Gene: AT5G61190

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G61190
  • Transcript Identifier AT5G61190.2
  • Gene Type Coding gene
  • Location Chr5 : 24615480-24618633 : positive

Gene Family Information

  • ID HOM05D001456
  • #Genes/#Species 434/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G61190.2
  • uniprot F4K209

Descriptions

  • Description putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain-containing protein
  • Computational description putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain; FUNCTIONS IN: zinc ion binding, nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, U1-type (InterPro:IPR003604), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT3G62200.1); Has 3024 Blast hits to 2428 proteins in 238 species: Archae - 10; Bacteria - 118; Metazoa - 1187; Fungi - 140; Plants - 554; Viruses - 10; Other Eukaryotes - 1005 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010468
IEA
Gene Ontologyregulation of gene expression
GO:0010468
IEA
InterProregulation of gene expression
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
Gene Ontologynucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004519
IEA
GOA Databaseendonuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005777
IEA
Gene Ontologyperoxisome
GO:0005777
IEA
InterProperoxisome
GO:0009507
IDA
GOA Databasechloroplast
GO:0009507
HDA
Gene Ontologychloroplast1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR021139 NYN domain, limkain-b1-type
IPR003604 Matrin/U1-C-like, C2H2-type zinc finger
IPR036236 Zinc finger C2H2 superfamily
IPR024768 Meiosis regulator and mRNA stability factor 1
IPR013087 Zinc finger C2H2-type
Mapman id Description
35.1 not assigned.annotated