Gene: SGA_v2.0_scaffold47G17617

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold47G17617
  • Transcript Identifier SGA_v2.0_scaffold47T17617
  • Gene Type Coding gene
  • Location scaffold47 : 863626-869049 : negative

Gene Family Information

  • ID HOM05D001675
  • #Genes/#Species 386/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product 60S ribosomal protein L7a
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G62870
GO:0003735
ISO
PLAZA Integrative Orthologystructural constituent of ribosome AT3G62870
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G62870

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G47610
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT3G62870
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G62870
GO:0022625
ISO
PLAZA Integrative Orthologycytosolic large ribosomal subunit AT3G62870
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT3G62870
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G47610
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT3G62870

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029064 50S ribosomal protein L30e-like
IPR039540 UBL3-like, ubiquitin domain
IPR018492 Ribosomal protein L7Ae/L8/Nhp2 family
IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR001921 Ribosomal protein L7A/L8
IPR029071 Ubiquitin-like domain superfamily
Mapman id Description
17.1.2.1.6 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL7a
19.2.2.5.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.MUB conjugation.ubiquitin-fold protein (MUB)