Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p33400 Brassica napus
A01p33420 Brassica napus
A02p41480 Brassica napus
A02p41490 Brassica napus
A03p46800 Brassica napus
A03p46820 Brassica napus
A03p46830 Brassica napus
A04p01060 Brassica napus
A08p16650 Brassica napus
A09p07250 Brassica napus
A09p41760 Brassica napus
A09p41770 Brassica napus
A09p52590 Brassica napus
A09p52620 Brassica napus
A09p54270 Brassica napus
Aa31LG10G16120 Aethionema arabicum
Aa31LG11G2160 Aethionema arabicum
Aa31LG11G2170 Aethionema arabicum
Aa31LG11G2180 Aethionema arabicum
Actinidia01663 Actinidia chinensis
Actinidia21350 Actinidia chinensis
Ah.11g045840 Amaranthus hybridus
Ah.14g086290 Amaranthus hybridus
AL1G11090 Arabidopsis lyrata
AL1G11960 Arabidopsis lyrata
AL1G16270 Arabidopsis lyrata
AL1G17090 Arabidopsis lyrata
AL1G45330 Arabidopsis lyrata
AL1G52920 Arabidopsis lyrata
AL1G58420 Arabidopsis lyrata
AL3G48630 Arabidopsis lyrata
AL5G10320 Arabidopsis lyrata
AL5G10340 Arabidopsis lyrata
AL5G20610 Arabidopsis lyrata
AL5G20620 Arabidopsis lyrata
AL5G21850 Arabidopsis lyrata
AL5G23770 Arabidopsis lyrata
AL5G25990 Arabidopsis lyrata
AL5G30030 Arabidopsis lyrata
AL5G30040 Arabidopsis lyrata
AL5G30800 Arabidopsis lyrata
AL5G35040 Arabidopsis lyrata
AL5G39230 Arabidopsis lyrata
AL5G39240 Arabidopsis lyrata
AL5G39260 Arabidopsis lyrata
AL5G41570 Arabidopsis lyrata
AL5G43300 Arabidopsis lyrata
AL5G44650 Arabidopsis lyrata
AL5G44950 Arabidopsis lyrata
AL7G21380 Arabidopsis lyrata
AL7G41420 Arabidopsis lyrata
AL7G51710 Arabidopsis lyrata
AL8G21440 Arabidopsis lyrata
AL8G26350 Arabidopsis lyrata
AL8G37830 Arabidopsis lyrata
AL8G37840 Arabidopsis lyrata
AL8G37850 Arabidopsis lyrata
AL8G40910 Arabidopsis lyrata
AL8G41190 Arabidopsis lyrata
AL8G41200 Arabidopsis lyrata
AL8G41820 Arabidopsis lyrata
AL8G43360 Arabidopsis lyrata
Aqoxy2G02522 Aquilegia oxysepala
Aqoxy5G02792 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.95CVAH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TIM68F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XUXX3P Arachis hypogaea
AT3G60940 Arabidopsis thaliana
AT3G61028 Arabidopsis thaliana
AT3G61090 Arabidopsis thaliana
AT3G62050 Arabidopsis thaliana
AT3G62200 Arabidopsis thaliana
AT3G62210 Arabidopsis thaliana
AT4G30760 Arabidopsis thaliana
AT5G35640 Arabidopsis thaliana
AT5G61180 Arabidopsis thaliana
AT5G61190 Arabidopsis thaliana
AT5G64590 Arabidopsis thaliana
ATR0796G271 Amborella trichopoda
Atru.chr5.890 Acer truncatum
Atru.chr5.891 Acer truncatum
Atru.chr5.892 Acer truncatum
AUR62002684 Chenopodium quinoa
AUR62011701 Chenopodium quinoa
AUR62024558 Chenopodium quinoa
AUR62030141 Chenopodium quinoa
BcaB03g11817 Brassica carinata
BcaB04g18184 Brassica carinata
BcaB04g19904 Brassica carinata
BcaB04g20587 Brassica carinata
BcaB07g32632 Brassica carinata
BcaC01g00880 Brassica carinata
BcaC01g00882 Brassica carinata
BcaC02g08726 Brassica carinata
BcaC02g09873 Brassica carinata
BcaC02g10275 Brassica carinata
BcaC03g13632 Brassica carinata
BcaC04g23460 Brassica carinata
BcaC05g26203 Brassica carinata
BcaC05g26324 Brassica carinata
BcaC06g33174 Brassica carinata
BcaC06g33175 Brassica carinata
BcaC06g33211 Brassica carinata
BcaC06g33212 Brassica carinata
BcaC06g33215 Brassica carinata
BcaC07g40424 Brassica carinata
BcaC07g40712 Brassica carinata
BcaC07g41874 Brassica carinata
BcaC08g46204 Brassica carinata
BcaC09g49085 Brassica carinata
BcaNung01309 Brassica carinata
BcaNung02251 Brassica carinata
BolC1t00009H Brassica oleracea
BolC1t04225H Brassica oleracea
BolC2t08502H Brassica oleracea
BolC2t12190H Brassica oleracea
BolC2t12194H Brassica oleracea
BolC3t20841H Brassica oleracea
BolC3t20845H Brassica oleracea
BolC4t24609H Brassica oleracea
BolC4t25235H Brassica oleracea
BolC4t26717H Brassica oleracea
BolC5t30907H Brassica oleracea
BolC5t31038H Brassica oleracea
BolC5t32995H Brassica oleracea
BolC6t39204H Brassica oleracea
BolC7t45008H Brassica oleracea
BolC7t45009H Brassica oleracea
BolC7t45010H Brassica oleracea
BolC7t45011H Brassica oleracea
BolC8t50466H Brassica oleracea
BolC8t51127H Brassica oleracea
BolC8t51292H Brassica oleracea
BolC8t52477H Brassica oleracea
BolC9t53724H Brassica oleracea
BraA01t03463Z Brassica rapa
BraA02t09089Z Brassica rapa
BraA02t09090Z Brassica rapa
BraA03t13802Z Brassica rapa
BraA04t15823Z Brassica rapa
BraA08t33630Z Brassica rapa
BraA09t36375Z Brassica rapa
BraA09t39665Z Brassica rapa
BraA09t39666Z Brassica rapa
BraA09t40689Z Brassica rapa
BraA09t40691Z Brassica rapa
BraA09t40839Z Brassica rapa
BraA09t42126Z Brassica rapa
C01p00030 Brassica napus
C01p42700 Brassica napus
C01p48440 Brassica napus
C02p61400 Brassica napus
C02p61420 Brassica napus
C03p85540 Brassica napus
C03p85570 Brassica napus
C04p30870 Brassica napus
C04p31280 Brassica napus
C04p51270 Brassica napus
C05p22110 Brassica napus
C05p22120 Brassica napus
C05p23360 Brassica napus
C05p42720 Brassica napus
C06p31460 Brassica napus
C06p42210 Brassica napus
C07p44850 Brassica napus
C07p44860 Brassica napus
C07p44870 Brassica napus
C07p44880 Brassica napus
C08p28610 Brassica napus
C08p35340 Brassica napus
C08p37150 Brassica napus
C08p49410 Brassica napus
C09p08100 Brassica napus
C09p08110 Brassica napus
CAN.G101.21 Capsicum annuum
CAN.G1248.22 Capsicum annuum
CAN.G408.4 Capsicum annuum
CAN.G497.101 Capsicum annuum
CAN.G497.102 Capsicum annuum
CAN.G85.11 Capsicum annuum
CANSAT25G0904 Cannabis sativa
CARHR000960 Cardamine hirsuta
CARHR005160 Cardamine hirsuta
CARHR043790 Cardamine hirsuta
CARHR070150 Cardamine hirsuta
CARHR113000 Cardamine hirsuta
CARHR119130 Cardamine hirsuta
CARHR150720 Cardamine hirsuta
CARHR159270 Cardamine hirsuta
CARHR159500 Cardamine hirsuta
CARHR166880 Cardamine hirsuta
CARHR167440 Cardamine hirsuta
CARHR167770 Cardamine hirsuta
CARHR172540 Cardamine hirsuta
CARHR172550 Cardamine hirsuta
CARHR172830 Cardamine hirsuta
CARHR179320 Cardamine hirsuta
CARHR216620 Cardamine hirsuta
CARHR265190 Cardamine hirsuta
CARHR265790 Cardamine hirsuta
CARHR274910 Cardamine hirsuta
CARHR274920 Cardamine hirsuta
CARHR274930 Cardamine hirsuta
CARHR274940 Cardamine hirsuta
CARHR274950 Cardamine hirsuta
CARHR288830 Cardamine hirsuta
Carub.0001s0130 Capsella rubella
Carub.0001s2926 Capsella rubella
Carub.0001s3469 Capsella rubella
Carub.0002s0630 Capsella rubella
Carub.0002s0842 Capsella rubella
Carub.0005s1718 Capsella rubella
Carub.0005s1719 Capsella rubella
Carub.0005s2878 Capsella rubella
Carub.0005s2893 Capsella rubella
Carub.0006s2385 Capsella rubella
Carub.0007s1646 Capsella rubella
Carub.0007s1746 Capsella rubella
Carub.0007s1939 Capsella rubella
Carub.0007s2792 Capsella rubella
Carub.0007s3604 Capsella rubella
Carub.0007s3606 Capsella rubella
Carub.0008s2185 Capsella rubella
Ca_09240_v3 Cicer arietinum L.
Ca_09277_v3 Cicer arietinum L.
Cc01_g21840 Coffea canephora
Cc02_g35790 Coffea canephora
CDE09G1275 Ceratophyllum demersum
Cfa004891 Carpinus fangiana
Ciclev10003599m.g Citrus clementina
Ciclev10019276m.g Citrus clementina
CiPaw.07G124200 Carya illinoinensis
CiPaw.08G083800 Carya illinoinensis
CiPaw.08G083900 Carya illinoinensis
ClCG01G007140 Citrullus lanatus
COL.COLO4_23147 Corchorus olitorius
Cpa.g.sc519.4 Carica papaya
CSS0013085 Camellia sinensis var. sinensis
CSS0023005 Camellia sinensis var. sinensis
DCAR_005725 Daucus carota
DCAR_012305 Daucus carota
DCAR_018246 Daucus carota
DCAR_025306 Daucus carota
Dinv12091 Davidia involucrata
Dinv24507 Davidia involucrata
Dinv24508 Davidia involucrata
Dinv30943 Davidia involucrata
Duzib138G0531 Durio zibethinus
Duzib211G0259 Durio zibethinus
ECA236G0747 Erigeron canadensis
EL10Ac8g19630 Beta vulgaris
EL10Ac9g20820 Beta vulgaris
EL10As5g23613 Beta vulgaris
Eucgr.H01318 Eucalyptus grandis
Eucgr.K00579 Eucalyptus grandis
FAN19G2030 Fragaria x ananassa
FAN26G2486 Fragaria x ananassa
FAN28G1216 Fragaria x ananassa
FvH4_1g26400 Fragaria vesca
Glyma.03G223251 Glycine max
Glyma.03G228500 Glycine max
Glyma.10G143900 Glycine max
Glyma.19G225800 Glycine max
Gohir.A11G103800 Gossypium hirsutum
Gohir.A12G120700 Gossypium hirsutum
Gohir.D11G108200 Gossypium hirsutum
Gohir.D12G124500 Gossypium hirsutum
Gorai.007G116200 Gossypium raimondii
Gorai.008G135500 Gossypium raimondii
GSVIVG01028213001 Vitis vinifera
GSVIVG01031320001 Vitis vinifera
HanXRQChr03g0088751 Helianthus annuus
HanXRQChr03g0088761 Helianthus annuus
HanXRQChr09g0270991 Helianthus annuus
Haze_05129 Corylus avellana
Hma1.2p1_0759F.1_g213950 Hydrangea macrophylla
Hma1.2p1_3304F.1_g335090 Hydrangea macrophylla
Hund11630 Selenicereus undatus
Lalb_Chr02g0147581 Lupinus albus
Lalb_Chr02g0147591 Lupinus albus
Lalb_Chr04g0260301 Lupinus albus
Lalb_Chr06g0167321 Lupinus albus
Lj1g0004173 Lotus japonicus
Lj1g0013696 Lotus japonicus
Lj1g0015890 Lotus japonicus
Lj5C319T15 Lonicera japonica
Lj9A230G20 Lonicera japonica
Lj9A230G21 Lonicera japonica
LjContig00049g0001734 Lotus japonicus
Lju99A5G39 Lonicera japonica
Lsat_1_v5_gn_9_77400 Lactuca sativa
Manes.01G233600 Manihot esculenta
Manes.08G107800 Manihot esculenta
Manes.09G180700 Manihot esculenta
Mapoly0025s0013 Marchantia polymorpha
MBI18_g09644_MAGBIO Magnolia biondii
MD09G1292400 Malus domestica
MD17G1283700 Malus domestica
Medtr1g023440 Medicago truncatula
Medtr1g023460 Medicago truncatula
Medtr3g050240 Medicago truncatula
Medtr7g108660 Medicago truncatula
Medtr7g110390 Medicago truncatula
Medtr7g111570 Medicago truncatula
MELO3C005198.2 Cucumis melo
Migut.D00022 Erythranthe guttata
Migut.K01357 Erythranthe guttata
Migut.N00970 Erythranthe guttata
MSTRG.16424 Avicennia marina
MSTRG.20358 Avicennia marina
Nitab4.5_0002485g0050 Nicotiana tabacum
Nitab4.5_0003841g0010 Nicotiana tabacum
Nitab4.5_0005904g0040 Nicotiana tabacum
Nitab4.5_0007320g0020 Nicotiana tabacum
Nn3g21907 Nelumbo nucifera
Nn3g21913 Nelumbo nucifera
Nn4g25391 Nelumbo nucifera
Oeu000099.1 Olea europaea
Oeu036643.2 Olea europaea
Oeu044758.1 Olea europaea
Os03g0370200 Oryza sativa ssp. japonica
Os07g0637200 Oryza sativa ssp. japonica
Peaxi162Scf00166g00428 Petunia axillaris
Peaxi162Scf00357g00114 Petunia axillaris
PGR031G1599 Punica granatum
PGR031G1658 Punica granatum
PGR031G2409 Punica granatum
PGR031G2483 Punica granatum
PGR031G3055 Punica granatum
PGR031G3460 Punica granatum
PGR142G0814 Punica granatum
PGSC0003DMG400001456 Solanum tuberosum
PGSC0003DMG400001457 Solanum tuberosum
PGSC0003DMG400001458 Solanum tuberosum
PGSC0003DMG400016308 Solanum tuberosum
PGSC0003DMG400018288 Solanum tuberosum
Phvul.001G217000 Phaseolus vulgaris
Phvul.001G222300 Phaseolus vulgaris
Potri.005G003800 Populus trichocarpa
Potri.013G003000 Populus trichocarpa
Potri.013G003100 Populus trichocarpa
Potri.013G003200 Populus trichocarpa
Potri.013G003301 Populus trichocarpa
Pp3c11_5100 Physcomitrium patens
Pp3c7_23110 Physcomitrium patens
Prupe.3G003800 Prunus persica
Psat3g014920 Pisum sativum
Psat3g018040 Pisum sativum
PSO170G0651 Papaver somniferum
PSO210G6614 Papaver somniferum
PSO357G0431 Papaver somniferum
PSO761G0515 Papaver somniferum
QL03p010255 Quercus lobata
QL03p010491 Quercus lobata
QL12p034495 Quercus lobata
RcHm_v2.0_Chr3g0486181 Rosa chinensis
Rhsim03G0201000 Rhododendron simsii
Rhsim05G0122100 Rhododendron simsii
RhsimUnG0163600 Rhododendron simsii
Sabra05G0001000 Salix brachista
Sabra05G0015100 Salix brachista
Sabra13G0002500 Salix brachista
Sabra13G0002600 Salix brachista
Sabra13G0002700 Salix brachista
Sabra13G0002800 Salix brachista
SalBow4G0536 Salvia bowleyana
SalBow4G1768 Salvia bowleyana
Sc05g0000120 Simmondsia chinensis
Sed0008463 Sechium edule
Sed0015340 Sechium edule
SEGI_10670 Sequoiadendron giganteum
SEGI_20177 Sequoiadendron giganteum
SEGI_20611 Sequoiadendron giganteum
SEGI_24410 Sequoiadendron giganteum
SEGI_28425 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02913 Striga asiatica
SGA_v2.0_scaffold80G25683 Striga asiatica
SHI18016 Sapria himalayana
SMO143G0012 Selaginella moellendorffii
SMO170G0012 Selaginella moellendorffii
SMO196G0203 Selaginella moellendorffii
SMO200G0216 Selaginella moellendorffii
SMO338G0014 Selaginella moellendorffii
Solyc01g101140.4 Solanum lycopersicum
Solyc02g088850.3 Solanum lycopersicum
Solyc02g088860.2 Solanum lycopersicum
Solyc02g088870.1 Solanum lycopersicum
Solyc02g088880.1 Solanum lycopersicum
Solyc02g088890.2 Solanum lycopersicum
Sopen01g044590 Solanum pennellii
Sopen02g033560 Solanum pennellii
Sopen02g033570 Solanum pennellii
Sp2g24420 Schrenkiella parvula
Sp2g24430 Schrenkiella parvula
Sp5g01180 Schrenkiella parvula
Sp5g20360 Schrenkiella parvula
Sp5g22790 Schrenkiella parvula
TAR362G0556 Trochodendron aralioides
TAR365G0439 Trochodendron aralioides
TAR365G0880 Trochodendron aralioides
TAR636G1258 Trochodendron aralioides
THA.LOC104801327 Tarenaya hassleriana
THA.LOC104802123 Tarenaya hassleriana
THA.LOC104817439 Tarenaya hassleriana
THA.LOC104818337 Tarenaya hassleriana
THA.LOC104818515 Tarenaya hassleriana
Thecc.01G323400 Theobroma cacao
Thhalv10002969m.g Eutrema salsugineum
Thhalv10003587m.g Eutrema salsugineum
Thhalv10003670m.g Eutrema salsugineum
Thhalv10005803m.g Eutrema salsugineum
Thhalv10006264m.g Eutrema salsugineum
Thhalv10009040m.g Eutrema salsugineum
Thhalv10012128m.g Eutrema salsugineum
Thhalv10015746m.g Eutrema salsugineum
Thhalv10017693m.g Eutrema salsugineum
Thhalv10017769m.g Eutrema salsugineum
Thhalv10019634m.g Eutrema salsugineum
Thhalv10019735m.g Eutrema salsugineum
Thhalv10022152m.g Eutrema salsugineum
Thhalv10027969m.g Eutrema salsugineum
TPR.G1642 Trifolium pratense
TPR.G8451 Trifolium pratense
TWI23G1113 Tripterygium wilfordii
TWI59G0324 Tripterygium wilfordii
vmacro02363 Vaccinium macrocarpon
vmacro19766 Vaccinium macrocarpon
vmacro19767 Vaccinium macrocarpon
VMungo0720G0252 Vigna mungo
VMungo1383G0246 Vigna mungo
Zm00001eb018010 Zea mays
Zm00001eb109990 Zea mays
Zm00001eb202460 Zea mays
Zm00001eb328720 Zea mays

User provided reference genes

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