Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p30740 Brassica napus
A02p17970 Brassica napus
A04p18680 Brassica napus
A07p30240 Brassica napus
A07p38570 Brassica napus
A09p56340 Brassica napus
Aa31LG4G2720 Aethionema arabicum
Aa31LG7G2180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5617 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2611 Anthoceros agrestis
Actinidia21820 Actinidia chinensis
Actinidia26005 Actinidia chinensis
Actinidia31154 Actinidia chinensis
Ah.10g033960 Amaranthus hybridus
Ah.16g102320 Amaranthus hybridus
AL2G32050 Arabidopsis lyrata
AL3G14910 Arabidopsis lyrata
AL4G14760 Arabidopsis lyrata
Aqoxy7G00977 Aquilegia oxysepala
Aqoxy7G04158 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0B1JTP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0V0RDL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.17ZJZB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.47LZPG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.57Y9Y2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.580W3K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5AIE8N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5AL5B9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5DQ8NN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5WK7YL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6L0DKZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6MM3U8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8FM2MC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A5FI2Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AK3C9U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C21L6K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CC6MMP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D1M421 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EEB7RT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EJEW20 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ERZH2H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FC9ZM5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FK7WRT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FWV18L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GL0HPP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H7IDAD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JR1J9J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KTP8FH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MMYA9P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MUNX8C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NR2UP9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PN19U5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PRC890 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q5L7SC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QRM4D1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RCN87I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S11DPF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S1KKCT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SJ415B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T0XH3Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T4QJTS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TA7E4Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TBF22G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V0GV5C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WLNR1X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WT8VKW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XHBV4U Arachis hypogaea
AT1G72370 Arabidopsis thaliana
AT3G04770 Arabidopsis thaliana
ATR0564G285 Amborella trichopoda
ATR0810G077 Amborella trichopoda
Atru.chr1.4128 Acer truncatum
Atru.chr8.626 Acer truncatum
AUR62001431 Chenopodium quinoa
AUR62009090 Chenopodium quinoa
AUR62009936 Chenopodium quinoa
AUR62020580 Chenopodium quinoa
BcaB03g14985 Brassica carinata
BcaB03g14987 Brassica carinata
BcaB03g15664 Brassica carinata
BcaB05g24750 Brassica carinata
BcaC02g08469 Brassica carinata
BcaC03g15373 Brassica carinata
BcaC03g15485 Brassica carinata
BcaC03g15923 Brassica carinata
BcaC07g40937 Brassica carinata
BcaC08g45711 Brassica carinata
BcaC08g46693 Brassica carinata
BolC2t09037H Brassica oleracea
BolC2t09196H Brassica oleracea
BolC2t09697H Brassica oleracea
BolC4t26946H Brassica oleracea
BolC6t38598H Brassica oleracea
BolC6t39718H Brassica oleracea
BolC8t51503H Brassica oleracea
BraA02t06844Z Brassica rapa
BraA04t17478Z Brassica rapa
BraA07t30661Z Brassica rapa
BraA07t31415Z Brassica rapa
BraA09t41029Z Brassica rapa
C02p29870 Brassica napus
C02p31640 Brassica napus
C04p53970 Brassica napus
C06p34990 Brassica napus
C06p46740 Brassica napus
C08p39310 Brassica napus
CAN.G1495.16 Capsicum annuum
CAN.G65.59 Capsicum annuum
CAN.G861.9 Capsicum annuum
CANSAT56G1183 Cannabis sativa
CANSAT80G0512 Cannabis sativa
CANSAT80G1760 Cannabis sativa
CARHR065280 Cardamine hirsuta
CARHR079020 Cardamine hirsuta
Carub.0002s1923 Capsella rubella
Carub.0003s0394 Capsella rubella
Ca_16926_v3 Cicer arietinum L.
Ca_16938_v3 Cicer arietinum L.
Ca_24745_v3 Cicer arietinum L.
CBR_g52047 Chara braunii
Cc04_g04980 Coffea canephora
CDE04G3599 Ceratophyllum demersum
CDE06G2274 Ceratophyllum demersum
CDE11G0855 Ceratophyllum demersum
Cfa003489 Carpinus fangiana
Cfa017078 Carpinus fangiana
Cfa024447 Carpinus fangiana
Ciclev10026113m.g Citrus clementina
CiPaw.01G213700 Carya illinoinensis
CiPaw.01G213800 Carya illinoinensis
CiPaw.02G132700 Carya illinoinensis
ClCG07G009060 Citrullus lanatus
ClCG07G014360 Citrullus lanatus
ClCG08G002570 Citrullus lanatus
COL.COLO4_30834 Corchorus olitorius
Cpa.g.sc25.174 Carica papaya
Cpa.g.sc80.72 Carica papaya
Cre10.g432800 Chlamydomonas reinhardtii
CsaV3_3G030910 Cucumis sativus L.
CsaV3_4G005150 Cucumis sativus L.
CsaV3_6G002760 Cucumis sativus L.
CSS0010613 Camellia sinensis var. sinensis
CSS0011036 Camellia sinensis var. sinensis
DCAR_007654 Daucus carota
DCAR_022091 Daucus carota
DCAR_022656 Daucus carota
DCAR_026112 Daucus carota
DCAR_029481 Daucus carota
DCAR_032325 Daucus carota
Dinv20395 Davidia involucrata
Dinv37833 Davidia involucrata
Duzib160G0659 Durio zibethinus
Duzib192G0533 Durio zibethinus
Duzib235G0821 Durio zibethinus
ECA234G3452 Erigeron canadensis
ECA247G0814 Erigeron canadensis
EL10Ac2g03794 Beta vulgaris
EL10Ac7g16462 Beta vulgaris
Eucgr.I02137 Eucalyptus grandis
Eucgr.J02605 Eucalyptus grandis
FAN02G0020 Fragaria x ananassa
FAN04G1831 Fragaria x ananassa
FAN05G5332 Fragaria x ananassa
FAN08G1314 Fragaria x ananassa
FAN09G3288 Fragaria x ananassa
FAN13G2972 Fragaria x ananassa
FAN14G3429 Fragaria x ananassa
FAN18G2609 Fragaria x ananassa
FvH4_5g30400 Fragaria vesca
FvH4_6g35470 Fragaria vesca
Glyma.07G043800 Glycine max
Glyma.08G159800 Glycine max
Glyma.15G267100 Glycine max
Glyma.16G012200 Glycine max
Gohir.A06G143200 Gossypium hirsutum
Gohir.A10G051400 Gossypium hirsutum
Gohir.D06G149300 Gossypium hirsutum
Gohir.D10G053100 Gossypium hirsutum
Gorai.010G173800 Gossypium raimondii
Gorai.011G056700 Gossypium raimondii
GSVIVG01016695001 Vitis vinifera
HanXRQChr02g0037351 Helianthus annuus
HanXRQChr04g0094341 Helianthus annuus
HanXRQChr10g0311931 Helianthus annuus
HanXRQChr12g0360141 Helianthus annuus
Haze_16105 Corylus avellana
Haze_21122 Corylus avellana
Haze_26246 Corylus avellana
Hma1.2p1_0090F.1_g045980 Hydrangea macrophylla
Hma1.2p1_0229F.1_g096970 Hydrangea macrophylla
HPP92_011070 Vanilla planifolia
HPP92_016610 Vanilla planifolia
HPP92_026314 Vanilla planifolia
Hund05713 Selenicereus undatus
Hund18653 Selenicereus undatus
Hund19425 Selenicereus undatus
Lalb_Chr04g0253831 Lupinus albus
Lalb_Chr04g0261151 Lupinus albus
Lalb_Chr10g0101221 Lupinus albus
Lalb_Chr17g0343361 Lupinus albus
Lj3g0019004 Lotus japonicus
Lj3g0023507 Lotus japonicus
Lj5A31T65 Lonicera japonica
Lj9A536T73 Lonicera japonica
Lsat_1_v5_gn_1_107740 Lactuca sativa
Lsat_1_v5_gn_1_12380 Lactuca sativa
Lsat_1_v5_gn_1_38480 Lactuca sativa
Manes.04G149300 Manihot esculenta
Manes.04G149400 Manihot esculenta
Manes.11G014400 Manihot esculenta
Manes.11G014600 Manihot esculenta
Manes.11G014701 Manihot esculenta
Manes.15G181500 Manihot esculenta
Mapoly0025s0055 Marchantia polymorpha
MBI13_g01672_MAGBIO Magnolia biondii
MBI19_g36229_MAGBIO Magnolia biondii
MCO11G936 Micromonas commoda
MD05G1165200 Malus domestica
MD09G1175600 Malus domestica
MD10G1154500 Malus domestica
MD11G1266300 Malus domestica
MD11G1266400 Malus domestica
MD11G1266600 Malus domestica
MD17G1151200 Malus domestica
Medtr3g095810 Medicago truncatula
Medtr7g107400 Medicago truncatula
MELO3C017553.2 Cucumis melo
MELO3C022691.2 Cucumis melo
MELO3C024994.2 Cucumis melo
MSTRG.2711 Avicennia marina
Nitab4.5_0000477g0050 Nicotiana tabacum
Nitab4.5_0000477g0080 Nicotiana tabacum
Nitab4.5_0000854g0130 Nicotiana tabacum
Nitab4.5_0003367g0030 Nicotiana tabacum
Nitab4.5_0004170g0050 Nicotiana tabacum
Nitab4.5_0005315g0020 Nicotiana tabacum
Nn1g07857 Nelumbo nucifera
Nn6g35631 Nelumbo nucifera
Nn8g38533 Nelumbo nucifera
Oeu006537.1 Olea europaea
Oeu041676.1 Olea europaea
Oeu049150.1 Olea europaea
Os03g0182600 Oryza sativa ssp. japonica
Os03g0402400 Oryza sativa ssp. japonica
Os07g0616600 Oryza sativa ssp. japonica
Peaxi162Scf00643g00435 Petunia axillaris
Peaxi162Scf01026g00008 Petunia axillaris
Peaxi162Scf01390g00026 Petunia axillaris
PGR119G1287 Punica granatum
PGR119G1970 Punica granatum
PGSC0003DMG400015271 Solanum tuberosum
PGSC0003DMG400026970 Solanum tuberosum
PGSC0003DMG401031434 Solanum tuberosum
Phvul.005G043400 Phaseolus vulgaris
Phvul.010G125100 Phaseolus vulgaris
Potri.001G164000 Populus trichocarpa
Potri.003G071200 Populus trichocarpa
Potri.012G117600 Populus trichocarpa
Potri.015G112900 Populus trichocarpa
Pp3c14_15670 Physcomitrium patens
Pp3c14_15680 Physcomitrium patens
Pp3c14_15700 Physcomitrium patens
Pp3c14_17310 Physcomitrium patens
Pp3c17_17600 Physcomitrium patens
Pp3c1_24120 Physcomitrium patens
PRCOL_00006501 Prasinoderma coloniale
Prupe.3G034600 Prunus persica
Prupe.8G193400 Prunus persica
Psat0s2679g0080 Pisum sativum
Psat1g190280 Pisum sativum
Psat1g208280 Pisum sativum
Psat2g099720 Pisum sativum
Psat5g002840 Pisum sativum
Psat5g061800 Pisum sativum
Psat6g007680 Pisum sativum
PSO063G0192 Papaver somniferum
PSO104G0230 Papaver somniferum
PSO170G1668 Papaver somniferum
PSO339G1615 Papaver somniferum
PSO421G0188 Papaver somniferum
PSO541G3998 Papaver somniferum
PSO675G3671 Papaver somniferum
QL05p001945 Quercus lobata
QL05p067559 Quercus lobata
QL07p038053 Quercus lobata
RcHm_v2.0_Chr2g0147021 Rosa chinensis
RcHm_v2.0_Chr7g0224841 Rosa chinensis
Rhsim02G0252500 Rhododendron simsii
Rhsim02G0252600 Rhododendron simsii
Sabra01G0128800 Salix brachista
Sabra02G0137200 Salix brachista
Sabra03G0042000 Salix brachista
Sabra12G0087200 Salix brachista
Sabra15G0134500 Salix brachista
SalBow1G0762 Salvia bowleyana
SalBow2G0996 Salvia bowleyana
SalBow2G3608 Salvia bowleyana
Sc06g0001090 Simmondsia chinensis
Sc10g0007970 Simmondsia chinensis
Sc12g0010820 Simmondsia chinensis
Sed0011920 Sechium edule
Sed0012947 Sechium edule
Sed0016700 Sechium edule
Sed0023674 Sechium edule
Sed0027553 Sechium edule
SEGI_20094 Sequoiadendron giganteum
SEGI_36723 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09039 Striga asiatica
SGA_v2.0_scaffold221G42747 Striga asiatica
SGA_v2.0_scaffold2G01095 Striga asiatica
SGA_v2.0_scaffold370G50107 Striga asiatica
SHI32363 Sapria himalayana
SHI32373 Sapria himalayana
SHI32443 Sapria himalayana
SHI33557 Sapria himalayana
SMO347G0044 Selaginella moellendorffii
Solyc03g019780.4 Solanum lycopersicum
Solyc06g072120.3 Solanum lycopersicum
Sopen03g029850 Solanum pennellii
Sopen06g028410 Solanum pennellii
Sp4g03390 Schrenkiella parvula
Sp5g27460 Schrenkiella parvula
TAR381G0237 Trochodendron aralioides
TAR383G0821 Trochodendron aralioides
TAR624G0574 Trochodendron aralioides
TAR626G1635 Trochodendron aralioides
TAR636G0248 Trochodendron aralioides
THA.LOC104808062 Tarenaya hassleriana
THA.LOC104812271 Tarenaya hassleriana
THA.LOC104813964 Tarenaya hassleriana
Thecc.06G127500 Theobroma cacao
Thhalv10018783m.g Eutrema salsugineum
Thhalv10022011m.g Eutrema salsugineum
TPR.G24072 Trifolium pratense
TPR.G24079 Trifolium pratense
TPR.G32269 Trifolium pratense
TPR.G34641 Trifolium pratense
TPR.G34658 Trifolium pratense
TPR.G7280 Trifolium pratense
TWI14G1111 Tripterygium wilfordii
TWI23G1318 Tripterygium wilfordii
TWI59G0046 Tripterygium wilfordii
unitig_699.g19952 Utricularia gibba
vmacro16560 Vaccinium macrocarpon
vmacro21002 Vaccinium macrocarpon
VMungo0331G0677 Vigna mungo
VMungo1080G0242 Vigna mungo
Zm00001eb002640 Zea mays
Zm00001eb006110 Zea mays
Zm00001eb109330 Zea mays
Zm00001eb327500 Zea mays
Zm00001eb401700 Zea mays
Zm00001eb402570 Zea mays

User provided reference genes

Program Settings