Gene: AT2G04520

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G04520
  • Transcript Identifier AT2G04520.1
  • Gene Type Coding gene
  • Location Chr2 : 1574802-1575239 : negative

Gene Family Information

  • ID HOM05D002018
  • #Genes/#Species 328/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G04520.1
  • uniprot Q9SJB9

Descriptions

  • Description Nucleic acid-binding, OB-fold-like protein
  • Computational description Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), S1, IF1 type (InterPro:IPR006196), Translation initiation factor 1A (eIF-1A), conserved site (InterPro:IPR018104), Translation initiation factor 1A (eIF-1A) (InterPro:IPR001253); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT5G35680.2); Has 921 Blast hits to 921 proteins in 273 species: Archae - 305; Bacteria - 0; Metazoa - 209; Fungi - 83; Plants - 55; Viruses - 0; Other Eukaryotes - 269 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006413
IEA
GOA Databasetranslational initiation
GO:0006413
IBA
Gene Ontologytranslational initiation1
GO:0006413
IEA
InterProtranslational initiation
GO:0006412
IEA
GOA Databasetranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IDA
Gene OntologymRNA binding2
GO:0003743
IEA
GOA Databasetranslation initiation factor activity
GO:0003743
IBA
Gene Ontologytranslation initiation factor activity1
GO:0003743
IEA
InterProtranslation initiation factor activity
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005739
HDA
Gene Ontologymitochondrion3
GO:0005737
IBA
Gene Ontologycytoplasm1
GO:0005829
IDA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006196 RNA-binding domain, S1, IF1 type
IPR001253 Translation initiation factor 1A (eIF-1A)
IPR012340 Nucleic acid-binding, OB-fold
Mapman id Description
17.4.1.1.2 Protein biosynthesis.translation initiation.Pre-Initiation Complex (PIC) module.eIF1 PIC assembly factor activity.assembly factor (eIF1A)