Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p07680 Brassica napus
A03p12200 Brassica napus
A09p54750 Brassica napus
A10p15750 Brassica napus
Aa31LG11G250 Aethionema arabicum
Aa31LG11G290 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2653 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2664 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1306 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1890 Anthoceros agrestis
Actinidia14800 Actinidia chinensis
Actinidia23208 Actinidia chinensis
Actinidia23213 Actinidia chinensis
Actinidia23869 Actinidia chinensis
Actinidia32621 Actinidia chinensis
Actinidia34475 Actinidia chinensis
Actinidia38392 Actinidia chinensis
Actinidia39683 Actinidia chinensis
Ah.08g215230 Amaranthus hybridus
Ah.15g096250 Amaranthus hybridus
Ah.15g096260 Amaranthus hybridus
AL8G34690 Arabidopsis lyrata
AL8G34750 Arabidopsis lyrata
Aqoxy1G01307 Aquilegia oxysepala
Aqoxy2G00822 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.60GRLQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.99AA0S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H18R60 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RZ6BDN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S6TU68 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S7G6UF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WA30K5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z7E5WK Arachis hypogaea
AT5G58470 Arabidopsis thaliana
AT5G58510 Arabidopsis thaliana
ATR0174G006 Amborella trichopoda
ATR0174G009 Amborella trichopoda
Atru.chr3.4131 Acer truncatum
Atru.chr3.4154 Acer truncatum
AUR62001888 Chenopodium quinoa
AUR62009684 Chenopodium quinoa
AUR62009695 Chenopodium quinoa
AUR62036251 Chenopodium quinoa
AUR62036252 Chenopodium quinoa
BcaB01g04519 Brassica carinata
BcaB01g04520 Brassica carinata
BcaB05g22434 Brassica carinata
BcaB08g36182 Brassica carinata
BcaB08g36187 Brassica carinata
BcaC01g04152 Brassica carinata
BcaC03g14089 Brassica carinata
BolC2t07445H Brassica oleracea
BolC3t13874H Brassica oleracea
BolC3t13875H Brassica oleracea
BolC9t53947H Brassica oleracea
BolC9t57305H Brassica oleracea
BolC9t57892H Brassica oleracea
BolC9t57903H Brassica oleracea
BraA02t05843Z Brassica rapa
BraA03t10531Z Brassica rapa
BraA10t43645Z Brassica rapa
BraA10t43651Z Brassica rapa
C02p11700 Brassica napus
C02p13300 Brassica napus
C02p38030 Brassica napus
C03p14280 Brassica napus
C03p14290 Brassica napus
C03p14310 Brassica napus
C04p55240 Brassica napus
C09p44360 Brassica napus
C09p50360 Brassica napus
C09p50470 Brassica napus
CAN.G1095.17 Capsicum annuum
CAN.G741.43 Capsicum annuum
CANSAT54G3012 Cannabis sativa
CARHR272300 Cardamine hirsuta
CARHR272340 Cardamine hirsuta
Carub.0008s1906 Capsella rubella
Carub.0008s1910 Capsella rubella
Ca_05091_v3 Cicer arietinum L.
Ca_14990_v3 Cicer arietinum L.
Ca_14994_v3 Cicer arietinum L.
Ca_30101_v3 Cicer arietinum L.
CBR_g17146 Chara braunii
CBR_g32390 Chara braunii
Cc01_g14670 Coffea canephora
CDE04G0201 Ceratophyllum demersum
CDE06G0527 Ceratophyllum demersum
CDE08G0674 Ceratophyllum demersum
CDE12G0844 Ceratophyllum demersum
Cfa011748 Carpinus fangiana
Cfa011749 Carpinus fangiana
Cfa011758 Carpinus fangiana
Ciclev10027766m.g Citrus clementina
CiPaw.13G071900 Carya illinoinensis
CiPaw.13G072000 Carya illinoinensis
CiPaw.14G055200 Carya illinoinensis
ClCG03G000290 Citrullus lanatus
ClCG03G000460 Citrullus lanatus
COL.COLO4_11121 Corchorus olitorius
COL.COLO4_11127 Corchorus olitorius
Cpa.g.sc2.376 Carica papaya
Cpa.g.sc2.385 Carica papaya
Cpa.g.sc2.386 Carica papaya
Cre04.g228000 Chlamydomonas reinhardtii
CsaV3_1G036460 Cucumis sativus L.
CsaV3_1G036630 Cucumis sativus L.
CSS0000627 Camellia sinensis var. sinensis
CSS0002014 Camellia sinensis var. sinensis
CSS0014057 Camellia sinensis var. sinensis
CSS0015510 Camellia sinensis var. sinensis
CSS0015957 Camellia sinensis var. sinensis
CSS0018399 Camellia sinensis var. sinensis
CSS0020954 Camellia sinensis var. sinensis
CSS0025735 Camellia sinensis var. sinensis
CSS0025945 Camellia sinensis var. sinensis
CSS0027541 Camellia sinensis var. sinensis
CSS0028239 Camellia sinensis var. sinensis
CSS0038912 Camellia sinensis var. sinensis
CSS0042328 Camellia sinensis var. sinensis
CSS0042911 Camellia sinensis var. sinensis
CSS0049450 Camellia sinensis var. sinensis
DCAR_007354 Daucus carota
DCAR_018219 Daucus carota
Dinv09661 Davidia involucrata
Dinv28678 Davidia involucrata
Dinv28685 Davidia involucrata
Duzib150G0116 Durio zibethinus
Duzib168G0356 Durio zibethinus
Duzib168G1938 Durio zibethinus
Duzib170G0382 Durio zibethinus
ECA247G1661 Erigeron canadensis
ECA248G0185 Erigeron canadensis
EL10Ac7g15893 Beta vulgaris
EL10Ac7g15904 Beta vulgaris
Eucgr.B02225 Eucalyptus grandis
FAN11G3559 Fragaria x ananassa
FAN11G3897 Fragaria x ananassa
FAN16G1479 Fragaria x ananassa
FAN16G2984 Fragaria x ananassa
FAN21G0003 Fragaria x ananassa
FAN21G1045 Fragaria x ananassa
FAN25G3060 Fragaria x ananassa
FvH4_3g39400 Fragaria vesca
FvH4_3g39510 Fragaria vesca
Glyma.02G230600 Glycine max
Glyma.11G165000 Glycine max
Glyma.11G165900 Glycine max
Glyma.14G197700 Glycine max
Glyma.18G058200 Glycine max
Glyma.18G058700 Glycine max
Gohir.A03G026200 Gossypium hirsutum
Gohir.A03G026400 Gossypium hirsutum
Gohir.A03G026800 Gossypium hirsutum
Gohir.A05G108332 Gossypium hirsutum
Gohir.A13G234000 Gossypium hirsutum
Gohir.D03G141700 Gossypium hirsutum
Gohir.D03G142100 Gossypium hirsutum
Gohir.D03G142300 Gossypium hirsutum
Gohir.D05G108500 Gossypium hirsutum
Gohir.D13G239600 Gossypium hirsutum
Gorai.003G148700 Gossypium raimondii
Gorai.003G149100 Gossypium raimondii
Gorai.003G149400 Gossypium raimondii
Gorai.009G112700 Gossypium raimondii
Gorai.013G270500 Gossypium raimondii
GSVIVG01024678001 Vitis vinifera
HanXRQChr08g0229181 Helianthus annuus
Haze_24388 Corylus avellana
Haze_24395 Corylus avellana
Hma1.2p1_0146F.1_g065460 Hydrangea macrophylla
Hma1.2p1_0841F.1_g226850 Hydrangea macrophylla
Hma1.2p1_0841F.1_g226910 Hydrangea macrophylla
Hma1.2p1_2630F.1_g325730 Hydrangea macrophylla
HPP92_003242 Vanilla planifolia
HPP92_011999 Vanilla planifolia
HPP92_012000 Vanilla planifolia
HPP92_012001 Vanilla planifolia
HPP92_012002 Vanilla planifolia
HPP92_012023 Vanilla planifolia
HPP92_012024 Vanilla planifolia
HPP92_025110 Vanilla planifolia
Hund18957 Selenicereus undatus
Hund18961 Selenicereus undatus
Lalb_Chr04g0252031 Lupinus albus
Lalb_Chr04g0252081 Lupinus albus
Lalb_Chr10g0103541 Lupinus albus
Lalb_Chr15g0083121 Lupinus albus
Lalb_Chr15g0083131 Lupinus albus
Lalb_Chr17g0345341 Lupinus albus
Lj1A128G36 Lonicera japonica
Lj1C128G5 Lonicera japonica
Lj1C128T10 Lonicera japonica
Lj2A1091G43 Lonicera japonica
Lj6g0001278 Lotus japonicus
Lj6g0014994 Lotus japonicus
Lsat_1_v5_gn_1_24841 Lactuca sativa
Lsat_1_v5_gn_3_43881 Lactuca sativa
Lsat_1_v5_gn_6_48181 Lactuca sativa
Lsat_1_v5_gn_6_80801 Lactuca sativa
Lsat_1_v5_gn_6_89500 Lactuca sativa
Lsat_1_v5_gn_9_18521 Lactuca sativa
Lsat_1_v5_gn_9_54560 Lactuca sativa
Manes.02G215950 Manihot esculenta
Manes.02G216300 Manihot esculenta
Manes.18G141005 Manihot esculenta
Mapoly0006s0080 Marchantia polymorpha
Mapoly0074s0009 Marchantia polymorpha
MBI03_g47570_MAGBIO Magnolia biondii
MBI05_g02399_MAGBIO Magnolia biondii
MCO07G130 Micromonas commoda
MCO15G578 Micromonas commoda
MD03G1060300 Malus domestica
MD11G1063400 Malus domestica
MD11G1065500 Malus domestica
Medtr3g031740 Medicago truncatula
Medtr3g465600 Medicago truncatula
MELO3C020506.2 Cucumis melo
MELO3C020522.2 Cucumis melo
Migut.F01663 Erythranthe guttata
Migut.N00767 Erythranthe guttata
MSTRG.8115 Avicennia marina
MSTRG.9115 Avicennia marina
Nitab4.5_0000967g0020 Nicotiana tabacum
Nitab4.5_0001115g0080 Nicotiana tabacum
Nitab4.5_0001469g0010 Nicotiana tabacum
Nitab4.5_0004155g0010 Nicotiana tabacum
Nitab4.5_0004155g0040 Nicotiana tabacum
Nitab4.5_0004174g0030 Nicotiana tabacum
Nitab4.5_0006148g0010 Nicotiana tabacum
Nitab4.5_0006148g0070 Nicotiana tabacum
Nn1g04222 Nelumbo nucifera
Nn2g10970 Nelumbo nucifera
Nn2g13237 Nelumbo nucifera
Oeu023980.1 Olea europaea
Oeu053356.2 Olea europaea
Oeu060884.1 Olea europaea
Oeu064670.1 Olea europaea
Os01g0164400 Oryza sativa ssp. japonica
Os03g0295700 Oryza sativa ssp. japonica
Peaxi162Scf00390g00821 Petunia axillaris
Peaxi162Scf00390g00823 Petunia axillaris
Peaxi162Scf00808g00011 Petunia axillaris
Peaxi162Scf00808g00111 Petunia axillaris
PGR102G2830 Punica granatum
PGSC0003DMG400030372 Solanum tuberosum
PGSC0003DMG400030374 Solanum tuberosum
Phvul.006G072400 Phaseolus vulgaris
Phvul.006G072900 Phaseolus vulgaris
Phvul.008G257600 Phaseolus vulgaris
Potri.001G280832 Populus trichocarpa
Potri.001G280900 Populus trichocarpa
Potri.001G281300 Populus trichocarpa
Potri.009G076000 Populus trichocarpa
Potri.009G076600 Populus trichocarpa
Pp3c12_3430 Physcomitrium patens
Pp3c17_1620 Physcomitrium patens
Pp3c17_9080 Physcomitrium patens
Pp3c20_20280 Physcomitrium patens
Pp3c20_20284 Physcomitrium patens
Pp3c22_21020 Physcomitrium patens
Prupe.6G050700 Prunus persica
Prupe.6G051700 Prunus persica
Psat5g153880 Pisum sativum
Psat5g155480 Pisum sativum
PSO339G3538 Papaver somniferum
PSO801G0069 Papaver somniferum
QL01p039781 Quercus lobata
QL01p039969 Quercus lobata
RcHm_v2.0_Chr5g0070931 Rosa chinensis
RcHm_v2.0_Chr5g0071281 Rosa chinensis
Rhsim13G0065900 Rhododendron simsii
Sabra09G0057900 Salix brachista
Sabra09G0058400 Salix brachista
Sabra16G0175000 Salix brachista
Sc12g0000270 Simmondsia chinensis
Sc21g0005190 Simmondsia chinensis
Sed0002046 Sechium edule
Sed0020719 Sechium edule
Sed0021639 Sechium edule
SEGI_06649 Sequoiadendron giganteum
SEGI_15036 Sequoiadendron giganteum
SEGI_18638 Sequoiadendron giganteum
SEGI_19079 Sequoiadendron giganteum
SEGI_34430 Sequoiadendron giganteum
SEGI_39431 Sequoiadendron giganteum
SGA_v2.0_scaffold104G30143 Striga asiatica
SGA_v2.0_scaffold62G21324 Striga asiatica
SGA_v2.0_scaffold63G21659 Striga asiatica
SHI19193 Sapria himalayana
SHI19198 Sapria himalayana
SMO141G0064 Selaginella moellendorffii
SMO141G0130 Selaginella moellendorffii
SMO358G0702 Selaginella moellendorffii
Solyc06g082200.4 Solanum lycopersicum
Solyc06g082220.4 Solanum lycopersicum
Sopen06g033580 Solanum pennellii
Sopen06g033600 Solanum pennellii
Sp6g20160 Schrenkiella parvula
Sp6g20200 Schrenkiella parvula
TAR209G0006 Trochodendron aralioides
TAR357G0005 Trochodendron aralioides
TAR369G0522 Trochodendron aralioides
TAR623G0025 Trochodendron aralioides
TAR633G1742 Trochodendron aralioides
THA.LOC104799388 Tarenaya hassleriana
Thecc.09G354800 Theobroma cacao
Thecc.09G355700 Theobroma cacao
Thhalv10012586m.g Eutrema salsugineum
TPR.G32915 Trifolium pratense
TWI31G1212 Tripterygium wilfordii
TWI79G0783 Tripterygium wilfordii
unitig_26.g10217 Utricularia gibba
unitig_736.g22533 Utricularia gibba
vmacro02934 Vaccinium macrocarpon
vmacro02935 Vaccinium macrocarpon
vmacro14615 Vaccinium macrocarpon
VMungo0540G1016 Vigna mungo
VMungo0540G2394 Vigna mungo
VMungo0647G0105 Vigna mungo
VMungo0647G0969 Vigna mungo
VMungo0647G1676 Vigna mungo
VMungo0647G1991 Vigna mungo
Zm00001eb123460 Zea mays
Zm00001eb336220 Zea mays
Zm00001eb396860 Zea mays

User provided reference genes

Program Settings