Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p19680 Brassica napus
A06p15470 Brassica napus
A06p15490 Brassica napus
A07p40680 Brassica napus
A08p29850 Brassica napus
A09p59400 Brassica napus
Aa31LG2G980 Aethionema arabicum
Aa31LG4G5270 Aethionema arabicum
Aa31LG7G4030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.426 Anthoceros agrestis
Actinidia14577 Actinidia chinensis
Actinidia27375 Actinidia chinensis
Actinidia29840 Actinidia chinensis
Actinidia33744 Actinidia chinensis
Actinidia38024 Actinidia chinensis
Ah.01g024480 Amaranthus hybridus
AL1G31920 Arabidopsis lyrata
AL2G34950 Arabidopsis lyrata
Aqoxy6G01017 Aquilegia oxysepala
Aqoxy7G00262 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.97S2FR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EXE5KN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SD134H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W26F3T Arachis hypogaea
AT1G19330 Arabidopsis thaliana
AT1G75060 Arabidopsis thaliana
ATR0680G031 Amborella trichopoda
ATR0733G040 Amborella trichopoda
ATR0789G087 Amborella trichopoda
Atru.chr13.547 Acer truncatum
Atru.chr9.2157 Acer truncatum
AUR62010712 Chenopodium quinoa
AUR62027255 Chenopodium quinoa
BcaB03g14452 Brassica carinata
BcaB05g24883 Brassica carinata
BcaB07g31961 Brassica carinata
BcaB07g31963 Brassica carinata
BcaC03g15539 Brassica carinata
BcaC05g25852 Brassica carinata
BcaC07g41262 Brassica carinata
BcaC08g46938 Brassica carinata
BcaC08g46971 Brassica carinata
BolC2t09259H Brassica oleracea
BolC5t30478H Brassica oleracea
BolC6t39942H Brassica oleracea
BolC8t49565H Brassica oleracea
BolC8t51826H Brassica oleracea
BraA02t07004Z Brassica rapa
BraA06t24659Z Brassica rapa
BraA06t24661Z Brassica rapa
BraA07t31612Z Brassica rapa
BraA08t34920Z Brassica rapa
BraA09t41319Z Brassica rapa
C02p32230 Brassica napus
C05p17710 Brassica napus
C05p17730 Brassica napus
C06p49070 Brassica napus
C08p19400 Brassica napus
C08p42650 Brassica napus
CAN.G1126.14 Capsicum annuum
CAN.G1392.6 Capsicum annuum
CAN.G532.5 Capsicum annuum
CANSAT21G0650 Cannabis sativa
CANSAT25G0655 Cannabis sativa
CARHR019920 Cardamine hirsuta
CARHR068390 Cardamine hirsuta
Carub.0001s1892 Capsella rubella
Carub.0002s2185 Capsella rubella
Ca_13339_v3 Cicer arietinum L.
Ca_15526_v3 Cicer arietinum L.
CBR_g46221 Chara braunii
Cc08_g14970 Coffea canephora
Cc10_g03340 Coffea canephora
CDE01G0660 Ceratophyllum demersum
CDE02G0258 Ceratophyllum demersum
CDE02G0536 Ceratophyllum demersum
CDE02G1262 Ceratophyllum demersum
CDE04G2196 Ceratophyllum demersum
Cfa010784 Carpinus fangiana
Cfa010786 Carpinus fangiana
Cfa010788 Carpinus fangiana
Cfa012205 Carpinus fangiana
Cfa018440 Carpinus fangiana
Ciclev10002391m.g Citrus clementina
Ciclev10022027m.g Citrus clementina
CiPaw.01G130800 Carya illinoinensis
CiPaw.04G150400 Carya illinoinensis
CiPaw.11G132800 Carya illinoinensis
CiPaw.12G091400 Carya illinoinensis
CiPaw.15G073200 Carya illinoinensis
CiPaw.15G161300 Carya illinoinensis
CiPaw.16G054200 Carya illinoinensis
CiPaw.16G056900 Carya illinoinensis
ClCG05G019190 Citrullus lanatus
ClCG07G008240 Citrullus lanatus
ClCG08G015330 Citrullus lanatus
COL.COLO4_14520 Corchorus olitorius
COL.COLO4_26372 Corchorus olitorius
COL.COLO4_34494 Corchorus olitorius
Cpa.g.sc214.7 Carica papaya
Cpa.g.sc64.51 Carica papaya
CsaV3_2G028460 Cucumis sativus L.
CsaV3_3G044890 Cucumis sativus L.
CsaV3_4G005860 Cucumis sativus L.
CSS0004031 Camellia sinensis var. sinensis
CSS0004080 Camellia sinensis var. sinensis
CSS0006048 Camellia sinensis var. sinensis
CSS0006500 Camellia sinensis var. sinensis
CSS0008652 Camellia sinensis var. sinensis
CSS0024339 Camellia sinensis var. sinensis
CSS0030172 Camellia sinensis var. sinensis
CSS0033771 Camellia sinensis var. sinensis
CSS0034292 Camellia sinensis var. sinensis
CSS0041336 Camellia sinensis var. sinensis
CSS0048907 Camellia sinensis var. sinensis
DCAR_008368 Daucus carota
DCAR_012753 Daucus carota
DCAR_019498 Daucus carota
DCAR_019507 Daucus carota
Dinv36045 Davidia involucrata
Dinv37621 Davidia involucrata
Dinv38924 Davidia involucrata
Dinv39384 Davidia involucrata
Duzib068G0782 Durio zibethinus
Duzib084G1165 Durio zibethinus
Duzib093G1233 Durio zibethinus
Duzib116G0639 Durio zibethinus
Duzib205G0405 Durio zibethinus
ECA232G2627 Erigeron canadensis
ECA240G2159 Erigeron canadensis
ECA246G0192 Erigeron canadensis
ECA246G0546 Erigeron canadensis
EL10Ac4g08664 Beta vulgaris
EL10Ac5g12801 Beta vulgaris
Eucgr.A00492 Eucalyptus grandis
Eucgr.D01830 Eucalyptus grandis
Eucgr.E00634 Eucalyptus grandis
Eucgr.F01534 Eucalyptus grandis
FAN04G2936 Fragaria x ananassa
FAN08G2515 Fragaria x ananassa
FAN13G0600 Fragaria x ananassa
FAN15G3335 Fragaria x ananassa
FAN18G1318 Fragaria x ananassa
FAN20G2416 Fragaria x ananassa
FAN27G2475 Fragaria x ananassa
FvH4_2g40250 Fragaria vesca
FvH4_5g02810 Fragaria vesca
Glyma.04G033900 Glycine max
Glyma.04G034000 Glycine max
Glyma.06G034100 Glycine max
Glyma.06G034200 Glycine max
Gohir.A03G019200 Gossypium hirsutum
Gohir.A03G117100 Gossypium hirsutum
Gohir.A05G196500 Gossypium hirsutum
Gohir.A06G011900 Gossypium hirsutum
Gohir.A09G192100 Gossypium hirsutum
Gohir.A12G230800 Gossypium hirsutum
Gohir.D02G093900 Gossypium hirsutum
Gohir.D03G149800 Gossypium hirsutum
Gohir.D05G199600 Gossypium hirsutum
Gohir.D06G009300 Gossypium hirsutum
Gohir.D09G186400 Gossypium hirsutum
Gohir.D12G231900 Gossypium hirsutum
Gorai.003G157100 Gossypium raimondii
Gorai.005G106500 Gossypium raimondii
Gorai.006G209100 Gossypium raimondii
Gorai.008G248200 Gossypium raimondii
Gorai.009G204900 Gossypium raimondii
Gorai.010G012100 Gossypium raimondii
GSVIVG01009650001 Vitis vinifera
GSVIVG01019028001 Vitis vinifera
GSVIVG01019388001 Vitis vinifera
HanXRQChr02g0059851 Helianthus annuus
HanXRQChr04g0112511 Helianthus annuus
HanXRQChr06g0165931 Helianthus annuus
HanXRQChr09g0268471 Helianthus annuus
HanXRQChr10g0287661 Helianthus annuus
HanXRQChr13g0416051 Helianthus annuus
HanXRQChr16g0508521 Helianthus annuus
HanXRQChr16g0509581 Helianthus annuus
HanXRQChr17g0533501 Helianthus annuus
Haze_08808 Corylus avellana
Haze_17625 Corylus avellana
Hma1.2p1_0203F.1_g086700 Hydrangea macrophylla
Hma1.2p1_0377F.1_g139420 Hydrangea macrophylla
HPP92_006081 Vanilla planifolia
HPP92_006082 Vanilla planifolia
HPP92_022634 Vanilla planifolia
HPP92_025968 Vanilla planifolia
Hund11453 Selenicereus undatus
Hund14831 Selenicereus undatus
Lalb_Chr08g0245801 Lupinus albus
Lalb_Chr11g0062421 Lupinus albus
Lalb_Chr14g0369081 Lupinus albus
Lalb_Chr24g0399051 Lupinus albus
Lj1g0015866 Lotus japonicus
Lj2A182T28 Lonicera japonica
Lj4A44T42 Lonicera japonica
Lj5g0003384 Lotus japonicus
Lj8A219G32 Lonicera japonica
Lsat_1_v5_gn_3_6221 Lactuca sativa
Lsat_1_v5_gn_4_122180 Lactuca sativa
Lsat_1_v5_gn_5_30060 Lactuca sativa
Lsat_1_v5_gn_6_86341 Lactuca sativa
Manes.01G060300 Manihot esculenta
Manes.02G021494 Manihot esculenta
Manes.05G163300 Manihot esculenta
Manes.18G029700 Manihot esculenta
MBI11_g14401_MAGBIO Magnolia biondii
MBI16_g13144_MAGBIO Magnolia biondii
MBI16_g32003_MAGBIO Magnolia biondii
MBI17_g17486_MAGBIO Magnolia biondii
MCO10G337 Micromonas commoda
MD06G1087400 Malus domestica
MD14G1108300 Malus domestica
MD15G1032300 Malus domestica
Medtr1g021970 Medicago truncatula
Medtr3g111670 Medicago truncatula
MELO3C003880.2 Cucumis melo
MELO3C010922.2 Cucumis melo
MELO3C016365.2 Cucumis melo
MELO3C032006.2 Cucumis melo
MELO3C034876.2 Cucumis melo
Migut.A00745 Erythranthe guttata
Migut.C00685 Erythranthe guttata
Migut.E01074 Erythranthe guttata
Migut.N00517 Erythranthe guttata
MSTRG.11973 Avicennia marina
MSTRG.1300 Avicennia marina
MSTRG.13850 Avicennia marina
MSTRG.1855 Avicennia marina
MSTRG.22293 Avicennia marina
MSTRG.25144 Avicennia marina
Nitab4.5_0000110g0260 Nicotiana tabacum
Nitab4.5_0001522g0050 Nicotiana tabacum
Nitab4.5_0003588g0060 Nicotiana tabacum
Nitab4.5_0013970g0010 Nicotiana tabacum
Nn1g01583 Nelumbo nucifera
Nn1g05096 Nelumbo nucifera
Nn1g05099 Nelumbo nucifera
Nn5g29495 Nelumbo nucifera
Nn6g33351 Nelumbo nucifera
Oeu011038.1 Olea europaea
Oeu025451.1 Olea europaea
Oeu034261.1 Olea europaea
Oeu042338.3 Olea europaea
Oeu056192.2 Olea europaea
Os02g0823200 Oryza sativa ssp. japonica
Os04g0166600 Oryza sativa ssp. japonica
Os10g0358600 Oryza sativa ssp. japonica
Peaxi162Scf00057g00095 Petunia axillaris
Peaxi162Scf00074g02027 Petunia axillaris
Peaxi162Scf01246g00007 Petunia axillaris
PGR031G2081 Punica granatum
PGR042G1581 Punica granatum
PGR083G1256 Punica granatum
PGSC0003DMG400012195 Solanum tuberosum
PGSC0003DMG400027854 Solanum tuberosum
Phvul.009G056200 Phaseolus vulgaris
Phvul.009G056300 Phaseolus vulgaris
Potri.001G101600 Populus trichocarpa
Potri.002G133500 Populus trichocarpa
Potri.003G130100 Populus trichocarpa
Potri.005G088101 Populus trichocarpa
Potri.014G041200 Populus trichocarpa
Pp3c15_4260 Physcomitrium patens
Pp3c20_1200 Physcomitrium patens
Pp3c23_21900 Physcomitrium patens
Pp3c8_24880 Physcomitrium patens
Pp3c9_6670 Physcomitrium patens
PRCOL_00001432 Prasinoderma coloniale
Prupe.1G383300 Prunus persica
Prupe.5G103700 Prunus persica
Psat5g017360 Pisum sativum
Psat6g010440 Pisum sativum
PSO170G0746 Papaver somniferum
PSO478G4038 Papaver somniferum
PSO541G4488 Papaver somniferum
PSO675G7700 Papaver somniferum
PSO700G0296 Papaver somniferum
PSO782G1066 Papaver somniferum
QL01p006357 Quercus lobata
QL02p007461 Quercus lobata
QL12p032462 Quercus lobata
RcHm_v2.0_Chr6g0300511 Rosa chinensis
RcHm_v2.0_Chr7g0197141 Rosa chinensis
Rhsim02G0233500 Rhododendron simsii
Rhsim07G0235900 Rhododendron simsii
RhsimUnG0160400 Rhododendron simsii
Sabra01G0076600 Salix brachista
Sabra02G0104300 Salix brachista
Sabra03G0092500 Salix brachista
Sabra14G0030000 Salix brachista
SalBow1G2216 Salvia bowleyana
SalBow8G2692 Salvia bowleyana
SalBow8G4225 Salvia bowleyana
Sc07g0009800 Simmondsia chinensis
Sc15g0006800 Simmondsia chinensis
Sc22g0005500 Simmondsia chinensis
Sed0000036 Sechium edule
Sed0005694 Sechium edule
Sed0011320 Sechium edule
Sed0012055 Sechium edule
SEGI_01522 Sequoiadendron giganteum
SEGI_11083 Sequoiadendron giganteum
SEGI_11329 Sequoiadendron giganteum
SEGI_28415 Sequoiadendron giganteum
SEGI_41171 Sequoiadendron giganteum
SGA_v2.0_scaffold144G35912 Striga asiatica
SGA_v2.0_scaffold14G07059 Striga asiatica
SGA_v2.0_scaffold48G18045 Striga asiatica
SHI08206 Sapria himalayana
SMO118G0267 Selaginella moellendorffii
SMO358G0319 Selaginella moellendorffii
Solyc04g079930.3 Solanum lycopersicum
Solyc08g081310.4 Solanum lycopersicum
Sopen04g033510 Solanum pennellii
Sopen08g029620 Solanum pennellii
Sp1g17240 Schrenkiella parvula
Sp5g30200 Schrenkiella parvula
TAR374G0729 Trochodendron aralioides
TAR375G0932 Trochodendron aralioides
TAR376G0229 Trochodendron aralioides
TAR381G1410 Trochodendron aralioides
TAR628G1701 Trochodendron aralioides
TAR629G1175 Trochodendron aralioides
THA.LOC104806417 Tarenaya hassleriana
THA.LOC104806440 Tarenaya hassleriana
THA.LOC104813845 Tarenaya hassleriana
THA.LOC104816111 Tarenaya hassleriana
THA.LOC104817899 Tarenaya hassleriana
THA.LOC104823590 Tarenaya hassleriana
Thecc.03G281900 Theobroma cacao
Thecc.05G014600 Theobroma cacao
Thecc.05G014700 Theobroma cacao
Thecc.08G022400 Theobroma cacao
Thecc.10G118200 Theobroma cacao
Thhalv10002707m.g Eutrema salsugineum
Thhalv10008586m.g Eutrema salsugineum
Thhalv10019057m.g Eutrema salsugineum
TPR.G12423 Trifolium pratense
TPR.G15765 Trifolium pratense
TWI12G1382 Tripterygium wilfordii
TWI38G0047 Tripterygium wilfordii
TWI56G1447 Tripterygium wilfordii
unitig_26.g9828 Utricularia gibba
unitig_32.g10981 Utricularia gibba
unitig_32.g11602 Utricularia gibba
unitig_748.g7426 Utricularia gibba
unitig_749.g13682 Utricularia gibba
unitig_749.g13842 Utricularia gibba
vmacro04506 Vaccinium macrocarpon
vmacro11388 Vaccinium macrocarpon
VMungo0720G1579 Vigna mungo
VMungo1309G0477 Vigna mungo
VMungo1309G1148 Vigna mungo
Zm00001eb288640 Zea mays
Zm00001eb348810 Zea mays

User provided reference genes

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