Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p16240 Brassica napus
A03p26000 Brassica napus
A03p55640 Brassica napus
A04p00490 Brassica napus
A05p00320 Brassica napus
A06p19670 Brassica napus
A08p21330 Brassica napus
A09p54690 Brassica napus
Aa31LG10G16520 Aethionema arabicum
Aa31LG1G28950 Aethionema arabicum
Aa31LG7G10840 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2498 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3926 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_276.2 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_276.3 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_277.2 Anthoceros agrestis
Actinidia05883 Actinidia chinensis
Actinidia19574 Actinidia chinensis
Actinidia19575 Actinidia chinensis
Actinidia30865 Actinidia chinensis
Actinidia36219 Actinidia chinensis
Ah.10g038190 Amaranthus hybridus
AL2G35450 Arabidopsis lyrata
AL4G47190 Arabidopsis lyrata
AL5G45640 Arabidopsis lyrata
AL7G28230 Arabidopsis lyrata
AL8G21100 Arabidopsis lyrata
Aqoxy3G03745 Aquilegia oxysepala
Aqoxy5G03255 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1ALG4A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CJMR3A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KS2ZSY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XZI9IJ Arachis hypogaea
AT2G47610 Arabidopsis thaliana
AT3G62870 Arabidopsis thaliana
ATR0582G325 Amborella trichopoda
ATR0582G348 Amborella trichopoda
ATR0827G145 Amborella trichopoda
ATR0827G172 Amborella trichopoda
Atru.chr1.501 Acer truncatum
Atru.chr12.1985 Acer truncatum
Atru.chr2.375 Acer truncatum
Atru.chr6.1384 Acer truncatum
Atru.chr6.1855 Acer truncatum
AUR62013776 Chenopodium quinoa
AUR62023380 Chenopodium quinoa
BcaB02g07315 Brassica carinata
BcaB02g08093 Brassica carinata
BcaB02g08756 Brassica carinata
BcaB03g12452 Brassica carinata
BcaC01g05027 Brassica carinata
BcaC02g10318 Brassica carinata
BcaC02g11963 Brassica carinata
BcaC02g12554 Brassica carinata
BcaC06g32847 Brassica carinata
BcaC07g38171 Brassica carinata
BcaC07g40750 Brassica carinata
BcaC07g40752 Brassica carinata
BcaC07g42740 Brassica carinata
BcaC08g45242 Brassica carinata
BcaNung07128 Brassica carinata
BolC1t01952H Brassica oleracea
BolC3t15450H Brassica oleracea
BolC4t24570H Brassica oleracea
BolC4t25858H Brassica oleracea
BolC7t45878H Brassica oleracea
BolC8t48593H Brassica oleracea
BolC8t51342H Brassica oleracea
BraA01t01560Z Brassica rapa
BraA03t11816Z Brassica rapa
BraA03t14631Z Brassica rapa
BraA04t15768Z Brassica rapa
BraA05t19029Z Brassica rapa
BraA09t40880Z Brassica rapa
C01p20230 Brassica napus
C03p30990 Brassica napus
C04p00240 Brassica napus
C04p30390 Brassica napus
C04p42890 Brassica napus
C07p53880 Brassica napus
CAN.G849.5 Capsicum annuum
CANSAT56G3505 Cannabis sativa
CANSAT56G4170 Cannabis sativa
CANSAT80G2683 Cannabis sativa
CARHR143010 Cardamine hirsuta
CARHR173130 Cardamine hirsuta
CARHR232350 Cardamine hirsuta
Carub.0004s3034 Capsella rubella
Carub.0005s2952 Capsella rubella
Carub.0007s1609 Capsella rubella
Ca_03038_v3 Cicer arietinum L.
Ca_14733_v3 Cicer arietinum L.
Ca_27640_v3 Cicer arietinum L.
Ca_30068_v3 Cicer arietinum L.
CBR_g19668 Chara braunii
Cc00_g20230 Coffea canephora
Cc00_g20240 Coffea canephora
Cc00_g31610 Coffea canephora
CDE02G2207 Ceratophyllum demersum
CDE06G1216 Ceratophyllum demersum
CDE06G1885 Ceratophyllum demersum
Ciclev10016329m.g Citrus clementina
Ciclev10032494m.g Citrus clementina
CiPaw.03G058500 Carya illinoinensis
CiPaw.04G039600 Carya illinoinensis
ClCG01G005240 Citrullus lanatus
ClCG01G005250 Citrullus lanatus
ClCG05G013780 Citrullus lanatus
COL.COLO4_13297 Corchorus olitorius
COL.COLO4_16642 Corchorus olitorius
Cpa.g.c38539 Carica papaya
Cpa.g.sc9.46 Carica papaya
Cre12.g529651 Chlamydomonas reinhardtii
CsaV3_3G026840 Cucumis sativus L.
CsaV3_5G005520 Cucumis sativus L.
CsaV3_5G005530 Cucumis sativus L.
CSS0000645 Camellia sinensis var. sinensis
CSS0017476 Camellia sinensis var. sinensis
DCAR_000953 Daucus carota
DCAR_021805 Daucus carota
Dinv11195 Davidia involucrata
Dinv23177 Davidia involucrata
Dinv25643 Davidia involucrata
Dinv33318 Davidia involucrata
Dinv34906 Davidia involucrata
Duzib068G1334 Durio zibethinus
Duzib084G0252 Durio zibethinus
Duzib147G0990 Durio zibethinus
Duzib205G0490 Durio zibethinus
ECA232G3142 Erigeron canadensis
ECA246G0541 Erigeron canadensis
ECA247G0405 Erigeron canadensis
EL10Ac2g04435 Beta vulgaris
Eucgr.B00159 Eucalyptus grandis
Eucgr.H03352 Eucalyptus grandis
Eucgr.I01626 Eucalyptus grandis
FAN02G1991 Fragaria x ananassa
FAN05G0226 Fragaria x ananassa
FAN06G3776 Fragaria x ananassa
FAN09G0604 Fragaria x ananassa
FAN10G1188 Fragaria x ananassa
FAN10G3661 Fragaria x ananassa
FAN14G2401 Fragaria x ananassa
FvH4_6g53860 Fragaria vesca
FvH4_7g05790 Fragaria vesca
Glyma.02G002800 Glycine max
Glyma.10G006200 Glycine max
Glyma.11G103700 Glycine max
Glyma.12G028500 Glycine max
Gohir.A03G054300 Gossypium hirsutum
Gohir.A07G049000 Gossypium hirsutum
Gohir.A09G244350 Gossypium hirsutum
Gohir.A09G247400 Gossypium hirsutum
Gohir.A11G037200 Gossypium hirsutum
Gohir.A12G191200 Gossypium hirsutum
Gohir.D03G112600 Gossypium hirsutum
Gohir.D07G053200 Gossypium hirsutum
Gohir.D09G248100 Gossypium hirsutum
Gohir.D11G040500 Gossypium hirsutum
Gohir.D12G193300 Gossypium hirsutum
Gorai.001G056300 Gossypium raimondii
Gorai.003G118800 Gossypium raimondii
Gorai.006G272400 Gossypium raimondii
Gorai.007G043600 Gossypium raimondii
Gorai.008G208100 Gossypium raimondii
GSVIVG01008585001 Vitis vinifera
GSVIVG01033050001 Vitis vinifera
GSVIVG01036540001 Vitis vinifera
HanXRQChr02g0032451 Helianthus annuus
HanXRQChr02g0044021 Helianthus annuus
HanXRQChr04g0106351 Helianthus annuus
HanXRQChr04g0107441 Helianthus annuus
HanXRQChr05g0140861 Helianthus annuus
HanXRQChr05g0152871 Helianthus annuus
HanXRQChr07g0195491 Helianthus annuus
HanXRQChr09g0269911 Helianthus annuus
HanXRQChr10g0314781 Helianthus annuus
HanXRQChr11g0332971 Helianthus annuus
HanXRQChr11g0352401 Helianthus annuus
Haze_07178 Corylus avellana
Haze_14902 Corylus avellana
Haze_26665 Corylus avellana
HPP92_013604 Vanilla planifolia
HPP92_028594 Vanilla planifolia
HPP92_028595 Vanilla planifolia
Hund13668 Selenicereus undatus
Hund16237 Selenicereus undatus
Lalb_Chr00c01g0403851 Lupinus albus
Lalb_Chr01g0001571 Lupinus albus
Lalb_Chr01g0001581 Lupinus albus
Lalb_Chr03g0024901 Lupinus albus
Lalb_Chr19g0139311 Lupinus albus
Lalb_Chr22g0360241 Lupinus albus
Lj2A257T66 Lonicera japonica
Lj2g0003509 Lotus japonicus
Lj3g0006634 Lotus japonicus
Lj3g0008761 Lotus japonicus
Lj7A612T77 Lonicera japonica
Lju41A54T13 Lonicera japonica
Lsat_1_v5_gn_0_7320 Lactuca sativa
Lsat_1_v5_gn_0_7401 Lactuca sativa
Lsat_1_v5_gn_1_16101 Lactuca sativa
Lsat_1_v5_gn_4_101461 Lactuca sativa
Lsat_1_v5_gn_4_115860 Lactuca sativa
Lsat_1_v5_gn_4_128980 Lactuca sativa
Lsat_1_v5_gn_5_25201 Lactuca sativa
Lsat_1_v5_gn_8_150280 Lactuca sativa
Lsat_1_v5_gn_8_45161 Lactuca sativa
Lsat_1_v5_gn_8_45181 Lactuca sativa
Lsat_1_v5_gn_8_48540 Lactuca sativa
Manes.01G104000 Manihot esculenta
Manes.02G059800 Manihot esculenta
Manes.06G041350 Manihot esculenta
Manes.14G162100 Manihot esculenta
Mapoly0030s0100 Marchantia polymorpha
Mapoly0072s0006 Marchantia polymorpha
MBI07_g02008_MAGBIO Magnolia biondii
MBI09_g13285_MAGBIO Magnolia biondii
MBI11_g31940_MAGBIO Magnolia biondii
MBI11_g38273_MAGBIO Magnolia biondii
MBI16_g07041_MAGBIO Magnolia biondii
MBI16_g35577_MAGBIO Magnolia biondii
MBI18_g34218_MAGBIO Magnolia biondii
MCO11G413 Micromonas commoda
MD06G1137700 Malus domestica
MD09G1007800 Malus domestica
MD14G1152500 Malus domestica
MD17G1002900 Malus domestica
MD17G1011700 Malus domestica
Medtr4g074260 Medicago truncatula
Medtr7g027235 Medicago truncatula
MELO3C005401.2 Cucumis melo
MELO3C005402.2 Cucumis melo
MELO3C014906.2 Cucumis melo
MELO3C030166.2 Cucumis melo
MELO3C033151.2 Cucumis melo
MELO3C035608.2 Cucumis melo
Migut.F00044 Erythranthe guttata
Migut.K01478 Erythranthe guttata
MSTRG.3062 Avicennia marina
MSTRG.3253 Avicennia marina
Nitab4.5_0000009g0420 Nicotiana tabacum
Nitab4.5_0000748g0070 Nicotiana tabacum
Nitab4.5_0000927g0050 Nicotiana tabacum
Nitab4.5_0007335g0020 Nicotiana tabacum
Nitab4.5_0007657g0020 Nicotiana tabacum
Nitab4.5_0011014g0010 Nicotiana tabacum
Nn3g16376 Nelumbo nucifera
Nn3g17532 Nelumbo nucifera
Nn4g22237 Nelumbo nucifera
Nn4g23532 Nelumbo nucifera
Oeu035243.1 Olea europaea
Oeu035244.1 Olea europaea
Oeu048929.1 Olea europaea
Os01g0924800 Oryza sativa ssp. japonica
Os08g0326400 Oryza sativa ssp. japonica
Os09g0507800 Oryza sativa ssp. japonica
Peaxi162Scf00078g01013 Petunia axillaris
Peaxi162Scf00688g00225 Petunia axillaris
Peaxi162Scf00818g00326 Petunia axillaris
PGR083G1977 Punica granatum
PGR142G4028 Punica granatum
PGSC0003DMG400003467 Solanum tuberosum
PGSC0003DMG400006207 Solanum tuberosum
PGSC0003DMG400022511 Solanum tuberosum
PGSC0003DMG400033137 Solanum tuberosum
Phvul.007G274200 Phaseolus vulgaris
Phvul.011G031900 Phaseolus vulgaris
Potri.001G326400 Populus trichocarpa
Potri.004G113800 Populus trichocarpa
Potri.004G113900 Populus trichocarpa
Potri.017G100800 Populus trichocarpa
Potri.017G101000 Populus trichocarpa
Pp3c13_24420 Physcomitrium patens
Pp3c13_24450 Physcomitrium patens
Pp3c15_290 Physcomitrium patens
Pp3c26_330 Physcomitrium patens
Pp3c26_350 Physcomitrium patens
Pp3c26_360 Physcomitrium patens
Pp3c9_380 Physcomitrium patens
PRCOL_00004247 Prasinoderma coloniale
Prupe.3G309200 Prunus persica
Prupe.5G147500 Prunus persica
Psat0s1374g0040 Pisum sativum
Psat0s4766g0080 Pisum sativum
Psat0s5300g0040 Pisum sativum
Psat0s5922g0040 Pisum sativum
Psat0s5922g0080 Pisum sativum
Psat0ss5162g0040 Pisum sativum
Psat3g166400 Pisum sativum
Psat3g173960 Pisum sativum
Psat7g174080 Pisum sativum
PSO063G2708 Papaver somniferum
PSO063G7302 Papaver somniferum
PSO339G2523 Papaver somniferum
PSO384G2758 Papaver somniferum
PSO478G1162 Papaver somniferum
PSO782G3967 Papaver somniferum
PSO782G4871 Papaver somniferum
QL02p070780 Quercus lobata
QL02p070785 Quercus lobata
RcHm_v2.0_Chr1g0332881 Rosa chinensis
RcHm_v2.0_Chr2g0176011 Rosa chinensis
RcHm_v2.0_Chr3g0487691 Rosa chinensis
RcHm_v2.0_Chr5g0033111 Rosa chinensis
RcHm_v2.0_Chr5g0038601 Rosa chinensis
Rhsim08G0041500 Rhododendron simsii
Rhsim10G0004300 Rhododendron simsii
Sabra04G0071500 Salix brachista
Sabra04G0071600 Salix brachista
Sabra16G0208900 Salix brachista
Sabra17G0086700 Salix brachista
Sabra17G0086800 Salix brachista
SalBow1G3623 Salvia bowleyana
SalBow4G0471 Salvia bowleyana
SalBow4G2221 Salvia bowleyana
SalBow6G5806 Salvia bowleyana
Sc10g0000580 Simmondsia chinensis
Sc11g0008850 Simmondsia chinensis
Sc22g0003670 Simmondsia chinensis
Sed0001982 Sechium edule
Sed0004253 Sechium edule
Sed0013195 Sechium edule
Sed0024290 Sechium edule
SEGI_15920 Sequoiadendron giganteum
SEGI_21353 Sequoiadendron giganteum
SGA_v2.0_scaffold154G37201 Striga asiatica
SGA_v2.0_scaffold253G45174 Striga asiatica
SGA_v2.0_scaffold44G16930 Striga asiatica
SGA_v2.0_scaffold47G17617 Striga asiatica
SMO147G0004 Selaginella moellendorffii
SMO351G0271 Selaginella moellendorffii
Solyc01g020290.1 Solanum lycopersicum
Solyc01g097760.3 Solanum lycopersicum
Solyc06g050120.3 Solanum lycopersicum
Solyc06g064460.4 Solanum lycopersicum
Solyc06g064470.4 Solanum lycopersicum
Solyc10g018810.1 Solanum lycopersicum
Solyc11g042870.1 Solanum lycopersicum
Sopen01g015160 Solanum pennellii
Sopen01g041360 Solanum pennellii
Sopen06g015510 Solanum pennellii
Sopen06g022930 Solanum pennellii
Sopen06g022940 Solanum pennellii
Sopen10g008670 Solanum pennellii
Sp4g29540 Schrenkiella parvula
Sp5g00650 Schrenkiella parvula
Sp7g22930 Schrenkiella parvula
Sp7g22950 Schrenkiella parvula
TAR371G0960 Trochodendron aralioides
TAR371G1276 Trochodendron aralioides
TAR374G0974 Trochodendron aralioides
TAR622G0990 Trochodendron aralioides
TAR629G3102 Trochodendron aralioides
THA.LOC104798832 Tarenaya hassleriana
THA.LOC104808824 Tarenaya hassleriana
THA.LOC104811571 Tarenaya hassleriana
THA.LOC104817493 Tarenaya hassleriana
THA.LOC104825023 Tarenaya hassleriana
THA.LOC104826637 Tarenaya hassleriana
Thecc.03G134200 Theobroma cacao
Thecc.04G040900 Theobroma cacao
Thhalv10001595m.g Eutrema salsugineum
Thhalv10006188m.g Eutrema salsugineum
Thhalv10026044m.g Eutrema salsugineum
Thhalv10027478m.g Eutrema salsugineum
TPR.G21571 Trifolium pratense
TPR.G8568 Trifolium pratense
TWI14G0401 Tripterygium wilfordii
TWI23G0812 Tripterygium wilfordii
TWI32G0169 Tripterygium wilfordii
TWI34G1931 Tripterygium wilfordii
TWI60G1596 Tripterygium wilfordii
TWI60G1630 Tripterygium wilfordii
unitig_699.g19835 Utricularia gibba
unitig_747.g21284 Utricularia gibba
unitig_8.g3613 Utricularia gibba
vmacro00222 Vaccinium macrocarpon
vmacro05977 Vaccinium macrocarpon
vmacro07166 Vaccinium macrocarpon
vmacro18360 Vaccinium macrocarpon
VMungo0720G1001 Vigna mungo
VMungo1127G2146 Vigna mungo
Zm00001eb036790 Zea mays
Zm00001eb102500 Zea mays
Zm00001eb317810 Zea mays

User provided reference genes

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