Gene: AT5G35680

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G35680
  • Transcript Identifier AT5G35680.1
  • Gene Type Coding gene
  • Location Chr5 : 13858152-13858589 : negative

Gene Family Information

  • ID HOM05D002018
  • #Genes/#Species 328/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G35680.1
  • uniprot Q9FKI2

Descriptions

  • Description Nucleic acid-binding, OB-fold-like protein
  • Computational description Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), S1, IF1 type (InterPro:IPR006196), Translation initiation factor 1A (eIF-1A), conserved site (InterPro:IPR018104), Translation initiation factor 1A (eIF-1A) (InterPro:IPR001253); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT2G04520.1); Has 942 Blast hits to 942 proteins in 272 species: Archae - 307; Bacteria - 0; Metazoa - 231; Fungi - 83; Plants - 55; Viruses - 0; Other Eukaryotes - 266 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006413
IEA
GOA Databasetranslational initiation
GO:0006413
IBA
Gene Ontologytranslational initiation1
GO:0006413
IEA
InterProtranslational initiation
GO:0006412
IEA
GOA Databasetranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IDA
Gene OntologymRNA binding2
GO:0003743
IEA
GOA Databasetranslation initiation factor activity
GO:0003743
IBA
Gene Ontologytranslation initiation factor activity1
GO:0003743
IEA
InterProtranslation initiation factor activity
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005829
RCA
Gene Ontologycytosol3
GO:0009536
HDA
Gene Ontologyplastid4
GO:0005737
IBA
Gene Ontologycytoplasm1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006196 RNA-binding domain, S1, IF1 type
IPR001253 Translation initiation factor 1A (eIF-1A)
IPR012340 Nucleic acid-binding, OB-fold
Mapman id Description
17.4.1.1.2 Protein biosynthesis.translation initiation.Pre-Initiation Complex (PIC) module.eIF1 PIC assembly factor activity.assembly factor (eIF1A)