Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p30310 Brassica napus
A02p27170 Brassica napus
A03p66950 Brassica napus
A06p45510 Brassica napus
A06p45530 Brassica napus
A09p17840 Brassica napus
A09p17850 Brassica napus
A09p19770 Brassica napus
Aa31LG6G9960 Aethionema arabicum
Aa31LG7G5570 Aethionema arabicum
Aa31LG9G12580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3345 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3879 Anthoceros agrestis
Actinidia01607 Actinidia chinensis
Actinidia10636 Actinidia chinensis
Actinidia10637 Actinidia chinensis
Actinidia26171 Actinidia chinensis
Actinidia26172 Actinidia chinensis
Ah.02g118750 Amaranthus hybridus
Ah.02g123800 Amaranthus hybridus
AL1G51580 Arabidopsis lyrata
AL2G14670 Arabidopsis lyrata
AL8G18920 Arabidopsis lyrata
Aqoxy5G02054 Aquilegia oxysepala
Aqoxy7G03040 Aquilegia oxysepala
Aqoxy7G03041 Aquilegia oxysepala
Aqoxy7G03050 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4Q2LQE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6LW9UW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B6RQCR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QAA1TN Arachis hypogaea
AT1G43170 Arabidopsis thaliana
AT1G61580 Arabidopsis thaliana
ATR0022G057 Amborella trichopoda
ATR0665G587 Amborella trichopoda
ATR0753G037 Amborella trichopoda
Atru.chr1.865 Acer truncatum
Atru.chr13.2067 Acer truncatum
Atru.chr6.520 Acer truncatum
AUR62003639 Chenopodium quinoa
AUR62017949 Chenopodium quinoa
BcaB04g19407 Brassica carinata
BcaB04g20344 Brassica carinata
BcaB07g31073 Brassica carinata
BcaB07g31189 Brassica carinata
BcaC02g10571 Brassica carinata
BcaC03g16482 Brassica carinata
BcaC04g21993 Brassica carinata
BcaC04g22198 Brassica carinata
BcaC06g31436 Brassica carinata
BcaC06g31758 Brassica carinata
BcaC06g31849 Brassica carinata
BcaC06g34332 Brassica carinata
BolC1t03809H Brassica oleracea
BolC2t10332H Brassica oleracea
BolC4t24269H Brassica oleracea
BolC7t43568H Brassica oleracea
BolC9t55402H Brassica oleracea
BraA01t02785Z Brassica rapa
BraA01t03166Z Brassica rapa
BraA02t07734Z Brassica rapa
BraA06t27423Z Brassica rapa
BraA06t27425Z Brassica rapa
BraA09t37582Z Brassica rapa
C01p38430 Brassica napus
C02p42970 Brassica napus
C04p27360 Brassica napus
C07p30260 Brassica napus
C09p22190 Brassica napus
C09p25070 Brassica napus
C09p25090 Brassica napus
C09p25110 Brassica napus
CAN.G1352.12 Capsicum annuum
CAN.G1522.1 Capsicum annuum
CAN.G828.3 Capsicum annuum
CAN.G855.7 Capsicum annuum
CANSAT25G3130 Cannabis sativa
CANSAT54G1782 Cannabis sativa
CARHR035310 Cardamine hirsuta
CARHR050810 Cardamine hirsuta
CARHR174380 Cardamine hirsuta
CARHR181990 Cardamine hirsuta
Carub.0001s3448 Capsella rubella
Carub.0002s0361 Capsella rubella
Carub.0008s0665 Capsella rubella
Ca_10676_v3 Cicer arietinum L.
Ca_18317_v3 Cicer arietinum L.
Ca_18318_v3 Cicer arietinum L.
CBR_g16998 Chara braunii
CBR_g17012 Chara braunii
CBR_g362 Chara braunii
Cc02_g22160 Coffea canephora
Cc02_g23210 Coffea canephora
CDE02G3242 Ceratophyllum demersum
CDE04G2138 Ceratophyllum demersum
CDE05G1684 Ceratophyllum demersum
CDE07G0959 Ceratophyllum demersum
CDE09G1152 Ceratophyllum demersum
CDE11G0112 Ceratophyllum demersum
Cfa004485 Carpinus fangiana
Cfa025712 Carpinus fangiana
Ciclev10001453m.g Citrus clementina
Ciclev10001454m.g Citrus clementina
CiPaw.01G049700 Carya illinoinensis
CiPaw.05G004400 Carya illinoinensis
CiPaw.06G173900 Carya illinoinensis
CiPaw.15G014600 Carya illinoinensis
CiPaw.16G010000 Carya illinoinensis
ClCG08G002050 Citrullus lanatus
ClCG09G010960 Citrullus lanatus
ClCG11G013260 Citrullus lanatus
COL.COLO4_17720 Corchorus olitorius
COL.COLO4_29878 Corchorus olitorius
Cpa.g.sc113.41 Carica papaya
Cpa.g.sc192.20 Carica papaya
Cpa.g.sc49.101 Carica papaya
Cre10.g417700 Chlamydomonas reinhardtii
CsaV3_5G029770 Cucumis sativus L.
CsaV3_6G002550 Cucumis sativus L.
CSS0043418 Camellia sinensis var. sinensis
CSS0050022 Camellia sinensis var. sinensis
DCAR_006669 Daucus carota
DCAR_014443 Daucus carota
Dinv07487 Davidia involucrata
Dinv07488 Davidia involucrata
Dinv19417 Davidia involucrata
Dinv25883 Davidia involucrata
Dinv41060 Davidia involucrata
Dinv41061 Davidia involucrata
Duzib041G0669 Durio zibethinus
Duzib052G1257 Durio zibethinus
Duzib116G0451 Durio zibethinus
Duzib132G0294 Durio zibethinus
Duzib248G0203 Durio zibethinus
ECA236G3898 Erigeron canadensis
ECA238G1932 Erigeron canadensis
ECA246G1083 Erigeron canadensis
EL10Ac5g11557 Beta vulgaris
EL10Ac6g15235 Beta vulgaris
Eucgr.F02696 Eucalyptus grandis
Eucgr.F04208 Eucalyptus grandis
Eucgr.I02767 Eucalyptus grandis
FAN05G5340 Fragaria x ananassa
FAN09G0312 Fragaria x ananassa
FAN15G1497 Fragaria x ananassa
FAN20G0612 Fragaria x ananassa
FAN24G3165 Fragaria x ananassa
FAN27G2108 Fragaria x ananassa
FvH4_2g13300 Fragaria vesca
FvH4_6g25400 Fragaria vesca
Glyma.09G000700 Glycine max
Glyma.12G240600 Glycine max
Glyma.20G168100 Glycine max
Gohir.A02G063600 Gossypium hirsutum
Gohir.A03G211700 Gossypium hirsutum
Gohir.A04G133700 Gossypium hirsutum
Gohir.A05G244500 Gossypium hirsutum
Gohir.A05G270800 Gossypium hirsutum
Gohir.A05G270850 Gossypium hirsutum
Gohir.D01G123500 Gossypium hirsutum
Gohir.D01G175001 Gossypium hirsutum
Gohir.D02G069200 Gossypium hirsutum
Gohir.D04G176800 Gossypium hirsutum
Gohir.D05G245500 Gossypium hirsutum
Gohir.D05G272800 Gossypium hirsutum
Gorai.002G154500 Gossypium raimondii
Gorai.002G217200 Gossypium raimondii
Gorai.005G078300 Gossypium raimondii
Gorai.009G255300 Gossypium raimondii
Gorai.009G285900 Gossypium raimondii
Gorai.011G278000 Gossypium raimondii
Gorai.012G169700 Gossypium raimondii
GSVIVG01022284001 Vitis vinifera
GSVIVG01023241001 Vitis vinifera
GSVIVG01034555001 Vitis vinifera
HanXRQChr05g0162001 Helianthus annuus
HanXRQChr10g0278811 Helianthus annuus
HanXRQChr11g0320281 Helianthus annuus
HanXRQChr11g0329731 Helianthus annuus
Haze_10041 Corylus avellana
Haze_17783 Corylus avellana
Haze_27138 Corylus avellana
Hma1.2p1_0081F.1_g042350 Hydrangea macrophylla
Hma1.2p1_0240F.1_g100380 Hydrangea macrophylla
Hma1.2p1_0633F.1_g192670 Hydrangea macrophylla
Hma1.2p1_0884F.1_g232470 Hydrangea macrophylla
HPP92_000068 Vanilla planifolia
HPP92_006833 Vanilla planifolia
Hund03506 Selenicereus undatus
Hund15452 Selenicereus undatus
Hund19622 Selenicereus undatus
Lalb_Chr02g0141471 Lupinus albus
Lalb_Chr06g0161671 Lupinus albus
Lalb_Chr07g0189221 Lupinus albus
Lalb_Chr21g0305531 Lupinus albus
Lj4A699T46 Lonicera japonica
Lj4g0015693 Lotus japonicus
Lj5A266T82 Lonicera japonica
Lj5g0011306 Lotus japonicus
Lj7A375T62 Lonicera japonica
Lsat_1_v5_gn_6_100660 Lactuca sativa
Lsat_1_v5_gn_7_75821 Lactuca sativa
Lsat_1_v5_gn_9_41900 Lactuca sativa
Manes.07G024250 Manihot esculenta
Manes.07G024300 Manihot esculenta
Manes.07G024400 Manihot esculenta
Manes.09G038800 Manihot esculenta
Manes.10G117800 Manihot esculenta
Manes.10G118000 Manihot esculenta
Manes.10G118200 Manihot esculenta
Manes.10G151400 Manihot esculenta
Manes.11G132800 Manihot esculenta
Mapoly0001s0237 Marchantia polymorpha
MBI06_g36482_MAGBIO Magnolia biondii
MBI17_g39736_MAGBIO Magnolia biondii
MBI17_g44941_MAGBIO Magnolia biondii
MCO01G195 Micromonas commoda
MD04G1044600 Malus domestica
MD08G1242000 Malus domestica
MD13G1271300 Malus domestica
MD15G1435700 Malus domestica
Medtr1g098540 Medicago truncatula
Medtr4g094398 Medicago truncatula
MELO3C011819.2 Cucumis melo
MELO3C025030.2 Cucumis melo
Migut.B00656 Erythranthe guttata
Migut.B00657 Erythranthe guttata
Migut.N00841 Erythranthe guttata
Migut.O00633 Erythranthe guttata
MSTRG.16543 Avicennia marina
MSTRG.27835 Avicennia marina
MSTRG.27862 Avicennia marina
MSTRG.5245 Avicennia marina
Nitab4.5_0000078g0370 Nicotiana tabacum
Nitab4.5_0000787g0150 Nicotiana tabacum
Nitab4.5_0003071g0030 Nicotiana tabacum
Nitab4.5_0003274g0020 Nicotiana tabacum
Nitab4.5_0003615g0010 Nicotiana tabacum
Nitab4.5_0006171g0040 Nicotiana tabacum
Nitab4.5_0009907g0010 Nicotiana tabacum
Nn1g06049 Nelumbo nucifera
Nn5g28789 Nelumbo nucifera
Oeu012737.1 Olea europaea
Oeu044830.1 Olea europaea
Oeu045923.1 Olea europaea
Oeu049805.1 Olea europaea
Os11g0168200 Oryza sativa ssp. japonica
Os12g0167900 Oryza sativa ssp. japonica
Peaxi162Scf00003g03748 Petunia axillaris
Peaxi162Scf00011g01318 Petunia axillaris
Peaxi162Scf01807g00002 Petunia axillaris
PGR044G0739 Punica granatum
PGR142G2949 Punica granatum
PGSC0003DMG400024915 Solanum tuberosum
PGSC0003DMG400029760 Solanum tuberosum
PGSC0003DMG400042942 Solanum tuberosum
Phvul.007G081800 Phaseolus vulgaris
Phvul.008G162000 Phaseolus vulgaris
Phvul.011G214700 Phaseolus vulgaris
Potri.002G066200 Populus trichocarpa
Potri.003G008300 Populus trichocarpa
Potri.005G194500 Populus trichocarpa
Pp3c10_25460 Physcomitrium patens
Pp3c5_27000 Physcomitrium patens
Pp3c5_27030 Physcomitrium patens
Pp3c6_2960 Physcomitrium patens
PRCOL_00000471 Prasinoderma coloniale
Prupe.1G579300 Prunus persica
Prupe.8G036200 Prunus persica
Psat6g192200 Pisum sativum
Psat6g192240 Pisum sativum
Psat7g095040 Pisum sativum
Psat7g095240 Pisum sativum
PSO013G0179 Papaver somniferum
PSO063G1592 Papaver somniferum
PSO063G5313 Papaver somniferum
PSO170G2396 Papaver somniferum
PSO170G3832 Papaver somniferum
PSO700G0336 Papaver somniferum
PSO782G5654 Papaver somniferum
QL02p037802 Quercus lobata
QL02p038768 Quercus lobata
QL02p100722 Quercus lobata
RcHm_v2.0_Chr1g0361591 Rosa chinensis
RcHm_v2.0_Chr1g0361651 Rosa chinensis
RcHm_v2.0_Chr2g0125851 Rosa chinensis
RcHm_v2.0_Chr6g0274741 Rosa chinensis
RcHm_v2.0_Chr7g0220671 Rosa chinensis
Rhsim05G0114400 Rhododendron simsii
Rhsim11G0085900 Rhododendron simsii
Sabra02G0052800 Salix brachista
Sabra03G0003800 Salix brachista
Sabra03G0004100 Salix brachista
Sabra05G0148000 Salix brachista
SalBow3G1166 Salvia bowleyana
SalBow3G4094 Salvia bowleyana
SalBow6G1535 Salvia bowleyana
SalBow6G2513 Salvia bowleyana
Sc03g0004680 Simmondsia chinensis
Sc07g0001610 Simmondsia chinensis
Sc16g0004060 Simmondsia chinensis
Sed0004138 Sechium edule
Sed0007999 Sechium edule
Sed0016446 Sechium edule
Sed0026114 Sechium edule
SEGI_02346 Sequoiadendron giganteum
SEGI_18668 Sequoiadendron giganteum
SEGI_20656 Sequoiadendron giganteum
SEGI_21569 Sequoiadendron giganteum
SEGI_28633 Sequoiadendron giganteum
SEGI_38320 Sequoiadendron giganteum
SGA_v2.0_scaffold100G29535 Striga asiatica
SGA_v2.0_scaffold110G31274 Striga asiatica
SGA_v2.0_scaffold145G36062 Striga asiatica
SGA_v2.0_scaffold1G00339 Striga asiatica
SGA_v2.0_scaffold292G47361 Striga asiatica
SMO119G0391 Selaginella moellendorffii
Solyc01g103510.4 Solanum lycopersicum
Solyc01g104590.3 Solanum lycopersicum
Solyc01g150127.1 Solanum lycopersicum
Solyc05g150151.1 Solanum lycopersicum
Solyc09g059155.1 Solanum lycopersicum
Sopen01g045870 Solanum pennellii
Sopen01g047100 Solanum pennellii
Sp2g03000 Schrenkiella parvula
SpUn1572_0010 Schrenkiella parvula
TAR376G1159 Trochodendron aralioides
TAR381G0784 Trochodendron aralioides
TAR381G0856 Trochodendron aralioides
TAR381G1228 Trochodendron aralioides
TAR626G0630 Trochodendron aralioides
TAR626G0793 Trochodendron aralioides
TAR628G0476 Trochodendron aralioides
THA.LOC104804673 Tarenaya hassleriana
THA.LOC104806862 Tarenaya hassleriana
THA.LOC104816814 Tarenaya hassleriana
THA.LOC104823698 Tarenaya hassleriana
Thecc.02G018000 Theobroma cacao
Thecc.08G155300 Theobroma cacao
Thhalv10003224m.g Eutrema salsugineum
Thhalv10003226m.g Eutrema salsugineum
Thhalv10023521m.g Eutrema salsugineum
TPR.G16971 Trifolium pratense
TPR.G17033 Trifolium pratense
TPR.G17049 Trifolium pratense
TPR.G18294 Trifolium pratense
TPR.G23795 Trifolium pratense
TPR.G25679 Trifolium pratense
TPR.G29550 Trifolium pratense
TPR.G31648 Trifolium pratense
TPR.G37131 Trifolium pratense
TPR.G7154 Trifolium pratense
TWI23G1122 Tripterygium wilfordii
TWI32G0859 Tripterygium wilfordii
TWI34G0250 Tripterygium wilfordii
unitig_21.g20534 Utricularia gibba
unitig_61.g26383 Utricularia gibba
unitig_61.g26384 Utricularia gibba
unitig_699.g19860 Utricularia gibba
vmacro01471 Vaccinium macrocarpon
vmacro19864 Vaccinium macrocarpon
VMungo0720G2127 Vigna mungo
VMungo1127G2263 Vigna mungo
Zm00001eb012410 Zea mays
Zm00001eb072110 Zea mays
Zm00001eb082930 Zea mays
Zm00001eb082960 Zea mays
Zm00001eb091870 Zea mays
Zm00001eb091900 Zea mays

User provided reference genes

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