Gene: AT5G61180

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G61180
  • Transcript Identifier AT5G61180.1
  • Gene Type Coding gene
  • Location Chr5 : 24612867-24614245 : positive

Gene Family Information

  • ID HOM05D001456
  • #Genes/#Species 434/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G61180.1
  • uniprot F4K208

Descriptions

  • Description Putative endonuclease or glycosyl hydrolase
  • Computational description Putative endonuclease or glycosyl hydrolase; BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT3G62200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010468
IEA
Gene Ontologyregulation of gene expression
GO:0010468
IEA
InterProregulation of gene expression
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
Gene Ontologynucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004519
IEA
GOA Databaseendonuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005777
IEA
Gene Ontologyperoxisome
GO:0005777
IEA
InterProperoxisome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036236 Zinc finger C2H2 superfamily
IPR021139 NYN domain, limkain-b1-type
IPR024768 Meiosis regulator and mRNA stability factor 1
IPR003604 Matrin/U1-C-like, C2H2-type zinc finger
Mapman id Description
35.1 not assigned.annotated