Gene: AT2G45710

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G45710
  • Transcript Identifier AT2G45710.1
  • Gene Type Coding gene
  • Location Chr2 : 18831243-18831999 : positive

Gene Family Information

  • ID HOM05D001393
  • #Genes/#Species 450/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G45710.1
  • uniprot O64650

Descriptions

  • Description Zinc-binding ribosomal protein family protein
  • Computational description Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, nucleolus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein S27e (InterPro:IPR000592); BEST Arabidopsis thaliana protein match is: ribosomal protein S27 (TAIR:AT3G61110.1); Has 1004 Blast hits to 1004 proteins in 364 species: Archae - 106; Bacteria - 0; Metazoa - 449; Fungi - 151; Plants - 149; Viruses - 0; Other Eukaryotes - 149 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation
GO:0000028
IBA
Gene Ontologyribosomal small subunit assembly1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IDA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003723
IBA
Gene OntologyRNA binding1
GO:0003729
IDA, HDA
Gene OntologymRNA binding2 3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma4
GO:0005829
IDA
GOA Databasecytosol
GO:0022626
IDA
GOA Databasecytosolic ribosome
GO:0022626
HDA
Gene Ontologycytosolic ribosome5
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005730
IDA
GOA Databasenucleolus
GO:0005730
HDA
Gene Ontologynucleolus6
GO:0022627
IDA
GOA Databasecytosolic small ribosomal subunit
GO:0022627
HDA
IBA
Gene Ontologycytosolic small ribosomal subunit1 7
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011332 Zinc-binding ribosomal protein
IPR000592 Ribosomal protein S27
IPR023407 Ribosomal protein S27, zinc-binding domain superfamily
Mapman id Description
17.1.3.1.28 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS27