Gene: Sopen01g047100

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g047100
  • Transcript Identifier Sopen01g047100.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 103659174-103661696 : negative

Gene Family Information

  • ID HOM05D001759
  • #Genes/#Species 369/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g047100.1

Descriptions

  • Description 60S ribosomal protein L3 OS:Oryza sativa subsp. japonica GN:RPL3 PE:2 SV:2, Encodes a cytoplasmic ribosomal protein. | ribosomal protein 1 (RP1) | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation, embryo development ending in seed dormancy | LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 , Ribosomal protein L3, conserved site , Translation elongation/initiation factor/Ribosomal, beta-barrel | BEST Arabidopsis thaliana protein match is: R-protein L3 B ., Ribosomal protein L3
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G43170

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
InterProribosome
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G43170
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT1G43170
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT1G43170
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G43170
GO:0022625
ISO
PLAZA Integrative Orthologycytosolic large ribosomal subunit AT1G43170
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT1G43170
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G43170
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT1G43170
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G43170
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT1G43170

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009000 Translation protein, beta-barrel domain superfamily
IPR000597 Ribosomal protein L3
IPR044892 Ribosomal protein L3, domain 3, archaeal type superfamily
IPR045077 Ribosomal protein L3, archaeal/eukaryotic type
Mapman id Description
17.1.2.1.1 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL3