Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p36660 Brassica napus
A02p10400 Brassica napus
A03p14700 Brassica napus
A05p32190 Brassica napus
A10p06930 Brassica napus
A10p11610 Brassica napus
Aa31LG3G10270 Aethionema arabicum
Aa31LG8G4520 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1638 Anthoceros agrestis
Actinidia01930 Actinidia chinensis
Actinidia05141 Actinidia chinensis
Actinidia05142 Actinidia chinensis
Actinidia05143 Actinidia chinensis
Actinidia05588 Actinidia chinensis
Actinidia09977 Actinidia chinensis
Actinidia18747 Actinidia chinensis
Actinidia18872 Actinidia chinensis
Actinidia35277 Actinidia chinensis
Actinidia39411 Actinidia chinensis
Ah.06g183590 Amaranthus hybridus
Ah.09g236040 Amaranthus hybridus
AL8G29640 Arabidopsis lyrata
Aqoxy1G02759 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9A532S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BX34NS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I7CVTV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IS52SX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QD99PL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VUVZ8L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WMI7HE Arachis hypogaea
AT3G17660 Arabidopsis thaliana
AT5G54310 Arabidopsis thaliana
ATR0618G028 Amborella trichopoda
ATR0693G358 Amborella trichopoda
Atru.chr10.1379 Acer truncatum
Atru.chr10.1992 Acer truncatum
Atru.chr2.2822 Acer truncatum
Atru.chr9.131 Acer truncatum
AUR62014729 Chenopodium quinoa
AUR62015604 Chenopodium quinoa
AUR62016911 Chenopodium quinoa
AUR62029315 Chenopodium quinoa
AUR62029316 Chenopodium quinoa
BcaB01g04292 Brassica carinata
BcaB04g18958 Brassica carinata
BcaB04g20827 Brassica carinata
BcaB05g22127 Brassica carinata
BcaB06g25826 Brassica carinata
BcaC01g06302 Brassica carinata
BcaC03g14347 Brassica carinata
BcaC04g20346 Brassica carinata
BcaC09g48726 Brassica carinata
BcaNung06848 Brassica carinata
BolC2t07815H Brassica oleracea
BolC3t14132H Brassica oleracea
BolC5t33609H Brassica oleracea
BolC9t57341H Brassica oleracea
BraA02t06106Z Brassica rapa
BraA03t10761Z Brassica rapa
BraA05t22049Z Brassica rapa
BraA10t43256Z Brassica rapa
C02p17150 Brassica napus
C03p17180 Brassica napus
C05p48730 Brassica napus
C09p44650 Brassica napus
CAN.G1110.45 Capsicum annuum
CAN.G162.102 Capsicum annuum
CAN.G289.29 Capsicum annuum
CAN.G474.5 Capsicum annuum
CAN.G5.21 Capsicum annuum
CAN.G929.27 Capsicum annuum
CANSAT11G0947 Cannabis sativa
CANSAT64G2226 Cannabis sativa
CARHR092990 Cardamine hirsuta
CARHR267610 Cardamine hirsuta
CARHR267620 Cardamine hirsuta
Carub.0003s1737 Capsella rubella
Carub.0008s1466 Capsella rubella
Ca_01807_v3 Cicer arietinum L.
Ca_11829_v3 Cicer arietinum L.
Ca_11847_v3 Cicer arietinum L.
Ca_30284_v3 Cicer arietinum L.
CBR_g23026 Chara braunii
CBR_g44290 Chara braunii
Cc02_g12560 Coffea canephora
Cc04_g08570 Coffea canephora
Cc05_g12650 Coffea canephora
CDE05G2509 Ceratophyllum demersum
CDE05G2813 Ceratophyllum demersum
Cfa020507 Carpinus fangiana
Ciclev10008023m.g Citrus clementina
Ciclev10015133m.g Citrus clementina
Ciclev10023943m.g Citrus clementina
CiPaw.09G159100 Carya illinoinensis
CiPaw.11G176200 Carya illinoinensis
CiPaw.12G122600 Carya illinoinensis
ClCG01G014890 Citrullus lanatus
ClCG11G018450 Citrullus lanatus
COL.COLO4_09476 Corchorus olitorius
COL.COLO4_31562 Corchorus olitorius
Cpa.g.sc111.57 Carica papaya
Cpa.g.sc27.110 Carica papaya
Cpa.g.sc3497.1 Carica papaya
Cpa.g.sc80.112 Carica papaya
Cre06.g304750 Chlamydomonas reinhardtii
Cre06.g307350 Chlamydomonas reinhardtii
CsaV3_1G007430 Cucumis sativus L.
CsaV3_3G044370 Cucumis sativus L.
CSS0019512 Camellia sinensis var. sinensis
CSS0030638 Camellia sinensis var. sinensis
CSS0036854 Camellia sinensis var. sinensis
CSS0038424 Camellia sinensis var. sinensis
CSS0044277 Camellia sinensis var. sinensis
CSS0047447 Camellia sinensis var. sinensis
CSS0049571 Camellia sinensis var. sinensis
DCAR_008704 Daucus carota
DCAR_023251 Daucus carota
DCAR_028124 Daucus carota
Dinv06415 Davidia involucrata
Dinv08339 Davidia involucrata
Dinv22368 Davidia involucrata
Dinv39807 Davidia involucrata
Dinv40505 Davidia involucrata
Duzib160G0474 Durio zibethinus
Duzib170G0781 Durio zibethinus
Duzib213G0386 Durio zibethinus
ECA234G0437 Erigeron canadensis
ECA236G4604 Erigeron canadensis
ECA246G2860 Erigeron canadensis
EL10Ac4g08064 Beta vulgaris
EL10Ac8g20620 Beta vulgaris
Eucgr.E03425 Eucalyptus grandis
Eucgr.F01081 Eucalyptus grandis
Eucgr.F03353 Eucalyptus grandis
Eucgr.H00640 Eucalyptus grandis
FAN08G2415 Fragaria x ananassa
FAN11G1122 Fragaria x ananassa
FAN13G0772 Fragaria x ananassa
FAN16G0668 Fragaria x ananassa
FAN18G4144 Fragaria x ananassa
FAN21G3168 Fragaria x ananassa
FAN21G3734 Fragaria x ananassa
FAN25G2984 Fragaria x ananassa
FAN25G3732 Fragaria x ananassa
FvH4_3g04220 Fragaria vesca
FvH4_3g20910 Fragaria vesca
FvH4_5g18300 Fragaria vesca
Glyma.06G254000 Glycine max
Glyma.08G057700 Glycine max
Glyma.09G165700 Glycine max
Glyma.11G205900 Glycine max
Glyma.12G147400 Glycine max
Glyma.12G219800 Glycine max
Glyma.13G281400 Glycine max
Glyma.14G105100 Glycine max
Glyma.16G215600 Glycine max
Gohir.A04G026300 Gossypium hirsutum
Gohir.A05G164601 Gossypium hirsutum
Gohir.A10G020100 Gossypium hirsutum
Gohir.A13G143700 Gossypium hirsutum
Gohir.D05G167600 Gossypium hirsutum
Gohir.D05G361700 Gossypium hirsutum
Gohir.D10G020900 Gossypium hirsutum
Gohir.D13G148500 Gossypium hirsutum
Gorai.009G172700 Gossypium raimondii
Gorai.009G431100 Gossypium raimondii
Gorai.011G022000 Gossypium raimondii
Gorai.013G166300 Gossypium raimondii
GSVIVG01006711001 Vitis vinifera
GSVIVG01014427001 Vitis vinifera
GSVIVG01029355001 Vitis vinifera
HanXRQChr05g0156461 Helianthus annuus
HanXRQChr11g0330861 Helianthus annuus
HanXRQChr16g0517781 Helianthus annuus
HanXRQChr17g0555691 Helianthus annuus
Haze_06559 Corylus avellana
Haze_09526 Corylus avellana
Haze_18382 Corylus avellana
Hma1.2p1_0144F.1_g064830 Hydrangea macrophylla
Hma1.2p1_0493F.1_g164920 Hydrangea macrophylla
Hma1.2p1_0493F.1_g164940 Hydrangea macrophylla
Hma1.2p1_1143F.1_g261090 Hydrangea macrophylla
HPP92_004181 Vanilla planifolia
Hund02208 Selenicereus undatus
Hund22388 Selenicereus undatus
Hund23628 Selenicereus undatus
Hund28860 Selenicereus undatus
Hund28863 Selenicereus undatus
Lalb_Chr14g0363721 Lupinus albus
Lalb_Chr16g0386631 Lupinus albus
Lalb_Chr19g0134481 Lupinus albus
Lalb_Chr20g0109991 Lupinus albus
Lalb_Chr22g0353921 Lupinus albus
Lalb_Chr24g0398521 Lupinus albus
Lalb_Chr25g0286721 Lupinus albus
Lj1A1212T54 Lonicera japonica
Lj1A852T42 Lonicera japonica
Lj2g0009909 Lotus japonicus
Lj3g0004057 Lotus japonicus
Lj8A160T65 Lonicera japonica
Lj8C160T3 Lonicera japonica
Lj9C413T10 Lonicera japonica
Lsat_1_v5_gn_4_57281 Lactuca sativa
Lsat_1_v5_gn_5_6881 Lactuca sativa
Lsat_1_v5_gn_7_106420 Lactuca sativa
Manes.02G213308 Manihot esculenta
Manes.03G116300 Manihot esculenta
Manes.15G083400 Manihot esculenta
Manes.16G021800 Manihot esculenta
Mapoly0041s0037 Marchantia polymorpha
Mapoly0062s0026 Marchantia polymorpha
MBI02_g35912_MAGBIO Magnolia biondii
MBI03_g13830_MAGBIO Magnolia biondii
MBI17_g16889_MAGBIO Magnolia biondii
MBI19_g17592_MAGBIO Magnolia biondii
MD03G1219400 Malus domestica
MD05G1324100 Malus domestica
MD06G1238800 Malus domestica
MD10G1301800 Malus domestica
MD10G1301900 Malus domestica
MD10G1302000 Malus domestica
MD11G1237500 Malus domestica
Medtr2g080950 Medicago truncatula
Medtr6g080710 Medicago truncatula
Medtr8g464390 Medicago truncatula
MELO3C002160.2 Cucumis melo
MELO3C018195.2 Cucumis melo
MELO3C033218.2 Cucumis melo
Migut.H01904 Erythranthe guttata
Migut.M00877 Erythranthe guttata
Migut.O00258 Erythranthe guttata
MSTRG.11554 Avicennia marina
MSTRG.14379 Avicennia marina
MSTRG.15209 Avicennia marina
Nitab4.5_0000207g0240 Nicotiana tabacum
Nitab4.5_0000297g0060 Nicotiana tabacum
Nitab4.5_0000782g0180 Nicotiana tabacum
Nitab4.5_0001320g0130 Nicotiana tabacum
Nitab4.5_0004366g0010 Nicotiana tabacum
Nitab4.5_0006956g0020 Nicotiana tabacum
Nitab4.5_0006956g0040 Nicotiana tabacum
Nitab4.5_0007109g0020 Nicotiana tabacum
Nitab4.5_0008686g0020 Nicotiana tabacum
Nn1g03920 Nelumbo nucifera
Nn1g06742 Nelumbo nucifera
Nn4g25126 Nelumbo nucifera
Oeu019362.1 Olea europaea
Oeu038402.1 Olea europaea
Os07g0563800 Oryza sativa ssp. japonica
Peaxi162Scf00137g00107 Petunia axillaris
Peaxi162Scf00171g00248 Petunia axillaris
Peaxi162Scf01216g00003 Petunia axillaris
PGR031G3759 Punica granatum
PGR042G1489 Punica granatum
PGR083G0315 Punica granatum
PGR083G2059 Punica granatum
PGSC0003DMG400005035 Solanum tuberosum
PGSC0003DMG400010153 Solanum tuberosum
PGSC0003DMG400019286 Solanum tuberosum
PGSC0003DMG400025029 Solanum tuberosum
Phvul.002G333500 Phaseolus vulgaris
Phvul.004G141200 Phaseolus vulgaris
Phvul.005G086400 Phaseolus vulgaris
Phvul.011G154950 Phaseolus vulgaris
Potri.001G406300 Populus trichocarpa
Potri.004G035800 Populus trichocarpa
Potri.011G044100 Populus trichocarpa
Potri.011G127000 Populus trichocarpa
Potri.012G036900 Populus trichocarpa
Pp3c13_24520 Physcomitrium patens
Pp3c26_280 Physcomitrium patens
PRCOL_00002725 Prasinoderma coloniale
PRCOL_00004508 Prasinoderma coloniale
Prupe.4G038100 Prunus persica
Prupe.4G189700 Prunus persica
Prupe.5G242700 Prunus persica
Psat1g121320 Pisum sativum
Psat1g121360 Pisum sativum
Psat4g138120 Pisum sativum
Psat5g246480 Pisum sativum
Psat7g000400 Pisum sativum
PSO063G5099 Papaver somniferum
PSO210G1311 Papaver somniferum
PSO782G1368 Papaver somniferum
PSO832G3723 Papaver somniferum
QL05p081763 Quercus lobata
QL05p081808 Quercus lobata
QL08p018279 Quercus lobata
RcHm_v2.0_Chr5g0006621 Rosa chinensis
RcHm_v2.0_Chr5g0007061 Rosa chinensis
RcHm_v2.0_Chr5g0035341 Rosa chinensis
RcHm_v2.0_Chr7g0177281 Rosa chinensis
Rhsim06G0151000 Rhododendron simsii
Rhsim06G0193100 Rhododendron simsii
Rhsim13G0139000 Rhododendron simsii
Rhsim13G0139400 Rhododendron simsii
Rhsim13G0174100 Rhododendron simsii
Sabra11G0030600 Salix brachista
Sabra11G0110300 Salix brachista
Sabra12G0025400 Salix brachista
Sabra16G0269900 Salix brachista
SalBow5G3713 Salvia bowleyana
SalBow7G4469 Salvia bowleyana
Sc16g0006800 Simmondsia chinensis
Sc17g0006510 Simmondsia chinensis
Sed0000369 Sechium edule
Sed0018213 Sechium edule
Sed0022677 Sechium edule
Sed0026984 Sechium edule
SEGI_12809 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10749 Striga asiatica
SGA_v2.0_scaffold73G24315 Striga asiatica
SGA_v2.0_scaffold77G25208 Striga asiatica
SHI21621 Sapria himalayana
SHI21624 Sapria himalayana
SMO169G0167 Selaginella moellendorffii
SMO358G0067 Selaginella moellendorffii
SMO367G0180 Selaginella moellendorffii
Solyc03g006610.3 Solanum lycopersicum
Solyc03g098500.4 Solanum lycopersicum
Solyc07g063550.3 Solanum lycopersicum
Solyc10g006850.4 Solanum lycopersicum
Sopen03g002620 Solanum pennellii
Sopen07g031730 Solanum pennellii
Sopen10g002760 Solanum pennellii
Sp6g16350 Schrenkiella parvula
TAR374G1360 Trochodendron aralioides
TAR627G0738 Trochodendron aralioides
TAR629G2333 Trochodendron aralioides
THA.LOC104799909 Tarenaya hassleriana
THA.LOC104811849 Tarenaya hassleriana
THA.LOC104820328 Tarenaya hassleriana
Thecc.06G197300 Theobroma cacao
Thecc.07G071700 Theobroma cacao
Thhalv10013423m.g Eutrema salsugineum
Thhalv10021376m.g Eutrema salsugineum
TPR.G17930 Trifolium pratense
TPR.G19891 Trifolium pratense
TPR.G22044 Trifolium pratense
TPR.G31347 Trifolium pratense
TPR.G31359 Trifolium pratense
TPR.G32871 Trifolium pratense
TPR.G39564 Trifolium pratense
TPR.G40070 Trifolium pratense
TPR.G8691 Trifolium pratense
TPR.G8941 Trifolium pratense
TWI15G0051 Tripterygium wilfordii
TWI38G1266 Tripterygium wilfordii
TWI39G1097 Tripterygium wilfordii
TWI63G0428 Tripterygium wilfordii
unitig_22.g5323 Utricularia gibba
unitig_746.g26681 Utricularia gibba
vmacro11815 Vaccinium macrocarpon
vmacro22281 Vaccinium macrocarpon
vmacro23295 Vaccinium macrocarpon
VMungo0251G1167 Vigna mungo
VMungo0464G1475 Vigna mungo
VMungo1127G0250 Vigna mungo
Zm00001eb106960 Zea mays
Zm00001eb172530 Zea mays
Zm00001eb184230 Zea mays
Zm00001eb241540 Zea mays
Zm00001eb324390 Zea mays
Zm00001eb389100 Zea mays

User provided reference genes

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