Gene: COL.COLO4_31562

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_31562
  • Transcript Identifier COL.rna30277
  • Gene Type Coding gene
  • Location AWUE01020860.1 : 168832-170695 : positive

Gene Family Information

  • ID HOM05D001802
  • #Genes/#Species 364/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna30277
  • GenBank OMO65086.1
  • id gene31534
  • gene_name COLO4_31562
  • uniprot A0A1R3H4C4

Descriptions

  • Description putative ARF GTPase activator
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050790
IEA
GOA Databaseregulation of catalytic activity
GO:0035652
ISO
PLAZA Integrative Orthologyclathrin-coated vesicle cargo loading AT5G54310
GO:0090630
ISO
PLAZA Integrative Orthologyactivation of GTPase activity AT5G54310
GO:0050829
ISO
PLAZA Integrative Orthologydefense response to Gram-negative bacterium AT5G54310
GO:0060866
ISO
PLAZA Integrative Orthologyleaf abscission AT5G54310
GO:0060858
ISO
PLAZA Integrative Orthologyvesicle-mediated transport involved in floral organ abscission AT5G54310
GO:0030308
ISO
PLAZA Integrative Orthologynegative regulation of cell growth AT5G54310
GO:0010227
ISO
PLAZA Integrative Orthologyfloral organ abscission AT5G54310

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005096
IEA
GOA DatabaseGTPase activator activity
GO:0005096
IEA
InterProGTPase activator activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G54310
GO:0030276
ISO
PLAZA Integrative Orthologyclathrin binding AT5G54310

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT5G54310
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT5G54310
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G54310
GO:0030136
ISO
PLAZA Integrative Orthologyclathrin-coated vesicle AT5G54310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038508 ArfGAP domain superfamily
IPR044520 ADP-ribosylation factor GTPase-activating protein AGD5/15
Mapman id Description
35.1 not assigned.annotated