Gene: Sopen07g031730

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g031730
  • Transcript Identifier Sopen07g031730.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 77080917-77087450 : positive

Gene Family Information

  • ID HOM05D001802
  • #Genes/#Species 364/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g031730.1

Descriptions

  • Description A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. Regulates membrane trafficking and organ separation. | ARF-GAP domain 5 (AGD5) | FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding | INVOLVED IN: floral organ abscission, activation of ARF GTPase activity | LOCATED IN: cytosol, trans-Golgi network, endosome, nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein | BEST Arabidopsis thaliana protein match is: ARF-GAP domain 15
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035652
ISO
PLAZA Integrative Orthologyclathrin-coated vesicle cargo loading AT5G54310
GO:0090630
ISO
PLAZA Integrative Orthologyactivation of GTPase activity AT5G54310
GO:0050829
ISO
PLAZA Integrative Orthologydefense response to Gram-negative bacterium AT5G54310
GO:0060866
ISO
PLAZA Integrative Orthologyleaf abscission AT5G54310
GO:0060858
ISO
PLAZA Integrative Orthologyvesicle-mediated transport involved in floral organ abscission AT5G54310
GO:0030308
ISO
PLAZA Integrative Orthologynegative regulation of cell growth AT5G54310
GO:0010227
ISO
PLAZA Integrative Orthologyfloral organ abscission AT5G54310

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005096
IEA
InterProGTPase activator activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G54310
GO:0030276
ISO
PLAZA Integrative Orthologyclathrin binding AT5G54310

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT5G54310
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT5G54310
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G54310
GO:0030136
ISO
PLAZA Integrative Orthologyclathrin-coated vesicle AT5G54310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044520 ADP-ribosylation factor GTPase-activating protein AGD5/15
IPR038508 ArfGAP domain superfamily
IPR001164 Arf GTPase activating protein
IPR037278 ARFGAP/RecO-like zinc finger
Mapman id Description
22.3.2.3.2 Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase activation.class II ARF-GAP protein