Gene: AT1G75060

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G75060
  • Transcript Identifier AT1G75060.3
  • Gene Type Coding gene
  • Location Chr1 : 28181792-28183285 : negative

Gene Family Information

  • ID HOM05D001831
  • #Genes/#Species 358/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G75060.3
  • uniprot Q9C9Q1

Descriptions

  • Description histone deacetylase complex subunit
  • Computational description unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19330.2); Has 104 Blast hits to 104 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042752
IEP
Gene Ontologyregulation of circadian rhythm1
GO:0006355
IBA
Gene Ontologyregulation of transcription, DNA-templated2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0003712
IBA
Gene Ontologytranscription coregulator activity2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0000118
IBA
Gene Ontologyhistone deacetylase complex2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038291 SAP30, C-terminal domain superfamily
IPR024145 Histone deacetylase complex subunit SAP30/SAP30-like
Mapman id Description
12.3.2.1.1.2.4 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.SNL-HDA19 histone deacetylase complex.associated component SAP30