Gene: AT1G45050
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G45050
- Transcript Identifier AT1G45050.1
- Gene Type Coding gene
- Location Chr1 : 17031337-17032967 : positive
Gene Family Information
- ID HOM05D001587
- #Genes/#Species 405/98
- Phylogenetic origin
- ID ORTHO05D002654
- #Genes/#Species 272/94
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G45050.1
- symbol ATUBC2-1
- uniprot P42743
Descriptions
- Description Ubiquitin-conjugating enzyme family protein
- Computational description ATUBC2-1; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 18 (TAIR:AT5G42990.1); Has 9046 Blast hits to 9044 proteins in 385 species: Archae - 0; Bacteria - 0; Metazoa - 3956; Fungi - 2002; Plants - 1701; Viruses - 20; Other Eukaryotes - 1367 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006511 | IDA TAS | Gene Ontology | ubiquitin-dependent protein catabolic process | 1 2 |
GO:0009910 | IGI | Gene Ontology | negative regulation of flower development | 3 |
GO:0009965 | IGI | Gene Ontology | leaf morphogenesis | 3 |
GO:0016567 | IEA | GOA Database | protein ubiquitination | |
GO:0016567 | IDA | Gene Ontology | protein ubiquitination | 4 |
GO:0043161 | IBA | Gene Ontology | proteasome-mediated ubiquitin-dependent protein catabolic process | 5 |
GO:0000209 | IBA | Gene Ontology | protein polyubiquitination | 5 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0004842 | IDA | Gene Ontology | ubiquitin-protein transferase activity | 2 |
GO:0061631 | IEA | GOA Database | ubiquitin conjugating enzyme activity | |
GO:0061631 | IBA | Gene Ontology | ubiquitin conjugating enzyme activity | 5 |
GO:0000166 | IEA | GOA Database | nucleotide binding | |
GO:0016740 | IEA | GOA Database | transferase activity | |
GO:0005524 | IEA | GOA Database | ATP binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISM, IBA | Gene Ontology | nucleus | 5 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
19.2.2.1.3 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-conjugating E2 protein (UBC) |