Gene: AT3G04770

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G04770
  • Transcript Identifier AT3G04770.2
  • Gene Type Coding gene
  • Location Chr3 : 1309544-1310846 : negative

Gene Family Information

  • ID HOM05D001862
  • #Genes/#Species 353/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G04770.2
  • symbol RPSAb
  • uniprot F4J4W3

Descriptions

  • Description 40s ribosomal protein SA B
  • Computational description 40s ribosomal protein SA B (RPSAb); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S2 (InterPro:IPR001865), Ribosomal protein S2, conserved site (InterPro:IPR018130), Ribosomal protein S2, eukaryotic/archaeal (InterPro:IPR005707); BEST Arabidopsis thaliana protein match is: 40s ribosomal protein SA (TAIR:AT1G72370.1); Has 3452 Blast hits to 3450 proteins in 1205 species: Archae - 263; Bacteria - 1638; Metazoa - 562; Fungi - 334; Plants - 225; Viruses - 0; Other Eukaryotes - 430 (source: NCBI BLink).
  • Computational description 40s ribosomal protein SA B (RPSAb); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, chloroplast, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S2 (InterPro:IPR001865), Ribosomal protein S2, conserved site (InterPro:IPR018130), Ribosomal protein S2, eukaryotic/archaeal (InterPro:IPR005707); BEST Arabidopsis thaliana protein match is: 40s ribosomal protein SA (TAIR:AT1G72370.2); Has 3720 Blast hits to 3717 proteins in 1345 species: Archae - 262; Bacteria - 1764; Metazoa - 685; Fungi - 333; Plants - 227; Viruses - 0; Other Eukaryotes - 449 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
IBA
Gene Ontologytranslation1
GO:0006412
IEA
InterProtranslation
GO:0000028
IEA
GOA Databaseribosomal small subunit assembly
GO:0000028
IBA
Gene Ontologyribosomal small subunit assembly1
GO:0002181
IBA
Gene Ontologycytoplasmic translation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IDA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0022627
IDA
IEA
GOA Databasecytosolic small ribosomal subunit
GO:0022627
HDA
IBA
Gene Ontologycytosolic small ribosomal subunit1 2
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0015935
IEA
GOA Databasesmall ribosomal subunit
GO:0015935
IEA
InterProsmall ribosomal subunit
GO:0022626
IDA
GOA Databasecytosolic ribosome
GO:0022626
HDA
Gene Ontologycytosolic ribosome3
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0042788
IDA
GOA Databasepolysomal ribosome
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005707 Ribosomal protein S2, eukaryotic/archaeal
IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily
IPR001865 Ribosomal protein S2
Mapman id Description
17.1.3.1.1 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPSa