Gene: AT3G05280
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G05280
- Transcript Identifier AT3G05280.1
- Gene Type Coding gene
- Location Chr3 : 1503992-1505554 : negative
Gene Family Information
- ID HOM05D002081
- #Genes/#Species 320/100
- Phylogenetic origin
- ID ORTHO05D002088
- #Genes/#Species 318/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G05280.1
- uniprot Q8GWB3
Descriptions
- Description Integral membrane Yip1 family protein
- Computational description Integral membrane Yip1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Yip1 domain (InterPro:IPR006977); BEST Arabidopsis thaliana protein match is: Integral membrane Yip1 family protein (TAIR:AT5G27490.1); Has 519 Blast hits to 518 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 224; Fungi - 115; Plants - 92; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016192 | IEA | Gene Ontology | vesicle-mediated transport | |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031267 | IEA | Gene Ontology | small GTPase binding | |
| GO:0031267 | IEA | InterPro | small GTPase binding | |
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005794 | IDA IEA | GOA Database | Golgi apparatus | |
| GO:0005794 | HDA IBA | Gene Ontology | Golgi apparatus | 2 3 |
| GO:0005794 | IEA | InterPro | Golgi apparatus | |
| GO:0005829 | IDA | GOA Database | cytosol | |
| GO:0005829 | HDA | Gene Ontology | cytosol | 4 |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IEA | InterPro | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 22.5.3.2.3 | Vesicle trafficking.exocytic trafficking.secretory vesicle trafficking.ECHIDNA-YIP trafficking complex.component YIP5 |