Gene: AT1G72370

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G72370
  • Transcript Identifier AT1G72370.1
  • Gene Type Coding gene
  • Location Chr1 : 27243148-27244842 : negative

Gene Family Information

  • ID HOM05D001862
  • #Genes/#Species 353/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G72370.1
  • symbol P40
  • Alias AP40,RP40,RPSAA
  • uniprot Q08682

Descriptions

  • Description 40s ribosomal protein SA
  • Computational description 40s ribosomal protein SA (P40); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to salt stress, mature ribosome assembly, translation, response to osmotic stress; LOCATED IN: in 8 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S2 (InterPro:IPR001865), Ribosomal protein S2, conserved site (InterPro:IPR018130), Ribosomal protein S2, eukaryotic/archaeal (InterPro:IPR005707); BEST Arabidopsis thaliana protein match is: 40s ribosomal protein SA B (TAIR:AT3G04770.2); Has 3789 Blast hits to 3785 proteins in 1365 species: Archae - 262; Bacteria - 1853; Metazoa - 688; Fungi - 331; Plants - 191; Viruses - 0; Other Eukaryotes - 464 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
IBA
Gene Ontologytranslation1
GO:0006412
IEA
InterProtranslation
GO:0000028
IEA
GOA Databaseribosomal small subunit assembly
GO:0000028
IBA
Gene Ontologyribosomal small subunit assembly1
GO:0006970
IEP
Gene Ontologyresponse to osmotic stress2
GO:0009651
IEP
Gene Ontologyresponse to salt stress2
GO:0042256
IDA
Gene Ontologymature ribosome assembly
GO:0002181
IBA
Gene Ontologycytoplasmic translation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IDA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
IDA, HDA
Gene OntologymRNA binding3 4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0022626
IDA
GOA Databasecytosolic ribosome
GO:0022626
HDA
Gene Ontologycytosolic ribosome5
GO:0022627
IDA
IEA
GOA Databasecytosolic small ribosomal subunit
GO:0022627
HDA
IBA
Gene Ontologycytosolic small ribosomal subunit1 6
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA, HDA
Gene Ontologycytoplasm7 8
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0009507
IDA
GOA Databasechloroplast
GO:0009507
HDA
Gene Ontologychloroplast9
GO:0042788
IDA
GOA Databasepolysomal ribosome
GO:0005829
IDA
GOA Databasecytosol
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma10
GO:0005634
IDA
GOA Databasenucleus
GO:0005634
HDA
Gene Ontologynucleus11
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0015935
IEA
GOA Databasesmall ribosomal subunit
GO:0015935
IDA
Gene Ontologysmall ribosomal subunit7
GO:0015935
IEA
InterProsmall ribosomal subunit
GO:0005794
RCA
Gene OntologyGolgi apparatus12

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001865 Ribosomal protein S2
IPR005707 Ribosomal protein S2, eukaryotic/archaeal
IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily
Mapman id Description
17.1.3.1.1 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPSa