Gene: Sopen06g033600

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g033600
  • Transcript Identifier Sopen06g033600.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 59054567-59058343 : positive

Gene Family Information

  • ID HOM05D002034
  • #Genes/#Species 326/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g033600.1

Descriptions

  • Description TBP-associated factor 15B (TAF15b) | FUNCTIONS IN: binding, nucleotide binding, zinc ion binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait , Zinc finger, RanBP2-type | BEST Arabidopsis thaliana protein match is: TBP-associated factor 15
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005096
ISO
PLAZA Homology (enrichment)GTPase activator activity HOM05D002034

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G58470

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001876 Zinc finger, RanBP2-type
IPR036443 Zinc finger, RanBP2-type superfamily
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
35.1 not assigned.annotated