Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p44360 Brassica napus
A04p09870 Brassica napus
A05p11000 Brassica napus
A05p11190 Brassica napus
A05p11210 Brassica napus
A06p03400 Brassica napus
A07p06690 Brassica napus
Aa31sc124G60 Aethionema arabicum
Aa31sc693G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1165 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4850 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1894 Anthoceros agrestis
Actinidia00117 Actinidia chinensis
Actinidia02810 Actinidia chinensis
Actinidia05056 Actinidia chinensis
Actinidia10095 Actinidia chinensis
Actinidia20187 Actinidia chinensis
Ah.05g179970 Amaranthus hybridus
AL1G58350 Arabidopsis lyrata
AL3G42150 Arabidopsis lyrata
AL7G44520 Arabidopsis lyrata
Aqoxy4G00139 Aquilegia oxysepala
Aqoxy4G00140 Aquilegia oxysepala
Aqoxy4G00201 Aquilegia oxysepala
Aqoxy593s001 Aquilegia oxysepala
Aqoxy5G04032 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3ECK1U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HV0900 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J67C2G Arachis hypogaea
AT2G04520 Arabidopsis thaliana
AT5G35680 Arabidopsis thaliana
ATR0051G017 Amborella trichopoda
ATR0665G391 Amborella trichopoda
ATR0733G090 Amborella trichopoda
Atru.chr5.608 Acer truncatum
Atru.chr6.3287 Acer truncatum
Atru.chr6.3302 Acer truncatum
AUR62004437 Chenopodium quinoa
AUR62023511 Chenopodium quinoa
BcaB02g09539 Brassica carinata
BcaB06g26817 Brassica carinata
BcaB06g26963 Brassica carinata
BcaB06g28768 Brassica carinata
BcaB08g34478 Brassica carinata
BcaC01g03198 Brassica carinata
BcaC02g09487 Brassica carinata
BcaC02g11510 Brassica carinata
BcaC06g35877 Brassica carinata
BcaC08g43182 Brassica carinata
BolC3t17772H Brassica oleracea
BolC4t23037H Brassica oleracea
BolC4t25913H Brassica oleracea
BolC7t41465H Brassica oleracea
BraA03t13566Z Brassica rapa
BraA04t16649Z Brassica rapa
BraA05t20068Z Brassica rapa
BraA07t28461Z Brassica rapa
C03p54950 Brassica napus
C03p54970 Brassica napus
C04p14540 Brassica napus
C04p43350 Brassica napus
C07p10160 Brassica napus
CAN.G1102.1 Capsicum annuum
CAN.G310.8 Capsicum annuum
CAN.G78.152 Capsicum annuum
CANSAT64G0394 Cannabis sativa
CANSAT78G0249 Cannabis sativa
CARHR102410 Cardamine hirsuta
CARHR134780 Cardamine hirsuta
CARHR217040 Cardamine hirsuta
Carub.0003s2615 Capsella rubella
Carub.0007s3140 Capsella rubella
Ca_01777_v3 Cicer arietinum L.
Ca_23560_v3 Cicer arietinum L.
CBR_g40396 Chara braunii
Cc01_g06350 Coffea canephora
Cc01_g06360 Coffea canephora
Cc02_g38840 Coffea canephora
Cc05_g14370 Coffea canephora
CDE02G1739 Ceratophyllum demersum
CDE02G2570 Ceratophyllum demersum
CDE08G1378 Ceratophyllum demersum
CDE10G1120 Ceratophyllum demersum
CDE10G1278 Ceratophyllum demersum
Cfa003844 Carpinus fangiana
Cfa014288 Carpinus fangiana
Cfa023497 Carpinus fangiana
Ciclev10017092m.g Citrus clementina
Ciclev10022729m.g Citrus clementina
CiPaw.01G070600 Carya illinoinensis
CiPaw.03G274900 Carya illinoinensis
CiPaw.04G193000 Carya illinoinensis
ClCG02G002400 Citrullus lanatus
ClCG07G015640 Citrullus lanatus
COL.COLO4_05391 Corchorus olitorius
COL.COLO4_06346 Corchorus olitorius
Cpa.g.sc132.54 Carica papaya
Cre02.g103550 Chlamydomonas reinhardtii
CsaV3_2G015740 Cucumis sativus L.
CsaV3_7G003030 Cucumis sativus L.
CSS0004721 Camellia sinensis var. sinensis
CSS0007973 Camellia sinensis var. sinensis
CSS0034000 Camellia sinensis var. sinensis
CSS0036881 Camellia sinensis var. sinensis
CSS0037985 Camellia sinensis var. sinensis
CSS0040298 Camellia sinensis var. sinensis
DCAR_005371 Daucus carota
DCAR_008645 Daucus carota
Dinv06444 Davidia involucrata
Dinv12083 Davidia involucrata
Dinv22226 Davidia involucrata
Duzib133G0423 Durio zibethinus
Duzib133G1403 Durio zibethinus
Duzib138G0759 Durio zibethinus
Duzib138G1202 Durio zibethinus
Duzib211G0343 Durio zibethinus
Duzib268G1338 Durio zibethinus
ECA234G2645 Erigeron canadensis
ECA236G1255 Erigeron canadensis
ECA236G1936 Erigeron canadensis
EL10Ac1g00325 Beta vulgaris
Eucgr.A01082 Eucalyptus grandis
Eucgr.C04245 Eucalyptus grandis
Eucgr.L01307 Eucalyptus grandis
FAN01G2829 Fragaria x ananassa
FAN02G2880 Fragaria x ananassa
FAN02G2949 Fragaria x ananassa
FAN03G1167 Fragaria x ananassa
FAN03G2235 Fragaria x ananassa
FAN05G0597 Fragaria x ananassa
FAN06G1717 Fragaria x ananassa
FAN06G3379 Fragaria x ananassa
FAN06G3519 Fragaria x ananassa
FAN08G0247 Fragaria x ananassa
FAN09G0209 Fragaria x ananassa
FAN10G1620 Fragaria x ananassa
FAN10G3287 Fragaria x ananassa
FAN14G1753 Fragaria x ananassa
FAN14G5906 Fragaria x ananassa
FAN15G3603 Fragaria x ananassa
FvH4_6g30180 Fragaria vesca
FvH4_6g41720 Fragaria vesca
FvH4_7g16270 Fragaria vesca
FvH4_7g32130 Fragaria vesca
Glyma.03G254700 Glycine max
Glyma.07G060900 Glycine max
Glyma.16G029500 Glycine max
Glyma.19G252400 Glycine max
Gohir.A07G188600 Gossypium hirsutum
Gohir.A08G050100 Gossypium hirsutum
Gohir.A08G126400 Gossypium hirsutum
Gohir.A11G151500 Gossypium hirsutum
Gohir.A12G110400 Gossypium hirsutum
Gohir.D07G195200 Gossypium hirsutum
Gohir.D08G060000 Gossypium hirsutum
Gohir.D08G147900 Gossypium hirsutum
Gohir.D11G158500 Gossypium hirsutum
Gohir.D12G113400 Gossypium hirsutum
Gorai.001G218400 Gossypium raimondii
Gorai.004G061900 Gossypium raimondii
Gorai.004G153400 Gossypium raimondii
Gorai.007G168900 Gossypium raimondii
Gorai.008G123000 Gossypium raimondii
HanXRQChr04g0118341 Helianthus annuus
HanXRQChr15g0480151 Helianthus annuus
Haze_12735 Corylus avellana
Haze_15606 Corylus avellana
Haze_23552 Corylus avellana
Haze_27673 Corylus avellana
Hma1.2p1_0036F.1_g023050 Hydrangea macrophylla
Hma1.2p1_0384F.1_g140906 Hydrangea macrophylla
Hma1.2p1_0384F.1_g140910 Hydrangea macrophylla
Hma1.2p1_0397F.1_g143765 Hydrangea macrophylla
Hma1.2p1_1199F.1_g266310 Hydrangea macrophylla
Hma1.2p1_1332F.1_g276165 Hydrangea macrophylla
HPP92_000510 Vanilla planifolia
HPP92_021668 Vanilla planifolia
HPP92_027384 Vanilla planifolia
Hund16689 Selenicereus undatus
Hund27228 Selenicereus undatus
Lalb_Chr04g0254611 Lupinus albus
Lalb_Chr10g0100121 Lupinus albus
Lalb_Chr17g0342211 Lupinus albus
Lj1g0004347 Lotus japonicus
Lj3g0026564 Lotus japonicus
Lsat_1_v5_gn_7_1500 Lactuca sativa
Lsat_1_v5_gn_7_1560 Lactuca sativa
Lsat_1_v5_gn_7_30240 Lactuca sativa
Lsat_1_v5_gn_7_90940 Lactuca sativa
Manes.05G027000 Manihot esculenta
Manes.12G060703 Manihot esculenta
Manes.13G064600 Manihot esculenta
Mapoly0016s0096 Marchantia polymorpha
Mapoly0044s0054 Marchantia polymorpha
Mapoly0087s0034 Marchantia polymorpha
MBI06_g04293_MAGBIO Magnolia biondii
MBI07_g11385_MAGBIO Magnolia biondii
MCO16G669 Micromonas commoda
MD01G1220000 Malus domestica
MD07G1290100 Malus domestica
MD09G1117700 Malus domestica
MD17G1108800 Malus domestica
MD17G1109000 Malus domestica
Medtr3g005520 Medicago truncatula
Medtr8g028180 Medicago truncatula
MELO3C018872.2 Cucumis melo
MELO3C020786.2 Cucumis melo
Migut.B01821 Erythranthe guttata
Migut.B01822 Erythranthe guttata
Migut.N01570 Erythranthe guttata
MSTRG.17311 Avicennia marina
MSTRG.20881 Avicennia marina
MSTRG.28241 Avicennia marina
MSTRG.4824 Avicennia marina
Nitab4.5_0000200g0010 Nicotiana tabacum
Nitab4.5_0000305g0230 Nicotiana tabacum
Nitab4.5_0001867g0130 Nicotiana tabacum
Nitab4.5_0002262g0150 Nicotiana tabacum
Nitab4.5_0003779g0110 Nicotiana tabacum
Nitab4.5_0004613g0070 Nicotiana tabacum
Nitab4.5_0005619g0020 Nicotiana tabacum
Nn1g03325 Nelumbo nucifera
Nn1g07361 Nelumbo nucifera
Nn2g13945 Nelumbo nucifera
Nn3g19118 Nelumbo nucifera
Oeu004923.1 Olea europaea
Oeu007832.1 Olea europaea
Oeu022852.1 Olea europaea
Oeu036576.1 Olea europaea
Oeu063663.1 Olea europaea
Oeu063664.1 Olea europaea
Oeu063665.1 Olea europaea
Os02g0300700 Oryza sativa ssp. japonica
Os06g0342200 Oryza sativa ssp. japonica
Peaxi162Scf00585g01018 Petunia axillaris
Peaxi162Scf01012g00233 Petunia axillaris
PGR042G1844 Punica granatum
PGSC0003DMG400000086 Solanum tuberosum
PGSC0003DMG400019402 Solanum tuberosum
PGSC0003DMG400033875 Solanum tuberosum
Phvul.006G109500 Phaseolus vulgaris
Phvul.010G108300 Phaseolus vulgaris
Potri.002G031700 Populus trichocarpa
Potri.002G219200 Populus trichocarpa
Potri.014G093801 Populus trichocarpa
Potri.014G160900 Populus trichocarpa
Pp3c13_13363 Physcomitrium patens
Pp3c13_13620 Physcomitrium patens
Pp3c3_18370 Physcomitrium patens
Pp3c3_18420 Physcomitrium patens
PRCOL_00000490 Prasinoderma coloniale
Prupe.3G206200 Prunus persica
Psat1g000760 Pisum sativum
Psat4g213840 Pisum sativum
PSO063G0140 Papaver somniferum
PSO063G4703 Papaver somniferum
PSO135G0113 Papaver somniferum
PSO135G0344 Papaver somniferum
PSO135G0776 Papaver somniferum
PSO170G0938 Papaver somniferum
PSO170G2870 Papaver somniferum
QL04p059781 Quercus lobata
QL07p005217 Quercus lobata
QL08p029774 Quercus lobata
RcHm_v2.0_Chr1g0359281 Rosa chinensis
RcHm_v2.0_Chr2g0136391 Rosa chinensis
RcHm_v2.0_Chr2g0157471 Rosa chinensis
RcHm_v2.0_Chr4g0392931 Rosa chinensis
Rhsim06G0224000 Rhododendron simsii
Rhsim07G0008100 Rhododendron simsii
RhsimUnG0008900 Rhododendron simsii
Sabra02G0170800 Salix brachista
Sabra14G0122600 Salix brachista
SalBow3G4261 Salvia bowleyana
SalBow5G5202 Salvia bowleyana
Sc01g0003050 Simmondsia chinensis
Sc23g0002390 Simmondsia chinensis
Sed0003797 Sechium edule
Sed0010946 Sechium edule
Sed0017793 Sechium edule
Sed0020983 Sechium edule
SEGI_05890 Sequoiadendron giganteum
SEGI_19874 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05710 Striga asiatica
SGA_v2.0_scaffold43G16382 Striga asiatica
SGA_v2.0_scaffold4G02263 Striga asiatica
SHI25300 Sapria himalayana
SMO364G0907 Selaginella moellendorffii
Solyc01g095410.3 Solanum lycopersicum
Solyc05g050200.4 Solanum lycopersicum
Solyc10g011780.1 Solanum lycopersicum
Sopen05g028630 Solanum pennellii
Sopen10g005570 Solanum pennellii
Sp3g23300 Schrenkiella parvula
Sp7g06600 Schrenkiella parvula
SpUn1174_0010 Schrenkiella parvula
TAR374G0744 Trochodendron aralioides
TAR629G1301 Trochodendron aralioides
TAR636G2226 Trochodendron aralioides
TAR636G2341 Trochodendron aralioides
THA.LOC104808868 Tarenaya hassleriana
THA.LOC104815350 Tarenaya hassleriana
THA.LOC104825865 Tarenaya hassleriana
THA.LOC104826610 Tarenaya hassleriana
Thecc.01G187200 Theobroma cacao
Thecc.01G348900 Theobroma cacao
Thhalv10002706m.g Eutrema salsugineum
Thhalv10005086m.g Eutrema salsugineum
Thhalv10009359m.g Eutrema salsugineum
TPR.G20675 Trifolium pratense
TPR.G21294 Trifolium pratense
TPR.G25506 Trifolium pratense
TPR.G27098 Trifolium pratense
TPR.G28223 Trifolium pratense
TWI14G1033 Tripterygium wilfordii
TWI36G0668 Tripterygium wilfordii
TWI75G0713 Tripterygium wilfordii
unitig_578.g16487 Utricularia gibba
unitig_8.g4992 Utricularia gibba
vmacro13206 Vaccinium macrocarpon
vmacro20866 Vaccinium macrocarpon
vmacro20869 Vaccinium macrocarpon
vmacro22304 Vaccinium macrocarpon
vmacro22997 Vaccinium macrocarpon
VMungo0331G1655 Vigna mungo
VMungo0540G1106 Vigna mungo
Zm00001eb236830 Zea mays
Zm00001eb422630 Zea mays

User provided reference genes

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