Duzib114G0689 Durio zibethinus
Duzib177G0896 Durio zibethinus
ECA233G1873 Erigeron canadensis
ECA238G2130 Erigeron canadensis
ECA246G2650 Erigeron canadensis
EL10Ac2g04688 Beta vulgaris
EL10Ac4g09344 Beta vulgaris
Eucgr.G02991 Eucalyptus grandis
Eucgr.H04483 Eucalyptus grandis
FAN01G0841 Fragaria x ananassa
FAN02G1310 Fragaria x ananassa
FAN03G2328 Fragaria x ananassa
FAN05G1483 Fragaria x ananassa
FAN05G4253 Fragaria x ananassa
FAN06G3391 Fragaria x ananassa
FAN06G4322 Fragaria x ananassa
FAN09G0634 Fragaria x ananassa
FAN10G0083 Fragaria x ananassa
FAN14G1729 Fragaria x ananassa
FAN14G5292 Fragaria x ananassa
FvH4_6g05750 Fragaria vesca
FvH4_7g23450 Fragaria vesca
Glyma.02G251200 Glycine max
Glyma.03G238400 Glycine max
Glyma.10G154800 Glycine max
Glyma.14G065500 Glycine max
Glyma.19G235900 Glycine max
Glyma.20G233500 Glycine max
Gohir.A05G302300 Gossypium hirsutum
Gohir.A05G347300 Gossypium hirsutum
Gohir.A10G223500 Gossypium hirsutum
Gohir.A11G264400 Gossypium hirsutum
Gohir.A13G173700 Gossypium hirsutum
Gohir.D04G065000 Gossypium hirsutum
Gohir.D05G301800 Gossypium hirsutum
Gohir.D10G235900 Gossypium hirsutum
Gohir.D11G274600 Gossypium hirsutum
Gohir.D13G179400 Gossypium hirsutum
Gorai.007G296400 Gossypium raimondii
Gorai.009G319900 Gossypium raimondii
Gorai.011G269800 Gossypium raimondii
Gorai.012G073100 Gossypium raimondii
Gorai.013G204700 Gossypium raimondii
GSVIVG01000042001 Vitis vinifera
GSVIVG01016466001 Vitis vinifera
GSVIVG01023342001 Vitis vinifera
GSVIVG01036834001 Vitis vinifera
HanXRQChr08g0221211 Helianthus annuus
HanXRQChr14g0448761 Helianthus annuus
HanXRQChr15g0473061 Helianthus annuus
Haze_01563 Corylus avellana
Haze_17129 Corylus avellana
Hma1.2p1_0033F.1_g020140 Hydrangea macrophylla
Hma1.2p1_0039F.1_g024690 Hydrangea macrophylla
HPP92_003399 Vanilla planifolia
HPP92_003418 Vanilla planifolia
HPP92_006343 Vanilla planifolia
HPP92_024134 Vanilla planifolia
Hund07065 Selenicereus undatus
Hund13800 Selenicereus undatus
Hund16051 Selenicereus undatus
Hund21242 Selenicereus undatus
Lalb_Chr02g0148281 Lupinus albus
Lalb_Chr10g0104771 Lupinus albus
Lalb_Chr18g0045591 Lupinus albus
Lj1g0010880 Lotus japonicus
Lj1g0022131 Lotus japonicus
Lj5A537T14 Lonicera japonica
Lj5C537T3 Lonicera japonica
Lj8C78T3 Lonicera japonica
Lj9C31T1 Lonicera japonica
LjContig00141g0016830 Lotus japonicus
Lsat_1_v5_gn_2_87721 Lactuca sativa
Lsat_1_v5_gn_3_98040 Lactuca sativa
Lsat_1_v5_gn_5_136000 Lactuca sativa
Lsat_1_v5_gn_8_14680 Lactuca sativa
Manes.07G120704 Manihot esculenta
Manes.08G121400 Manihot esculenta
Manes.09G166400 Manihot esculenta
Manes.10G024700 Manihot esculenta
Mapoly0005s0055 Marchantia polymorpha
MBI14_g09011_MAGBIO Magnolia biondii
MBI17_g13558_MAGBIO Magnolia biondii
MCO12G418 Micromonas commoda
MD01G1140300 Malus domestica
MD04G1206000 Malus domestica
MD07G1204600 Malus domestica
MD12G1220100 Malus domestica
Medtr3g069150 Medicago truncatula
Medtr3g069170 Medicago truncatula
Medtr5g081040 Medicago truncatula
Medtr7g113620 Medicago truncatula
MELO3C008246.2 Cucumis melo
MELO3C015325.2 Cucumis melo
Migut.F01287 Erythranthe guttata
Migut.I00760 Erythranthe guttata
MSTRG.22749 Avicennia marina
MSTRG.261 Avicennia marina
MSTRG.8286 Avicennia marina
Nitab4.5_0000987g0040 Nicotiana tabacum
Nitab4.5_0005388g0090 Nicotiana tabacum
Nitab4.5_0008497g0010 Nicotiana tabacum
Nitab4.5_0008497g0020 Nicotiana tabacum
Nitab4.5_0008677g0010 Nicotiana tabacum
Nn1g02215 Nelumbo nucifera
Nn2g11249 Nelumbo nucifera
Nn2g13497 Nelumbo nucifera
Nn3g20336 Nelumbo nucifera
Nn4g26240 Nelumbo nucifera
Oeu001519.1 Olea europaea
Oeu029692.2 Olea europaea
Os01g0610500 Oryza sativa ssp. japonica
Os05g0455800 Oryza sativa ssp. japonica
Peaxi162Scf00037g00230 Petunia axillaris
Peaxi162Scf00164g01416 Petunia axillaris
Peaxi162Scf00658g00313 Petunia axillaris
PGR031G0270 Punica granatum
PGR083G2895 Punica granatum
PGR142G4126 Punica granatum
PGSC0003DMG400027135 Solanum tuberosum
PGSC0003DMG400028610 Solanum tuberosum
Phvul.001G237000 Phaseolus vulgaris
Phvul.006G092500 Phaseolus vulgaris
Phvul.007G180400 Phaseolus vulgaris
Phvul.008G230200 Phaseolus vulgaris
Potri.005G033900 Populus trichocarpa
Potri.008G060300 Populus trichocarpa
Potri.010G198100 Populus trichocarpa
Potri.010G198300 Populus trichocarpa
Potri.013G023400 Populus trichocarpa
Pp3c1_31750 Physcomitrium patens
Pp3c1_31760 Physcomitrium patens
Pp3c4_14200 Physcomitrium patens
PRCOL_00001434 Prasinoderma coloniale
Prupe.2G240900 Prunus persica
Prupe.6G326800 Prunus persica
Psat2g038920 Pisum sativum
Psat3g010720 Pisum sativum
Psat5g128720 Pisum sativum
PSO017G1346 Papaver somniferum
PSO063G5958 Papaver somniferum
PSO339G3649 Papaver somniferum
PSO384G4711 Papaver somniferum
QL03p041970 Quercus lobata
QL08p061675 Quercus lobata
RcHm_v2.0_Chr1g0368591 Rosa chinensis
RcHm_v2.0_Chr3g0454661 Rosa chinensis
Rhsim03G0136700 Rhododendron simsii
Rhsim05G0142500 Rhododendron simsii
Rhsim09G0168000 Rhododendron simsii
Rhsim09G0168900 Rhododendron simsii
Sabra05G0035900 Salix brachista
Sabra08G0044400 Salix brachista
Sabra10G0152600 Salix brachista
SalBow2G0074 Salvia bowleyana
SalBow6G3204 Salvia bowleyana
SalBow6G3476 Salvia bowleyana
Sc09g0003210 Simmondsia chinensis
Sc10g0001880 Simmondsia chinensis
Sed0003628 Sechium edule
Sed0004716 Sechium edule
Sed0012888 Sechium edule
SEGI_37536 Sequoiadendron giganteum
SEGI_40211 Sequoiadendron giganteum
SEGI_41301 Sequoiadendron giganteum
SGA_v2.0_scaffold2G00987 Striga asiatica
SGA_v2.0_scaffold37G14761 Striga asiatica
SHI03706 Sapria himalayana
SMO304G0127 Selaginella moellendorffii
Solyc01g098900.3 Solanum lycopersicum
Solyc05g052930.3 Solanum lycopersicum
Sopen01g042440 Solanum pennellii
Sopen05g031450 Solanum pennellii
Sp2g20700 Schrenkiella parvula
Sp3g04130 Schrenkiella parvula
Sp4g22090 Schrenkiella parvula
TAR362G0444 Trochodendron aralioides
TAR365G0117 Trochodendron aralioides
TAR633G0599 Trochodendron aralioides
TAR633G1303 Trochodendron aralioides
TAR636G1215 Trochodendron aralioides
TAR636G1286 Trochodendron aralioides
THA.LOC104802804 Tarenaya hassleriana
THA.LOC104808815 Tarenaya hassleriana
Thecc.05G304600 Theobroma cacao
Thecc.10G034500 Theobroma cacao
Thhalv10004745m.g Eutrema salsugineum
Thhalv10017061m.g Eutrema salsugineum
Thhalv10021283m.g Eutrema salsugineum
TPR.G10328 Trifolium pratense
TPR.G25857 Trifolium pratense
TPR.G33220 Trifolium pratense
TWI12G1165 Tripterygium wilfordii
TWI15G0806 Tripterygium wilfordii
TWI38G1695 Tripterygium wilfordii
TWI56G1185 Tripterygium wilfordii
unitig_0.g1112 Utricularia gibba
unitig_27.g25068 Utricularia gibba
vmacro07036 Vaccinium macrocarpon
vmacro10211 Vaccinium macrocarpon
vmacro19628 Vaccinium macrocarpon
VMungo0540G2070 Vigna mungo
VMungo0647G2156 Vigna mungo
VMungo0720G2426 Vigna mungo
VMungo1383G3669 Vigna mungo
Zm00001eb161830 Zea mays
Zm00001eb289530 Zea mays
Zm00001eb358000 Zea mays

User provided reference genes

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