Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p33980 Brassica napus
A05p05660 Brassica napus
A06p39440 Brassica napus
A07p25310 Brassica napus
A09p04300 Brassica napus
A09p53160 Brassica napus
Aa31LG10G15190 Aethionema arabicum
Aa31LG11G7400 Aethionema arabicum
Aa31LG3G14230 Aethionema arabicum
Aa31LG3G14240 Aethionema arabicum
Aa31LG3G14660 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1995 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1998 Anthoceros agrestis
Actinidia21547 Actinidia chinensis
Ah.10g038790 Amaranthus hybridus
Ah.10g038800 Amaranthus hybridus
AL4G44890 Arabidopsis lyrata
AL5G43330 Arabidopsis lyrata
AL5G43340 Arabidopsis lyrata
AL8G20040 Arabidopsis lyrata
Aqoxy1G00280 Aquilegia oxysepala
Aqoxy3G01287 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1C19KZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BH8J5B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C4Q3NJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G3L9EH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N199JY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RM2YS3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S6CP9J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VWB10K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZUV7WX Arachis hypogaea
AT2G45710 Arabidopsis thaliana
AT3G61110 Arabidopsis thaliana
AT3G61111 Arabidopsis thaliana
AT5G47930 Arabidopsis thaliana
AT5G47940 Arabidopsis thaliana
ATR0332G069 Amborella trichopoda
ATR0824G178 Amborella trichopoda
Atru.chr11.2612 Acer truncatum
Atru.chr6.2714 Acer truncatum
AUR62007034 Chenopodium quinoa
AUR62009391 Chenopodium quinoa
AUR62019898 Chenopodium quinoa
AUR62023073 Chenopodium quinoa
AUR62037800 Chenopodium quinoa
BcaB02g07389 Brassica carinata
BcaB06g29429 Brassica carinata
BcaB07g29999 Brassica carinata
BcaC01g05110 Brassica carinata
BcaC03g17622 Brassica carinata
BcaC04g23798 Brassica carinata
BcaC06g30834 Brassica carinata
BcaC07g40613 Brassica carinata
BcaC07g42653 Brassica carinata
BcaC08g45099 Brassica carinata
BcaC08g45102 Brassica carinata
BolC2t11678H Brassica oleracea
BolC3t15372H Brassica oleracea
BolC4t22284H Brassica oleracea
BolC6t37879H Brassica oleracea
BolC6t37883H Brassica oleracea
BolC6t37884H Brassica oleracea
BolC7t44402H Brassica oleracea
BolC8t51176H Brassica oleracea
BolC9t53385H Brassica oleracea
BraA02t08706Z Brassica rapa
BraA03t11738Z Brassica rapa
BraA04t18859Z Brassica rapa
BraA06t26859Z Brassica rapa
BraA07t30174Z Brassica rapa
BraA09t36067Z Brassica rapa
BraA09t40742Z Brassica rapa
C02p56230 Brassica napus
C02p58440 Brassica napus
C04p06620 Brassica napus
C04p71780 Brassica napus
C06p27070 Brassica napus
C06p27110 Brassica napus
C07p38830 Brassica napus
C08p35880 Brassica napus
C08p35930 Brassica napus
C09p04570 Brassica napus
CAN.G1513.5 Capsicum annuum
CAN.G624.5 Capsicum annuum
CANSAT56G0661 Cannabis sativa
CANSAT56G1190 Cannabis sativa
CANSAT56G1835 Cannabis sativa
CANSAT56G2834 Cannabis sativa
CANSAT80G1121 Cannabis sativa
CARHR140950 Cardamine hirsuta
CARHR171400 Cardamine hirsuta
CARHR184320 Cardamine hirsuta
CARHR184330 Cardamine hirsuta
Carub.0004s2837 Capsella rubella
Carub.0005s2775 Capsella rubella
Carub.0008s0749 Capsella rubella
Carub.0011s0010 Capsella rubella
Carub.0011s0011 Capsella rubella
Ca_00423_v3 Cicer arietinum L.
Ca_19581_v3 Cicer arietinum L.
Ca_20942_v3 Cicer arietinum L.
Ca_25661_v3 Cicer arietinum L.
Ca_30298_v3 Cicer arietinum L.
CBR_g40843 Chara braunii
Cc00_g04030 Coffea canephora
Cc02_g28120 Coffea canephora
Cc11_g14900 Coffea canephora
CDE02G0642 Ceratophyllum demersum
CDE05G0268 Ceratophyllum demersum
CDE05G2003 Ceratophyllum demersum
CDE05G2132 Ceratophyllum demersum
CDE06G0493 Ceratophyllum demersum
Cfa007155 Carpinus fangiana
Cfa010777 Carpinus fangiana
Ciclev10017332m.g Citrus clementina
Ciclev10017335m.g Citrus clementina
Ciclev10017430m.g Citrus clementina
Ciclev10017799m.g Citrus clementina
Ciclev10030722m.g Citrus clementina
CiPaw.05G099900 Carya illinoinensis
CiPaw.14G000700 Carya illinoinensis
ClCG01G007900 Citrullus lanatus
ClCG06G001690 Citrullus lanatus
ClCG09G004070 Citrullus lanatus
COL.COLO4_04862 Corchorus olitorius
COL.COLO4_10472 Corchorus olitorius
COL.COLO4_13393 Corchorus olitorius
COL.COLO4_21844 Corchorus olitorius
Cpa.g.sc125.11 Carica papaya
Cpa.g.sc70.49 Carica papaya
Cpa.g.sc70.87 Carica papaya
Cre02.g145250 Chlamydomonas reinhardtii
Cre12.g529400 Chlamydomonas reinhardtii
CsaV3_5G025010 Cucumis sativus L.
CsaV3_6G007700 Cucumis sativus L.
CsaV3_7G030970 Cucumis sativus L.
CSS0004092 Camellia sinensis var. sinensis
CSS0035450 Camellia sinensis var. sinensis
CSS0038724 Camellia sinensis var. sinensis
DCAR_003251 Daucus carota
DCAR_005493 Daucus carota
DCAR_014461 Daucus carota
DCAR_022338 Daucus carota
DCAR_029678 Daucus carota
Dinv03900 Davidia involucrata
Dinv09348 Davidia involucrata
Dinv26264 Davidia involucrata
Dinv33268 Davidia involucrata
Dinv43433 Davidia involucrata
Dinv43434 Davidia involucrata
Dinv43435 Davidia involucrata
Duzib106G1543 Durio zibethinus
Duzib128G2012 Durio zibethinus
Duzib133G0545 Durio zibethinus
Duzib138G0028 Durio zibethinus
Duzib138G1268 Durio zibethinus
Duzib138G1437 Durio zibethinus
Duzib177G0585 Durio zibethinus
Duzib187G0372 Durio zibethinus
ECA233G0832 Erigeron canadensis
ECA234G3133 Erigeron canadensis
ECA248G1228 Erigeron canadensis
EL10Ac2g04339 Beta vulgaris
EL10Ac6g13890 Beta vulgaris
EL10As2g23278 Beta vulgaris
Eucgr.E03676 Eucalyptus grandis
Eucgr.J01280 Eucalyptus grandis
Eucgr.J01288 Eucalyptus grandis
FAN01G2686 Fragaria x ananassa
FAN03G1765 Fragaria x ananassa
FAN03G3510 Fragaria x ananassa
FAN06G3336 Fragaria x ananassa
FAN07G1509 Fragaria x ananassa
FAN07G1857 Fragaria x ananassa
FAN10G3273 Fragaria x ananassa
FAN12G0601 Fragaria x ananassa
FAN12G2525 Fragaria x ananassa
FAN19G1529 Fragaria x ananassa
FAN23G1213 Fragaria x ananassa
FvH4_1g27030 Fragaria vesca
FvH4_4g22340 Fragaria vesca
FvH4_4g22990 Fragaria vesca
FvH4_5g06191 Fragaria vesca
FvH4_7g01170 Fragaria vesca
Glyma.02G067300 Glycine max
Glyma.02G067400 Glycine max
Glyma.09G228900 Glycine max
Glyma.12G007700 Glycine max
Glyma.16G046500 Glycine max
Glyma.16G148500 Glycine max
Glyma.19G105700 Glycine max
Gohir.A07G083800 Gossypium hirsutum
Gohir.A07G165000 Gossypium hirsutum
Gohir.A08G050500 Gossypium hirsutum
Gohir.A08G143900 Gossypium hirsutum
Gohir.A08G209900 Gossypium hirsutum
Gohir.A11G265700 Gossypium hirsutum
Gohir.A13G173900 Gossypium hirsutum
Gohir.D03G054450 Gossypium hirsutum
Gohir.D07G089900 Gossypium hirsutum
Gohir.D07G177100 Gossypium hirsutum
Gohir.D08G060300 Gossypium hirsutum
Gohir.D08G164900 Gossypium hirsutum
Gohir.D08G226800 Gossypium hirsutum
Gohir.D10G094250 Gossypium hirsutum
Gohir.D11G275800 Gossypium hirsutum
Gohir.D13G179600 Gossypium hirsutum
Gorai.001G096100 Gossypium raimondii
Gorai.001G197900 Gossypium raimondii
Gorai.003G057100 Gossypium raimondii
Gorai.004G062400 Gossypium raimondii
Gorai.004G171900 Gossypium raimondii
Gorai.004G240700 Gossypium raimondii
Gorai.007G298000 Gossypium raimondii
Gorai.011G103600 Gossypium raimondii
Gorai.013G205000 Gossypium raimondii
GSVIVG01001113001 Vitis vinifera
GSVIVG01032121001 Vitis vinifera
GSVIVG01032964001 Vitis vinifera
HanXRQChr06g0175431 Helianthus annuus
HanXRQChr08g0210461 Helianthus annuus
HanXRQChr09g0251311 Helianthus annuus
HanXRQChr12g0362521 Helianthus annuus
HanXRQChr17g0540551 Helianthus annuus
Haze_12516 Corylus avellana
Haze_14965 Corylus avellana
Haze_19867 Corylus avellana
Haze_27114 Corylus avellana
Hma1.2p1_0152F.1_g067780 Hydrangea macrophylla
Hma1.2p1_0738F.1_g210830 Hydrangea macrophylla
HPP92_015712 Vanilla planifolia
HPP92_020114 Vanilla planifolia
HPP92_021610 Vanilla planifolia
HPP92_026649 Vanilla planifolia
Hund15256 Selenicereus undatus
Hund21482 Selenicereus undatus
Hund22193 Selenicereus undatus
Lalb_Chr02g0156881 Lupinus albus
Lalb_Chr04g0252381 Lupinus albus
Lalb_Chr10g0103231 Lupinus albus
Lalb_Chr14g0363611 Lupinus albus
Lalb_Chr17g0344961 Lupinus albus
Lalb_Chr19g0140311 Lupinus albus
Lalb_Chr21g0316941 Lupinus albus
Lj1g0027586 Lotus japonicus
Lj3g0000057 Lotus japonicus
Lj5g0001186 Lotus japonicus
Lj9A633T62 Lonicera japonica
Lsat_1_v5_gn_1_106561 Lactuca sativa
Lsat_1_v5_gn_1_44501 Lactuca sativa
Lsat_1_v5_gn_3_33000 Lactuca sativa
Lsat_1_v5_gn_4_96541 Lactuca sativa
Lsat_1_v5_gn_5_190500 Lactuca sativa
Lsat_1_v5_gn_5_6460 Lactuca sativa
Lsat_1_v5_gn_7_94561 Lactuca sativa
Lsat_1_v5_gn_8_83181 Lactuca sativa
Manes.06G017200 Manihot esculenta
Manes.08G100000 Manihot esculenta
Manes.09G173400 Manihot esculenta
Manes.10G141000 Manihot esculenta
Mapoly0095s0009 Marchantia polymorpha
MBI04_g36081_MAGBIO Magnolia biondii
MBI07_g07564_MAGBIO Magnolia biondii
MBI07_g13956_MAGBIO Magnolia biondii
MBI11_g02481_MAGBIO Magnolia biondii
MCO16G246 Micromonas commoda
MD00G1067000 Malus domestica
MD00G1112200 Malus domestica
MD02G1283100 Malus domestica
MD02G1309200 Malus domestica
MD05G1179000 Malus domestica
MD07G1012500 Malus domestica
MD08G1164100 Malus domestica
MD13G1127700 Malus domestica
MD13G1132700 Malus domestica
MD15G1319300 Malus domestica
MD16G1127800 Malus domestica
MD16G1143000 Malus domestica
Medtr1g111970 Medicago truncatula
Medtr2g015680 Medicago truncatula
Medtr2g029270 Medicago truncatula
Medtr4g037495 Medicago truncatula
MELO3C005089.2 Cucumis melo
MELO3C022363.2 Cucumis melo
MELO3C023559.2 Cucumis melo
MELO3C032659.2 Cucumis melo
MELO3C035161.2 Cucumis melo
Migut.D00169 Erythranthe guttata
Migut.G01189 Erythranthe guttata
Migut.G01197 Erythranthe guttata
Migut.N00832 Erythranthe guttata
Migut.N01605 Erythranthe guttata
MSTRG.22025 Avicennia marina
MSTRG.28063 Avicennia marina
MSTRG.441 Avicennia marina
MSTRG.5028 Avicennia marina
Nitab4.5_0000001g0230 Nicotiana tabacum
Nitab4.5_0000069g0500 Nicotiana tabacum
Nitab4.5_0001123g0030 Nicotiana tabacum
Nitab4.5_0001761g0330 Nicotiana tabacum
Nitab4.5_0002199g0050 Nicotiana tabacum
Nitab4.5_0002569g0080 Nicotiana tabacum
Nitab4.5_0005286g0040 Nicotiana tabacum
Nitab4.5_0007345g0040 Nicotiana tabacum
Nitab4.5_0011787g0010 Nicotiana tabacum
Nn2g15307 Nelumbo nucifera
Nn3g16242 Nelumbo nucifera
Nn7g36401 Nelumbo nucifera
Oeu026775.1 Olea europaea
Oeu035279.1 Olea europaea
Oeu048683.1 Olea europaea
Oeu049495.1 Olea europaea
Oeu062520.1 Olea europaea
Os02g0478700 Oryza sativa ssp. japonica
Os04g0346100 Oryza sativa ssp. japonica
Os04g0399000 Oryza sativa ssp. japonica
Os07g0569000 Oryza sativa ssp. japonica
Peaxi162Scf00097g01217 Petunia axillaris
Peaxi162Scf00152g01336 Petunia axillaris
Peaxi162Scf00207g00234 Petunia axillaris
Peaxi162Scf00842g00420 Petunia axillaris
PGR044G2234 Punica granatum
PGR102G2928 Punica granatum
PGR119G0258 Punica granatum
PGR142G2083 Punica granatum
PGSC0003DMG400016367 Solanum tuberosum
PGSC0003DMG401023992 Solanum tuberosum
PGSC0003DMG401028933 Solanum tuberosum
Phvul.001G079100 Phaseolus vulgaris
Phvul.004G069100 Phaseolus vulgaris
Phvul.011G009600 Phaseolus vulgaris
Potri.001G069100 Populus trichocarpa
Potri.001G265100 Populus trichocarpa
Potri.003G161200 Populus trichocarpa
Potri.006G192900 Populus trichocarpa
Potri.009G060000 Populus trichocarpa
Pp3c11_17310 Physcomitrium patens
Pp3c18_2100 Physcomitrium patens
Pp3c1_15840 Physcomitrium patens
Pp3c21_21540 Physcomitrium patens
Pp3c22_18310 Physcomitrium patens
Pp3c2_20540 Physcomitrium patens
Pp3c5_15230 Physcomitrium patens
PRCOL_00002588 Prasinoderma coloniale
Prupe.1G212900 Prunus persica
Prupe.1G218300 Prunus persica
Prupe.2G015000 Prunus persica
Psat0s4121g0120 Pisum sativum
Psat1g169400 Pisum sativum
Psat1g199080 Pisum sativum
Psat6g057640 Pisum sativum
Psat7g196360 Pisum sativum
PSO017G0088 Papaver somniferum
PSO151G0037 Papaver somniferum
PSO339G2815 Papaver somniferum
PSO339G5226 Papaver somniferum
PSO384G0142 Papaver somniferum
PSO478G3775 Papaver somniferum
PSO541G3297 Papaver somniferum
PSO675G3311 Papaver somniferum
QL02p068815 Quercus lobata
QL02p086813 Quercus lobata
QL04p008271 Quercus lobata
RcHm_v2.0_Chr1g0316471 Rosa chinensis
RcHm_v2.0_Chr3g0487351 Rosa chinensis
RcHm_v2.0_Chr4g0428571 Rosa chinensis
RcHm_v2.0_Chr4g0429251 Rosa chinensis
Rhsim12G0100800 Rhododendron simsii
Sabra01G0048400 Salix brachista
Sabra03G0117200 Salix brachista
Sabra06G0148200 Salix brachista
Sabra09G0044200 Salix brachista
Sabra16G0162900 Salix brachista
SalBow2G1468 Salvia bowleyana
SalBow3G1380 Salvia bowleyana
SalBow3G2800 Salvia bowleyana
SalBow3G4439 Salvia bowleyana
SalBow3G4536 Salvia bowleyana
SalBow4G1412 Salvia bowleyana
SalBow6G6124 Salvia bowleyana
SalBow7G3555 Salvia bowleyana
SalBow7G3650 Salvia bowleyana
SalBow7G4183 Salvia bowleyana
Sc07g0003890 Simmondsia chinensis
Sc11g0009120 Simmondsia chinensis
Sed0005297 Sechium edule
Sed0007124 Sechium edule
Sed0015725 Sechium edule
Sed0017511 Sechium edule
Sed0020202 Sechium edule
SGA_v2.0_scaffold161G37810 Striga asiatica
SGA_v2.0_scaffold161G37811 Striga asiatica
SGA_v2.0_scaffold5G02964 Striga asiatica
SMO196G0276 Selaginella moellendorffii
SMO367G0051 Selaginella moellendorffii
Solyc01g008080.3 Solanum lycopersicum
Solyc01g008090.4 Solanum lycopersicum
Solyc06g068710.3 Solanum lycopersicum
Solyc11g007060.2 Solanum lycopersicum
Solyc11g020150.1 Solanum lycopersicum
Solyc11g020350.1 Solanum lycopersicum
Solyc11g020490.3 Solanum lycopersicum
Sopen01g003640 Solanum pennellii
Sopen06g025990 Solanum pennellii
Sopen11g002980 Solanum pennellii
Sp2g18430 Schrenkiella parvula
Sp2g18440 Schrenkiella parvula
Sp4g27760 Schrenkiella parvula
Sp5g02270 Schrenkiella parvula
TAR374G0046 Trochodendron aralioides
TAR622G0771 Trochodendron aralioides
TAR623G0231 Trochodendron aralioides
TAR623G1737 Trochodendron aralioides
THA.LOC104799991 Tarenaya hassleriana
THA.LOC104801434 Tarenaya hassleriana
THA.LOC104802009 Tarenaya hassleriana
THA.LOC104807231 Tarenaya hassleriana
THA.LOC104816698 Tarenaya hassleriana
Thecc.01G179000 Theobroma cacao
Thecc.01G409700 Theobroma cacao
Thecc.04G049700 Theobroma cacao
Thecc.05G309900 Theobroma cacao
Thhalv10001700m.g Eutrema salsugineum
Thhalv10003674m.g Eutrema salsugineum
Thhalv10005209m.g Eutrema salsugineum
Thhalv10006345m.g Eutrema salsugineum
Thhalv10009228m.g Eutrema salsugineum
TPR.G11654 Trifolium pratense
TPR.G3660 Trifolium pratense
TWI09G0484 Tripterygium wilfordii
TWI18G0127 Tripterygium wilfordii
TWI36G0837 Tripterygium wilfordii
TWI38G0079 Tripterygium wilfordii
TWI38G0116 Tripterygium wilfordii
TWI63G0076 Tripterygium wilfordii
TWI73G0713 Tripterygium wilfordii
TWI75G1768 Tripterygium wilfordii
unitig_26.g10434 Utricularia gibba
unitig_578.g16692 Utricularia gibba
unitig_747.g21108 Utricularia gibba
unitig_749.g13334 Utricularia gibba
vmacro13675 Vaccinium macrocarpon
vmacro16069 Vaccinium macrocarpon
vmacro18396 Vaccinium macrocarpon
VMungo1127G2137 Vigna mungo
Zm00001eb107220 Zea mays
Zm00001eb202910 Zea mays
Zm00001eb214990 Zea mays
Zm00001eb241090 Zea mays
Zm00001eb324710 Zea mays

User provided reference genes

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