Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p02430 Brassica napus
A05p21580 Brassica napus
A07p41000 Brassica napus
A09p20150 Brassica napus
A10p07100 Brassica napus
A10p07110 Brassica napus
Aa31LG4G5650 Aethionema arabicum
Aa31LG6G13210 Aethionema arabicum
Aa31LG9G13110 Aethionema arabicum
Aa31sc185G120 Aethionema arabicum
Aa31sc185G130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3737 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3744 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5573 Anthoceros agrestis
Actinidia15364 Actinidia chinensis
Actinidia19223 Actinidia chinensis
Actinidia22513 Actinidia chinensis
Actinidia26103 Actinidia chinensis
Actinidia29805 Actinidia chinensis
Actinidia37990 Actinidia chinensis
Ah.03g141280 Amaranthus hybridus
Ah.05g180890 Amaranthus hybridus
AL1G52680 Arabidopsis lyrata
AL1G52690 Arabidopsis lyrata
AL2G35400 Arabidopsis lyrata
AL7G14680 Arabidopsis lyrata
AL8G17780 Arabidopsis lyrata
Aqoxy131s001 Aquilegia oxysepala
Aqoxy6G01203 Aquilegia oxysepala
Aqoxy6G01204 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6RZF8I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B4ZPHH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F22IQH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R2LLHR Arachis hypogaea
AT1G45050 Arabidopsis thaliana
AT1G45110 Arabidopsis thaliana
AT1G75440 Arabidopsis thaliana
AT4G36410 Arabidopsis thaliana
AT5G42990 Arabidopsis thaliana
ATR0665G135 Amborella trichopoda
ATR0665G512 Amborella trichopoda
Atru.chr13.396 Acer truncatum
Atru.chr13.397 Acer truncatum
Atru.chr3.733 Acer truncatum
AUR62014470 Chenopodium quinoa
AUR62034528 Chenopodium quinoa
AUR62034529 Chenopodium quinoa
BcaB02g11436 Brassica carinata
BcaB07g31027 Brassica carinata
BcaB07g33894 Brassica carinata
BcaB07g33895 Brassica carinata
BcaC04g21952 Brassica carinata
BcaC05g27644 Brassica carinata
BcaC06g31733 Brassica carinata
BcaC07g37828 Brassica carinata
BcaC08g42893 Brassica carinata
BcaC08g47020 Brassica carinata
BcaC08g47351 Brassica carinata
BcaNung00734 Brassica carinata
BcaNung05306 Brassica carinata
BolC1t00251H Brassica oleracea
BolC5t32355H Brassica oleracea
BolC6t35251H Brassica oleracea
BolC6t35253H Brassica oleracea
BolC6t39980H Brassica oleracea
BolC7t46593H Brassica oleracea
BolC9t55455H Brassica oleracea
BraA01t00230Z Brassica rapa
BraA03t15493Z Brassica rapa
BraA05t21078Z Brassica rapa
BraA07t31638Z Brassica rapa
BraA09t37627Z Brassica rapa
BraA10t42958Z Brassica rapa
BraA10t42961Z Brassica rapa
C01p02630 Brassica napus
C05p36320 Brassica napus
C06p01140 Brassica napus
C06p01170 Brassica napus
C06p49440 Brassica napus
C09p25550 Brassica napus
CAN.G358.25 Capsicum annuum
CAN.G851.39 Capsicum annuum
CAN.G851.40 Capsicum annuum
CAN.G948.4 Capsicum annuum
CANSAT01G3256 Cannabis sativa
CANSAT35G0963 Cannabis sativa
CARHR036200 Cardamine hirsuta
CARHR036210 Cardamine hirsuta
CARHR068840 Cardamine hirsuta
CARHR174630 Cardamine hirsuta
CARHR181030 Cardamine hirsuta
CARHR244740 Cardamine hirsuta
CARHR293210 Cardamine hirsuta
Carub.0001s3551 Capsella rubella
Carub.0002s2232 Capsella rubella
Carub.0007s0390 Capsella rubella
Carub.0008s0576 Capsella rubella
Ca_02074_v3 Cicer arietinum L.
Ca_15490_v3 Cicer arietinum L.
Ca_29810_v3 Cicer arietinum L.
Cc07_g10130 Coffea canephora
Cc10_g02360 Coffea canephora
Cc10_g02390 Coffea canephora
CDE04G0425 Ceratophyllum demersum
CDE04G1582 Ceratophyllum demersum
CDE07G0667 Ceratophyllum demersum
Cfa022025 Carpinus fangiana
Ciclev10001571m.g Citrus clementina
Ciclev10002737m.g Citrus clementina
Ciclev10026664m.g Citrus clementina
CiPaw.07G053200 Carya illinoinensis
CiPaw.07G053300 Carya illinoinensis
CiPaw.07G156300 Carya illinoinensis
CiPaw.07G156400 Carya illinoinensis
ClCG07G008750 Citrullus lanatus
ClCG08G014710 Citrullus lanatus
COL.COLO4_26234 Corchorus olitorius
COL.COLO4_26235 Corchorus olitorius
Cpa.g.sc6.185 Carica papaya
Cpa.g.sc99.13 Carica papaya
Cre02.g141450 Chlamydomonas reinhardtii
Cre13.g572000 Chlamydomonas reinhardtii
CsaV3_2G029060 Cucumis sativus L.
CsaV3_4G005420 Cucumis sativus L.
CsaV3_5G008620 Cucumis sativus L.
CSS0001111 Camellia sinensis var. sinensis
CSS0002416 Camellia sinensis var. sinensis
CSS0005575 Camellia sinensis var. sinensis
CSS0011308 Camellia sinensis var. sinensis
CSS0016398 Camellia sinensis var. sinensis
CSS0017149 Camellia sinensis var. sinensis
CSS0019462 Camellia sinensis var. sinensis
CSS0020626 Camellia sinensis var. sinensis
CSS0021558 Camellia sinensis var. sinensis
CSS0021950 Camellia sinensis var. sinensis
CSS0029664 Camellia sinensis var. sinensis
CSS0031048 Camellia sinensis var. sinensis
CSS0046073 Camellia sinensis var. sinensis
CSS0046863 Camellia sinensis var. sinensis
CSS0048350 Camellia sinensis var. sinensis
DCAR_009961 Daucus carota
DCAR_013835 Daucus carota
DCAR_022453 Daucus carota
Dinv05202 Davidia involucrata
Dinv31791 Davidia involucrata
Dinv39461 Davidia involucrata
Dinv39462 Davidia involucrata
Dinv40034 Davidia involucrata
Duzib041G0293 Durio zibethinus
Duzib093G0172 Durio zibethinus
Duzib116G0526 Durio zibethinus
Duzib147G1373 Durio zibethinus
Duzib187G1572 Durio zibethinus
Duzib264G0034 Durio zibethinus
ECA232G0271 Erigeron canadensis
ECA232G3904 Erigeron canadensis
ECA238G4009 Erigeron canadensis
ECA247G3480 Erigeron canadensis
EL10Ac1g00601 Beta vulgaris
EL10Ac1g00602 Beta vulgaris
EL10Ac4g09149 Beta vulgaris
EL10As8g23881 Beta vulgaris
Eucgr.F01602 Eucalyptus grandis
Eucgr.I02390 Eucalyptus grandis
FAN15G0115 Fragaria x ananassa
FAN19G0749 Fragaria x ananassa
FAN20G2929 Fragaria x ananassa
FAN23G0522 Fragaria x ananassa
FAN26G0880 Fragaria x ananassa
FAN26G2971 Fragaria x ananassa
FAN27G1828 Fragaria x ananassa
FAN28G1770 Fragaria x ananassa
FvH4_1g12300 Fragaria vesca
FvH4_2g39240 Fragaria vesca
FvH4_2g39250 Fragaria vesca
Glyma.01G169700 Glycine max
Glyma.04G029000 Glycine max
Glyma.06G029000 Glycine max
Glyma.11G073600 Glycine max
Gohir.A01G114000 Gossypium hirsutum
Gohir.A02G168100 Gossypium hirsutum
Gohir.A05G190000 Gossypium hirsutum
Gohir.A06G007600 Gossypium hirsutum
Gohir.A12G062000 Gossypium hirsutum
Gohir.D01G102400 Gossypium hirsutum
Gohir.D03G011900 Gossypium hirsutum
Gohir.D05G193400 Gossypium hirsutum
Gohir.D06G002700 Gossypium hirsutum
Gohir.D12G061900 Gossypium hirsutum
Gorai.002G126400 Gossypium raimondii
Gorai.003G012200 Gossypium raimondii
Gorai.008G065100 Gossypium raimondii
Gorai.009G198400 Gossypium raimondii
Gorai.010G007600 Gossypium raimondii
GSVIVG01009782001 Vitis vinifera
GSVIVG01009784001 Vitis vinifera
GSVIVG01018860001 Vitis vinifera
HanXRQChr04g0099151 Helianthus annuus
HanXRQChr09g0261291 Helianthus annuus
HanXRQChr09g0269481 Helianthus annuus
HanXRQChr11g0325581 Helianthus annuus
HanXRQChr14g0441461 Helianthus annuus
Haze_03836 Corylus avellana
Haze_22561 Corylus avellana
Haze_26457 Corylus avellana
Hma1.2p1_0469F.1_g158860 Hydrangea macrophylla
Hma1.2p1_1114F.1_g258740 Hydrangea macrophylla
Hma1.2p1_1194F.1_g265710 Hydrangea macrophylla
Hma1.2p1_1194F.1_g265720 Hydrangea macrophylla
HPP92_000761 Vanilla planifolia
HPP92_000762 Vanilla planifolia
HPP92_001626 Vanilla planifolia
HPP92_001627 Vanilla planifolia
HPP92_017499 Vanilla planifolia
HPP92_024861 Vanilla planifolia
Hund14012 Selenicereus undatus
Hund16458 Selenicereus undatus
Hund17199 Selenicereus undatus
Hund26887 Selenicereus undatus
Lalb_Chr08g0245991 Lupinus albus
Lalb_Chr09g0322031 Lupinus albus
Lalb_Chr16g0377661 Lupinus albus
Lj1g0011689 Lotus japonicus
Lj2g0024242 Lotus japonicus
Lj4A33T81 Lonicera japonica
Lj4A33T82 Lonicera japonica
Lj4A33T83 Lonicera japonica
Lj4C210T8 Lonicera japonica
Lj4g0017029 Lotus japonicus
Lsat_1_v5_gn_1_17201 Lactuca sativa
Lsat_1_v5_gn_2_78101 Lactuca sativa
Lsat_1_v5_gn_4_116601 Lactuca sativa
Lsat_1_v5_gn_4_151381 Lactuca sativa
Manes.01G140800 Manihot esculenta
Manes.02G098800 Manihot esculenta
Manes.05G154300 Manihot esculenta
Manes.05G154600 Manihot esculenta
Manes.18G021412 Manihot esculenta
Mapoly0042s0010 Marchantia polymorpha
Mapoly0103s0047 Marchantia polymorpha
MBI04_g26282_MAGBIO Magnolia biondii
MBI11_g07616_MAGBIO Magnolia biondii
MCO14G527 Micromonas commoda
MD02G1138000 Malus domestica
MD08G1024000 Malus domestica
MD08G1024100 Malus domestica
MD15G1021600 Malus domestica
MD15G1021700 Malus domestica
MD15G1251800 Malus domestica
Medtr3g112310 Medicago truncatula
Medtr5g021260 Medicago truncatula
Medtr8g076490 Medicago truncatula
MELO3C010971.2 Cucumis melo
MELO3C016407.2 Cucumis melo
Migut.C00772 Erythranthe guttata
Migut.C00773 Erythranthe guttata
Migut.N03116 Erythranthe guttata
MSTRG.1246 Avicennia marina
MSTRG.1247 Avicennia marina
MSTRG.22316 Avicennia marina
MSTRG.25202 Avicennia marina
Nitab4.5_0000723g0090 Nicotiana tabacum
Nitab4.5_0001289g0070 Nicotiana tabacum
Nitab4.5_0001861g0100 Nicotiana tabacum
Nitab4.5_0001861g0110 Nicotiana tabacum
Nitab4.5_0002221g0030 Nicotiana tabacum
Nitab4.5_0004708g0090 Nicotiana tabacum
Nitab4.5_0005779g0030 Nicotiana tabacum
Nitab4.5_0005779g0070 Nicotiana tabacum
Nn1g05788 Nelumbo nucifera
Nn5g29720 Nelumbo nucifera
Nn5g29723 Nelumbo nucifera
Oeu007036.1 Olea europaea
Oeu012307.2 Olea europaea
Oeu046224.1 Olea europaea
Oeu047759.1 Olea europaea
Os03g0681400 Oryza sativa ssp. japonica
Os10g0414500 Oryza sativa ssp. japonica
Os12g0636800 Oryza sativa ssp. japonica
Peaxi162Scf00084g01017 Petunia axillaris
Peaxi162Scf00189g00917 Petunia axillaris
Peaxi162Scf00189g00920 Petunia axillaris
PGR031G1606 Punica granatum
PGR119G0953 Punica granatum
PGSC0003DMG400003613 Solanum tuberosum
PGSC0003DMG400003752 Solanum tuberosum
PGSC0003DMG400003753 Solanum tuberosum
Phvul.002G112300 Phaseolus vulgaris
Phvul.009G060300 Phaseolus vulgaris
Potri.002G030701 Populus trichocarpa
Potri.002G030800 Populus trichocarpa
Potri.005G118600 Populus trichocarpa
Potri.005G232100 Populus trichocarpa
Potri.005G232200 Populus trichocarpa
Potri.007G018700 Populus trichocarpa
Pp3c15_170 Physcomitrium patens
Pp3c17_2700 Physcomitrium patens
Pp3c23_9730 Physcomitrium patens
PRCOL_00005810 Prasinoderma coloniale
Prupe.1G373400 Prunus persica
Prupe.1G373500 Prunus persica
Prupe.7G162600 Prunus persica
Psat0s471g0160 Pisum sativum
Psat3g187600 Pisum sativum
Psat3g187640 Pisum sativum
Psat4g097040 Pisum sativum
Psat4g126360 Pisum sativum
Psat5g203400 Pisum sativum
PSO170G5087 Papaver somniferum
PSO210G4775 Papaver somniferum
PSO541G2666 Papaver somniferum
PSO541G4775 Papaver somniferum
PSO675G2702 Papaver somniferum
PSO675G8960 Papaver somniferum
QL02p010181 Quercus lobata
QL02p010184 Quercus lobata
QL02p010191 Quercus lobata
QL06p034867 Quercus lobata
QL10p007443 Quercus lobata
RcHm_v2.0_Chr2g0100121 Rosa chinensis
RcHm_v2.0_Chr6g0301761 Rosa chinensis
RcHm_v2.0_Chr6g0301771 Rosa chinensis
Rhsim06G0028400 Rhododendron simsii
Rhsim07G0243600 Rhododendron simsii
Rhsim07G0243700 Rhododendron simsii
Sabra02G0024500 Salix brachista
Sabra02G0024600 Salix brachista
Sabra05G0097700 Salix brachista
Sabra05G0179100 Salix brachista
Sabra07G0015800 Salix brachista
SalBow7G1285 Salvia bowleyana
SalBow8G1207 Salvia bowleyana
SalBow8G1622 Salvia bowleyana
SalBow8G1656 Salvia bowleyana
SalBow8G3728 Salvia bowleyana
Sc03g0003250 Simmondsia chinensis
Sc15g0007180 Simmondsia chinensis
Sc15g0007190 Simmondsia chinensis
Sed0003163 Sechium edule
Sed0006773 Sechium edule
Sed0011437 Sechium edule
Sed0025916 Sechium edule
SEGI_04036 Sequoiadendron giganteum
SEGI_08644 Sequoiadendron giganteum
SEGI_08976 Sequoiadendron giganteum
SEGI_12827 Sequoiadendron giganteum
SEGI_23158 Sequoiadendron giganteum
SEGI_25275 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05847 Striga asiatica
SGA_v2.0_scaffold162G37909 Striga asiatica
SGA_v2.0_scaffold326G48737 Striga asiatica
SMO137G0117 Selaginella moellendorffii
SMO147G0429 Selaginella moellendorffii
SMO169G0295 Selaginella moellendorffii
Solyc02g084760.3 Solanum lycopersicum
Solyc04g080800.4 Solanum lycopersicum
Solyc04g080810.4 Solanum lycopersicum
Sopen02g029430 Solanum pennellii
Sopen04g034390 Solanum pennellii
Sopen04g034400 Solanum pennellii
Sp1g33870 Schrenkiella parvula
Sp1g33880 Schrenkiella parvula
Sp2g07750 Schrenkiella parvula
Sp5g30590 Schrenkiella parvula
Sp7g34070 Schrenkiella parvula
TAR381G0609 Trochodendron aralioides
TAR625G0040 Trochodendron aralioides
TAR628G1547 Trochodendron aralioides
TAR628G1714 Trochodendron aralioides
THA.LOC104804248 Tarenaya hassleriana
THA.LOC104809296 Tarenaya hassleriana
THA.LOC104813319 Tarenaya hassleriana
THA.LOC104813814 Tarenaya hassleriana
THA.LOC104814151 Tarenaya hassleriana
THA.LOC104822837 Tarenaya hassleriana
Thecc.01G026700 Theobroma cacao
Thecc.08G034400 Theobroma cacao
Thecc.08G034500 Theobroma cacao
Thhalv10003273m.g Eutrema salsugineum
Thhalv10011622m.g Eutrema salsugineum
Thhalv10011837m.g Eutrema salsugineum
Thhalv10019254m.g Eutrema salsugineum
Thhalv10026441m.g Eutrema salsugineum
TPR.G12317 Trifolium pratense
TPR.G30997 Trifolium pratense
TPR.G33409 Trifolium pratense
TWI09G1479 Tripterygium wilfordii
TWI36G1643 Tripterygium wilfordii
TWI56G0852 Tripterygium wilfordii
TWI56G0875 Tripterygium wilfordii
TWI60G0854 Tripterygium wilfordii
TWI73G0288 Tripterygium wilfordii
unitig_578.g16081 Utricularia gibba
unitig_8.g3374 Utricularia gibba
vmacro04308 Vaccinium macrocarpon
vmacro07875 Vaccinium macrocarpon
vmacro17727 Vaccinium macrocarpon
vmacro21685 Vaccinium macrocarpon
VMungo1215G1174 Vigna mungo
VMungo1309G0203 Vigna mungo
Zm00001eb033000 Zea mays
Zm00001eb048090 Zea mays
Zm00001eb051860 Zea mays
Zm00001eb134110 Zea mays
Zm00001eb217340 Zea mays

User provided reference genes

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