Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p15140 Brassica napus
A03p23140 Brassica napus
A03p23150 Brassica napus
A04p31400 Brassica napus
A10p32000 Brassica napus
Aa31LG1G21190 Aethionema arabicum
Aa31LG3G780 Aethionema arabicum
Aa31LG3G9620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1450 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3239 Anthoceros agrestis
Actinidia01816 Actinidia chinensis
Actinidia04783 Actinidia chinensis
Actinidia08638 Actinidia chinensis
Actinidia09260 Actinidia chinensis
Actinidia17946 Actinidia chinensis
Actinidia27706 Actinidia chinensis
Actinidia32305 Actinidia chinensis
Actinidia32306 Actinidia chinensis
Actinidia32307 Actinidia chinensis
Actinidia32308 Actinidia chinensis
Actinidia32309 Actinidia chinensis
Actinidia34209 Actinidia chinensis
Actinidia36913 Actinidia chinensis
Ah.04g150990 Amaranthus hybridus
Ah.07g205860 Amaranthus hybridus
Ah.13g076880 Amaranthus hybridus
AL4G39190 Arabidopsis lyrata
AL6G13760 Arabidopsis lyrata
AL6G25120 Arabidopsis lyrata
AL6G50800 Arabidopsis lyrata
AL8G28160 Arabidopsis lyrata
Aqoxy2G00387 Aquilegia oxysepala
Aqoxy5G04232 Aquilegia oxysepala
Aqoxy7G00099 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1I7GZ6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5X9BCK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A1ZC3A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HI2JIU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NBNL1F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PQA2H2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z6RGWR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZYZ79R Arachis hypogaea
AT2G41220 Arabidopsis thaliana
AT5G04140 Arabidopsis thaliana
AT5G53460 Arabidopsis thaliana
ATR0602G279 Amborella trichopoda
ATR0745G061 Amborella trichopoda
Atru.chr1.1446 Acer truncatum
Atru.chr1.150 Acer truncatum
AUR62006114 Chenopodium quinoa
AUR62018342 Chenopodium quinoa
AUR62019375 Chenopodium quinoa
AUR62029887 Chenopodium quinoa
AUR62030325 Chenopodium quinoa
BcaB01g03483 Brassica carinata
BcaB01g05770 Brassica carinata
BcaB02g10704 Brassica carinata
BcaC01g05353 Brassica carinata
BcaC01g06255 Brassica carinata
BcaC02g12842 Brassica carinata
BcaC02g12843 Brassica carinata
BcaC06g32116 Brassica carinata
BcaNung06514 Brassica carinata
BolC3t14177H Brassica oleracea
BolC3t15130H Brassica oleracea
BolC4t28386H Brassica oleracea
BolC9t60011H Brassica oleracea
BraA03t10809Z Brassica rapa
BraA03t11535Z Brassica rapa
BraA04t18598Z Brassica rapa
BraA10t45244Z Brassica rapa
C03p17640 Brassica napus
C03p27570 Brassica napus
C04p68830 Brassica napus
C09p72720 Brassica napus
CAN.G108.62 Capsicum annuum
CAN.G1342.3 Capsicum annuum
CAN.G303.50 Capsicum annuum
CAN.G348.16 Capsicum annuum
CAN.G396.17 Capsicum annuum
CAN.G7.6 Capsicum annuum
CAN.G85.1 Capsicum annuum
CAN.G85.2 Capsicum annuum
CAN.G85.3 Capsicum annuum
CANSAT21G0603 Cannabis sativa
CANSAT64G0825 Cannabis sativa
CARHR136310 Cardamine hirsuta
CARHR209130 Cardamine hirsuta
CARHR266580 Cardamine hirsuta
CARHR286540 Cardamine hirsuta
Carub.0004s2353 Capsella rubella
Carub.0006s0309 Capsella rubella
Carub.0008s1362 Capsella rubella
Ca_02229_v3 Cicer arietinum L.
Ca_07279_v3 Cicer arietinum L.
Ca_08395_v3 Cicer arietinum L.
Ca_12725_v3 Cicer arietinum L.
Ca_28881_v3 Cicer arietinum L.
CBR_g18711 Chara braunii
CBR_g18717 Chara braunii
CBR_g18718 Chara braunii
CBR_g31844 Chara braunii
CBR_g38420 Chara braunii
Cc02_g01700 Coffea canephora
Cc06_g19130 Coffea canephora
CDE02G2166 Ceratophyllum demersum
CDE08G0285 Ceratophyllum demersum
CDE08G0310 Ceratophyllum demersum
CDE08G0490 Ceratophyllum demersum
CDE08G1206 Ceratophyllum demersum
CDE09G0762 Ceratophyllum demersum
CDE09G0845 Ceratophyllum demersum
CDE09G0905 Ceratophyllum demersum
CDE09G1181 Ceratophyllum demersum
CDE10G1071 Ceratophyllum demersum
CDE10G1303 Ceratophyllum demersum
Cfa005594 Carpinus fangiana
Cfa020008 Carpinus fangiana
Ciclev10004120m.g Citrus clementina
Ciclev10004137m.g Citrus clementina
CiPaw.05G252100 Carya illinoinensis
CiPaw.06G009900 Carya illinoinensis
CiPaw.09G047200 Carya illinoinensis
CiPaw.10G039900 Carya illinoinensis
ClCG05G008840 Citrullus lanatus
ClCG10G016190 Citrullus lanatus
COL.COLO4_02568 Corchorus olitorius
COL.COLO4_03428 Corchorus olitorius
COL.COLO4_36597 Corchorus olitorius
COL.COLO4_36598 Corchorus olitorius
Cpa.g.sc3.65 Carica papaya
Cpa.g.sc5.173 Carica papaya
Cre12.g514050 Chlamydomonas reinhardtii
Cre13.g592200 Chlamydomonas reinhardtii
CsaV3_3G027930 Cucumis sativus L.
CsaV3_3G040230 Cucumis sativus L.
CSS0007758 Camellia sinensis var. sinensis
CSS0013560 Camellia sinensis var. sinensis
CSS0022197 Camellia sinensis var. sinensis
CSS0039913 Camellia sinensis var. sinensis
CSS0044676 Camellia sinensis var. sinensis
CSS0050330 Camellia sinensis var. sinensis
DCAR_008916 Daucus carota
DCAR_020316 Daucus carota
DCAR_020564 Daucus carota
DCAR_020565 Daucus carota
Dinv09721 Davidia involucrata
Dinv29294 Davidia involucrata
Dinv35322 Davidia involucrata
Duzib068G1332 Durio zibethinus
Duzib084G0325 Durio zibethinus
Duzib093G1354 Durio zibethinus
Duzib128G0892 Durio zibethinus
Duzib205G1094 Durio zibethinus
ECA232G2377 Erigeron canadensis
ECA248G1696 Erigeron canadensis
EL10Ac3g05303 Beta vulgaris
EL10Ac3g07231 Beta vulgaris
Eucgr.A01471 Eucalyptus grandis
Eucgr.A02249 Eucalyptus grandis
Eucgr.C00098 Eucalyptus grandis
Eucgr.L03008 Eucalyptus grandis
FAN01G1716 Fragaria x ananassa
FAN02G2678 Fragaria x ananassa
FAN03G1831 Fragaria x ananassa
FAN05G2108 Fragaria x ananassa
FAN06G0504 Fragaria x ananassa
FAN06G0708 Fragaria x ananassa
FAN09G1016 Fragaria x ananassa
FAN09G4168 Fragaria x ananassa
FAN10G1144 Fragaria x ananassa
FAN10G3586 Fragaria x ananassa
FAN13G2215 Fragaria x ananassa
FAN16G1024 Fragaria x ananassa
FAN16G2131 Fragaria x ananassa
FAN16G3657 Fragaria x ananassa
FvH4_6g25460 Fragaria vesca
FvH4_7g31770 Fragaria vesca
Glyma.03G128300 Glycine max
Glyma.04G236900 Glycine max
Glyma.06G127400 Glycine max
Glyma.08G269200 Glycine max
Glyma.14G162300 Glycine max
Glyma.19G065600 Glycine max
Glyma.19G130800 Glycine max
Gohir.A01G193200 Gossypium hirsutum
Gohir.A05G414000 Gossypium hirsutum
Gohir.A08G095962 Gossypium hirsutum
Gohir.A11G279050 Gossypium hirsutum
Gohir.A12G250700 Gossypium hirsutum
Gohir.D01G183500 Gossypium hirsutum
Gohir.D12G251500 Gossypium hirsutum
Gorai.002G226600 Gossypium raimondii
Gorai.008G269600 Gossypium raimondii
GSVIVG01019279001 Vitis vinifera
GSVIVG01028018001 Vitis vinifera
GSVIVG01029723001 Vitis vinifera
GSVIVG01033621001 Vitis vinifera
GSVIVG01038714001 Vitis vinifera
HanXRQChr01g0004731 Helianthus annuus
HanXRQChr03g0061571 Helianthus annuus
HanXRQChr09g0253001 Helianthus annuus
HanXRQChr15g0493171 Helianthus annuus
Haze_00186 Corylus avellana
Haze_18352 Corylus avellana
Haze_20222 Corylus avellana
Haze_26266 Corylus avellana
Haze_27566 Corylus avellana
Hma1.2p1_0538F.1_g174380 Hydrangea macrophylla
HPP92_006726 Vanilla planifolia
HPP92_006727 Vanilla planifolia
HPP92_006728 Vanilla planifolia
HPP92_008165 Vanilla planifolia
Hund04854 Selenicereus undatus
Hund11674 Selenicereus undatus
Hund19100 Selenicereus undatus
Hund24590 Selenicereus undatus
Hund24592 Selenicereus undatus
Lalb_Chr08g0240351 Lupinus albus
Lalb_Chr11g0066781 Lupinus albus
Lalb_Chr22g0357391 Lupinus albus
Lj1A1014G37 Lonicera japonica
Lj1A1014T43 Lonicera japonica
Lj1A1093G56 Lonicera japonica
Lj1g0005026 Lotus japonicus
Lj1g0027622 Lotus japonicus
Lj3C907T3 Lonicera japonica
Lsat_1_v5_gn_1_119380 Lactuca sativa
Lsat_1_v5_gn_1_41240 Lactuca sativa
Lsat_1_v5_gn_3_90861 Lactuca sativa
Lsat_1_v5_gn_4_181040 Lactuca sativa
Lsat_1_v5_gn_5_158001 Lactuca sativa
Lsat_1_v5_gn_8_69900 Lactuca sativa
Lsat_1_v5_gn_9_25520 Lactuca sativa
Lsat_1_v5_gn_9_58201 Lactuca sativa
Lsat_1_v5_gn_9_93500 Lactuca sativa
Manes.06G159400 Manihot esculenta
Manes.09G005600 Manihot esculenta
Manes.14G006836 Manihot esculenta
Mapoly0002s0330 Marchantia polymorpha
Mapoly0023s0027 Marchantia polymorpha
MBI04_g11122_MAGBIO Magnolia biondii
MBI04_g13670_MAGBIO Magnolia biondii
MBI04_g22056_MAGBIO Magnolia biondii
MBI06_g08464_MAGBIO Magnolia biondii
MBI06_g14036_MAGBIO Magnolia biondii
MBI06_g14037_MAGBIO Magnolia biondii
MBI07_g07096_MAGBIO Magnolia biondii
MBI10_g16746_MAGBIO Magnolia biondii
MBI10_g39521_MAGBIO Magnolia biondii
MBI11_g13552_MAGBIO Magnolia biondii
MBI11_g24188_MAGBIO Magnolia biondii
MBI11_g28740_MAGBIO Magnolia biondii
MBI11_g29950_MAGBIO Magnolia biondii
MBI11_g42958_MAGBIO Magnolia biondii
MBI12_g21443_MAGBIO Magnolia biondii
MBI13_g34980_MAGBIO Magnolia biondii
MBI13_g34981_MAGBIO Magnolia biondii
MBI13_g37966_MAGBIO Magnolia biondii
MBI13_g44213_MAGBIO Magnolia biondii
MBI14_g13642_MAGBIO Magnolia biondii
MBI15_g29734_MAGBIO Magnolia biondii
MBI15_g31580_MAGBIO Magnolia biondii
MBI17_g25958_MAGBIO Magnolia biondii
MBI18_g11221_MAGBIO Magnolia biondii
MBI18_g14130_MAGBIO Magnolia biondii
MBI18_g18667_MAGBIO Magnolia biondii
MBI18_g42654_MAGBIO Magnolia biondii
MBI19_g33778_MAGBIO Magnolia biondii
MBI19_g37427_MAGBIO Magnolia biondii
MBI19_g44039_MAGBIO Magnolia biondii
MCO07G759 Micromonas commoda
MCO12G340 Micromonas commoda
MD01G1219500 Malus domestica
MD07G1290500 Malus domestica
MD14G1087500 Malus domestica
Medtr1g027020 Medicago truncatula
Medtr7g089970 Medicago truncatula
MELO3C008481.2 Cucumis melo
MELO3C009759.2 Cucumis melo
Migut.F00228 Erythranthe guttata
Migut.J01662 Erythranthe guttata
MSTRG.19811 Avicennia marina
Nitab4.5_0000415g0090 Nicotiana tabacum
Nitab4.5_0000714g0070 Nicotiana tabacum
Nitab4.5_0000714g0080 Nicotiana tabacum
Nitab4.5_0002492g0040 Nicotiana tabacum
Nitab4.5_0002936g0040 Nicotiana tabacum
Nn1g01871 Nelumbo nucifera
Nn1g04256 Nelumbo nucifera
Nn1g04257 Nelumbo nucifera
Nn1g05906 Nelumbo nucifera
Nn1g09047 Nelumbo nucifera
Nn3g19010 Nelumbo nucifera
Nn7g36729 Nelumbo nucifera
Nn8g40720 Nelumbo nucifera
Oeu003178.1 Olea europaea
Oeu021501.1 Olea europaea
Oeu022964.1 Olea europaea
Oeu041044.1 Olea europaea
Oeu041320.1 Olea europaea
Oeu041327.1 Olea europaea
Oeu045857.1 Olea europaea
Oeu057791.1 Olea europaea
Oeu063779.1 Olea europaea
Os01g0681900 Oryza sativa ssp. japonica
Os05g0555600 Oryza sativa ssp. japonica
Os07g0658400 Oryza sativa ssp. japonica
Peaxi162Scf00076g00532 Petunia axillaris
Peaxi162Scf00550g00052 Petunia axillaris
PGR031G1148 Punica granatum
PGR042G1482 Punica granatum
PGSC0003DMG400009698 Solanum tuberosum
Phvul.001G076400 Phaseolus vulgaris
Phvul.001G123900 Phaseolus vulgaris
Phvul.009G053900 Phaseolus vulgaris
Potri.006G038400 Populus trichocarpa
Potri.012G011700 Populus trichocarpa
Potri.015G017500 Populus trichocarpa
Potri.016G036900 Populus trichocarpa
Pp3c10_8200 Physcomitrium patens
Pp3c11_14840 Physcomitrium patens
Pp3c14_5770 Physcomitrium patens
Pp3c14_8740 Physcomitrium patens
Pp3c16_19110 Physcomitrium patens
Pp3c17_8320 Physcomitrium patens
Pp3c23_11400 Physcomitrium patens
Pp3c5_20080 Physcomitrium patens
Pp3c7_6520 Physcomitrium patens
Pp3c8_17940 Physcomitrium patens
Prupe.2G311700 Prunus persica
Prupe.7G039100 Prunus persica
Psat3g078160 Pisum sativum
Psat6g037200 Pisum sativum
PSO063G5383 Papaver somniferum
PSO170G0996 Papaver somniferum
PSO339G5940 Papaver somniferum
PSO384G1328 Papaver somniferum
QL07p010117 Quercus lobata
QL09p009601 Quercus lobata
QL09p009608 Quercus lobata
RcHm_v2.0_Chr1g0381001 Rosa chinensis
RcHm_v2.0_Chr2g0125471 Rosa chinensis
Rhsim02G0157800 Rhododendron simsii
Rhsim03G0040000 Rhododendron simsii
Rhsim03G0101600 Rhododendron simsii
Rhsim03G0207200 Rhododendron simsii
Rhsim03G0207700 Rhododendron simsii
Rhsim09G0205100 Rhododendron simsii
Sabra06G0025800 Salix brachista
Sabra12G0018500 Salix brachista
Sabra15G0013400 Salix brachista
Sabra16G0039100 Salix brachista
SalBow1G1285 Salvia bowleyana
SalBow4G0367 Salvia bowleyana
SalBow4G2448 Salvia bowleyana
SalBow6G4365 Salvia bowleyana
Sc13g0001150 Simmondsia chinensis
Sc13g0001160 Simmondsia chinensis
Sc13g0001170 Simmondsia chinensis
Sc13g0009760 Simmondsia chinensis
Sed0001320 Sechium edule
Sed0006803 Sechium edule
Sed0021586 Sechium edule
SEGI_03640 Sequoiadendron giganteum
SEGI_15444 Sequoiadendron giganteum
SEGI_16155 Sequoiadendron giganteum
SEGI_17472 Sequoiadendron giganteum
SEGI_19961 Sequoiadendron giganteum
SEGI_20014 Sequoiadendron giganteum
SEGI_31355 Sequoiadendron giganteum
SEGI_31493 Sequoiadendron giganteum
SEGI_32144 Sequoiadendron giganteum
SEGI_33224 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30296 Striga asiatica
SGA_v2.0_scaffold110G31323 Striga asiatica
SGA_v2.0_scaffold192G40562 Striga asiatica
SGA_v2.0_scaffold237G43833 Striga asiatica
SGA_v2.0_scaffold279G46778 Striga asiatica
SHI02382 Sapria himalayana
SMO232G0104 Selaginella moellendorffii
SMO239G0027 Selaginella moellendorffii
SMO266G0081 Selaginella moellendorffii
SMO297G0017 Selaginella moellendorffii
SMO297G0033 Selaginella moellendorffii
SMO302G0002 Selaginella moellendorffii
SMO302G0048 Selaginella moellendorffii
SMO353G0329 Selaginella moellendorffii
SMO353G0396 Selaginella moellendorffii
Solyc03g063560.3 Solanum lycopersicum
Solyc03g083440.4 Solanum lycopersicum
Solyc08g044270.4 Solanum lycopersicum
Sopen01g005570 Solanum pennellii
Sopen03g016230 Solanum pennellii
Sopen03g023210 Solanum pennellii
Sp4g23520 Schrenkiella parvula
Sp6g15593 Schrenkiella parvula
Sp6g38610 Schrenkiella parvula
TAR375G0916 Trochodendron aralioides
TAR375G0942 Trochodendron aralioides
TAR629G0032 Trochodendron aralioides
TAR636G2034 Trochodendron aralioides
THA.LOC104811925 Tarenaya hassleriana
THA.LOC104816414 Tarenaya hassleriana
Thecc.03G195800 Theobroma cacao
Thecc.05G135300 Theobroma cacao
Thhalv10012414m.g Eutrema salsugineum
Thhalv10012425m.g Eutrema salsugineum
Thhalv10016134m.g Eutrema salsugineum
TPR.G20023 Trifolium pratense
TPR.G22106 Trifolium pratense
TPR.G30627 Trifolium pratense
TPR.G35087 Trifolium pratense
TWI14G0941 Tripterygium wilfordii
TWI23G0733 Tripterygium wilfordii
TWI74G1565 Tripterygium wilfordii
TWI77G0540 Tripterygium wilfordii
unitig_37.g12790 Utricularia gibba
unitig_748.g8525 Utricularia gibba
unitig_748.g8526 Utricularia gibba
vmacro06543 Vaccinium macrocarpon
vmacro06546 Vaccinium macrocarpon
vmacro07800 Vaccinium macrocarpon
vmacro10115 Vaccinium macrocarpon
VMungo0647G1305 Vigna mungo
VMungo1309G1831 Vigna mungo
VMungo1383G1431 Vigna mungo
VMungo1383G1842 Vigna mungo
Zm00001eb021930 Zea mays
Zm00001eb156610 Zea mays
Zm00001eb166270 Zea mays
Zm00001eb179950 Zea mays
Zm00001eb279170 Zea mays
Zm00001eb295210 Zea mays
Zm00001eb295220 Zea mays
Zm00001eb329710 Zea mays
Zm00001eb329810 Zea mays
Zm00001eb329820 Zea mays
Zm00001eb360480 Zea mays

User provided reference genes

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