Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p10890 Brassica napus
A03p20900 Brassica napus
A05p08100 Brassica napus
A05p40150 Brassica napus
A10p18220 Brassica napus
Aa31LG1G12910 Aethionema arabicum
Aa31LG5G18690 Aethionema arabicum
Aa31LG8G4740 Aethionema arabicum
Aa31sc88G50 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2774 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.354 Anthoceros agrestis
Actinidia07204 Actinidia chinensis
Actinidia11483 Actinidia chinensis
Actinidia13160 Actinidia chinensis
Actinidia20805 Actinidia chinensis
Actinidia24173 Actinidia chinensis
Actinidia29012 Actinidia chinensis
Actinidia32577 Actinidia chinensis
Ah.01g004670 Amaranthus hybridus
Ah.04g159270 Amaranthus hybridus
Ah.06g195290 Amaranthus hybridus
Ah.12g064400 Amaranthus hybridus
AL3G19620 Arabidopsis lyrata
AL3G19640 Arabidopsis lyrata
AL4G34800 Arabidopsis lyrata
AL6G33810 Arabidopsis lyrata
AL8G13400 Arabidopsis lyrata
Aqoxy1G00007 Aquilegia oxysepala
Aqoxy1G00815 Aquilegia oxysepala
Aqoxy2G02364 Aquilegia oxysepala
Aqoxy5G03801 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.085SIZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.24KS4K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.69Y2E9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F0505K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FMIT1J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H94RDL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IK1H1Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NPHB92 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UJ68TN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W33KED Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y2PT15 Arachis hypogaea
AT2G37860 Arabidopsis thaliana
AT3G08630 Arabidopsis thaliana
AT3G08640 Arabidopsis thaliana
AT5G22790 Arabidopsis thaliana
ATR0307G032 Amborella trichopoda
ATR0559G260 Amborella trichopoda
Atru.chr3.3403 Acer truncatum
Atru.chr8.2077 Acer truncatum
Atru.chr8.65 Acer truncatum
AUR62000274 Chenopodium quinoa
AUR62006621 Chenopodium quinoa
AUR62023964 Chenopodium quinoa
AUR62024940 Chenopodium quinoa
AUR62030604 Chenopodium quinoa
AUR62031764 Chenopodium quinoa
BcaB01g04694 Brassica carinata
BcaB02g09241 Brassica carinata
BcaB04g21248 Brassica carinata
BcaB05g21534 Brassica carinata
BcaB07g32705 Brassica carinata
BcaB08g36408 Brassica carinata
BcaC01g05588 Brassica carinata
BcaC01g05680 Brassica carinata
BcaC01g05741 Brassica carinata
BcaC01g06568 Brassica carinata
BcaC02g11916 Brassica carinata
BcaC04g19597 Brassica carinata
BcaC09g47980 Brassica carinata
BolC1t05498H Brassica oleracea
BolC3t13325H Brassica oleracea
BolC3t13721H Brassica oleracea
BolC3t14853H Brassica oleracea
BolC4t22606H Brassica oleracea
BolC5t34574H Brassica oleracea
BolC7t45659H Brassica oleracea
BolC9t58259H Brassica oleracea
BraA01t04339Z Brassica rapa
BraA03t10399Z Brassica rapa
BraA03t11330Z Brassica rapa
BraA05t19778Z Brassica rapa
BraA10t43897Z Brassica rapa
C03p12530 Brassica napus
C03p23270 Brassica napus
C03p24550 Brassica napus
C04p10030 Brassica napus
C05p59230 Brassica napus
C07p51670 Brassica napus
C09p53830 Brassica napus
CAN.G1005.4 Capsicum annuum
CAN.G229.34 Capsicum annuum
CAN.G644.42 Capsicum annuum
CAN.G659.18 Capsicum annuum
CANSAT35G0028 Cannabis sativa
CANSAT55G0001 Cannabis sativa
CANSAT64G0750 Cannabis sativa
CARHR082930 Cardamine hirsuta
CARHR082940 Cardamine hirsuta
CARHR132410 Cardamine hirsuta
CARHR190810 Cardamine hirsuta
Carub.0003s0776 Capsella rubella
Carub.0003s0777 Capsella rubella
Carub.0004s1977 Capsella rubella
Carub.0006s2050 Capsella rubella
Ca_01688_v3 Cicer arietinum L.
Ca_07573_v3 Cicer arietinum L.
Ca_07791_v3 Cicer arietinum L.
Ca_07792_v3 Cicer arietinum L.
Ca_26602_v3 Cicer arietinum L.
CBR_g31200 Chara braunii
CBR_g48677 Chara braunii
CBR_g54103 Chara braunii
Cc01_g09810 Coffea canephora
Cc01_g09820 Coffea canephora
Cc01_g09950 Coffea canephora
Cc06_g00220 Coffea canephora
Cc06_g02160 Coffea canephora
CDE03G0465 Ceratophyllum demersum
CDE04G1500 Ceratophyllum demersum
CDE04G1641 Ceratophyllum demersum
CDE04G3261 Ceratophyllum demersum
CDE04G3779 Ceratophyllum demersum
CDE07G0789 Ceratophyllum demersum
CDE07G0990 Ceratophyllum demersum
Cfa010101 Carpinus fangiana
Cfa017004 Carpinus fangiana
Cfa017310 Carpinus fangiana
Ciclev10011995m.g Citrus clementina
Ciclev10012066m.g Citrus clementina
Ciclev10028580m.g Citrus clementina
CiPaw.05G131800 Carya illinoinensis
CiPaw.09G199900 Carya illinoinensis
CiPaw.09G223000 Carya illinoinensis
CiPaw.10G148700 Carya illinoinensis
CiPaw.10G166200 Carya illinoinensis
CiPaw.13G142100 Carya illinoinensis
ClCG02G021810 Citrullus lanatus
ClCG10G021510 Citrullus lanatus
COL.COLO4_03909 Corchorus olitorius
COL.COLO4_05676 Corchorus olitorius
COL.COLO4_12154 Corchorus olitorius
COL.COLO4_12157 Corchorus olitorius
COL.COLO4_14714 Corchorus olitorius
COL.COLO4_19273 Corchorus olitorius
Cpa.g.sc0.74 Carica papaya
Cpa.g.sc47.45 Carica papaya
Cpa.g.sc56.47 Carica papaya
Cre02.g141100 Chlamydomonas reinhardtii
Cre16.g678000 Chlamydomonas reinhardtii
CsaV3_3G034510 Cucumis sativus L.
CsaV3_4G027370 Cucumis sativus L.
CsaV3_6G014600 Cucumis sativus L.
CSS0014376 Camellia sinensis var. sinensis
CSS0027244 Camellia sinensis var. sinensis
CSS0031444 Camellia sinensis var. sinensis
CSS0042307 Camellia sinensis var. sinensis
CSS0044003 Camellia sinensis var. sinensis
DCAR_006503 Daucus carota
DCAR_011613 Daucus carota
DCAR_023964 Daucus carota
DCAR_024053 Daucus carota
DCAR_028932 Daucus carota
Dinv16943 Davidia involucrata
Dinv29410 Davidia involucrata
Dinv35549 Davidia involucrata
Dinv37053 Davidia involucrata
Dinv37054 Davidia involucrata
Dinv37128 Davidia involucrata
Duzib093G2226 Durio zibethinus
Duzib128G0291 Durio zibethinus
Duzib133G0807 Durio zibethinus
Duzib133G1402 Durio zibethinus
Duzib151G0515 Durio zibethinus
Duzib168G0059 Durio zibethinus
Duzib212G0729 Durio zibethinus
ECA236G2243 Erigeron canadensis
ECA236G2626 Erigeron canadensis
ECA248G0680 Erigeron canadensis
EL10Ac2g02655 Beta vulgaris
EL10Ac4g10022 Beta vulgaris
EL10Ac9g21054 Beta vulgaris
Eucgr.B02721 Eucalyptus grandis
Eucgr.B03901 Eucalyptus grandis
Eucgr.K01298 Eucalyptus grandis
FAN02G3410 Fragaria x ananassa
FAN02G3941 Fragaria x ananassa
FAN05G3086 Fragaria x ananassa
FAN05G5556 Fragaria x ananassa
FAN09G0370 Fragaria x ananassa
FAN11G3135 Fragaria x ananassa
FAN14G0938 Fragaria x ananassa
FAN16G3298 Fragaria x ananassa
FAN21G4064 Fragaria x ananassa
FAN25G3565 Fragaria x ananassa
FvH4_3g30080 Fragaria vesca
FvH4_6g09440 Fragaria vesca
FvH4_6g12860 Fragaria vesca
Glyma.07G138400 Glycine max
Glyma.09G271800 Glycine max
Glyma.12G180500 Glycine max
Glyma.13G320300 Glycine max
Glyma.16G221100 Glycine max
Glyma.18G188800 Glycine max
Glyma.18G217200 Glycine max
Gohir.A01G221400 Gossypium hirsutum
Gohir.A02G001600 Gossypium hirsutum
Gohir.A02G001700 Gossypium hirsutum
Gohir.A09G091900 Gossypium hirsutum
Gohir.A13G223200 Gossypium hirsutum
Gohir.D01G210400 Gossypium hirsutum
Gohir.D02G001900 Gossypium hirsutum
Gohir.D02G002000 Gossypium hirsutum
Gohir.D09G091800 Gossypium hirsutum
Gorai.002G256100 Gossypium raimondii
Gorai.005G002400 Gossypium raimondii
Gorai.005G002500 Gossypium raimondii
Gorai.006G108400 Gossypium raimondii
Gorai.013G258700 Gossypium raimondii
GSVIVG01031414001 Vitis vinifera
GSVIVG01034077001 Vitis vinifera
HanXRQChr01g0000421 Helianthus annuus
HanXRQChr01g0002571 Helianthus annuus
HanXRQChr06g0179601 Helianthus annuus
HanXRQChr09g0267511 Helianthus annuus
HanXRQChr09g0268901 Helianthus annuus
HanXRQChr11g0320791 Helianthus annuus
HanXRQChr11g0345091 Helianthus annuus
HanXRQChr14g0443071 Helianthus annuus
HanXRQChr14g0451921 Helianthus annuus
HanXRQChr14g0454871 Helianthus annuus
Haze_20871 Corylus avellana
Haze_21202 Corylus avellana
Haze_23467 Corylus avellana
Hma1.2p1_0051F.1_g029800 Hydrangea macrophylla
Hma1.2p1_0106F.1_g051190 Hydrangea macrophylla
Hma1.2p1_0174F.1_g076640 Hydrangea macrophylla
Hma1.2p1_1498F.1_g287140 Hydrangea macrophylla
HPP92_000655 Vanilla planifolia
HPP92_000691 Vanilla planifolia
HPP92_008564 Vanilla planifolia
HPP92_012616 Vanilla planifolia
HPP92_018986 Vanilla planifolia
Hund00799 Selenicereus undatus
Hund11324 Selenicereus undatus
Hund14495 Selenicereus undatus
Lalb_Chr01g0023941 Lupinus albus
Lalb_Chr03g0042571 Lupinus albus
Lalb_Chr03g0043851 Lupinus albus
Lalb_Chr07g0195781 Lupinus albus
Lalb_Chr19g0125131 Lupinus albus
Lalb_Chr22g0350561 Lupinus albus
Lj1C218T7 Lonicera japonica
Lj1g0012528 Lotus japonicus
Lj1g0016877 Lotus japonicus
Lj3A962T51 Lonicera japonica
Lj3E939T1 Lonicera japonica
Lj3g0008079 Lotus japonicus
Lj3g0010561 Lotus japonicus
Lsat_1_v5_gn_2_96641 Lactuca sativa
Lsat_1_v5_gn_5_151420 Lactuca sativa
Lsat_1_v5_gn_8_110401 Lactuca sativa
Manes.08G168200 Manihot esculenta
Manes.09G097000 Manihot esculenta
Manes.09G121900 Manihot esculenta
Manes.11G155600 Manihot esculenta
Mapoly0019s0041 Marchantia polymorpha
Mapoly0083s0092 Marchantia polymorpha
MBI05_g02652_MAGBIO Magnolia biondii
MBI14_g08996_MAGBIO Magnolia biondii
MBI15_g16010_MAGBIO Magnolia biondii
MBI19_g15082_MAGBIO Magnolia biondii
MCO05G396 Micromonas commoda
MCO07G336 Micromonas commoda
MD03G1132600 Malus domestica
MD04G1137400 Malus domestica
MD04G1177700 Malus domestica
MD07G1117800 Malus domestica
MD11G1154900 Malus domestica
MD12G1193000 Malus domestica
Medtr2g084605 Medicago truncatula
Medtr7g064130 Medicago truncatula
Medtr7g064190 Medicago truncatula
Medtr7g074070 Medicago truncatula
Medtr7g074090 Medicago truncatula
MELO3C009222.2 Cucumis melo
MELO3C021464.2 Cucumis melo
MELO3C025256.2 Cucumis melo
Migut.D02324 Erythranthe guttata
Migut.J00274 Erythranthe guttata
Migut.J00560 Erythranthe guttata
Migut.L01530 Erythranthe guttata
MSTRG.18718 Avicennia marina
MSTRG.19058 Avicennia marina
MSTRG.19485 Avicennia marina
Nitab4.5_0000362g0100 Nicotiana tabacum
Nitab4.5_0000442g0220 Nicotiana tabacum
Nitab4.5_0001215g0120 Nicotiana tabacum
Nitab4.5_0001876g0010 Nicotiana tabacum
Nitab4.5_0002571g0070 Nicotiana tabacum
Nitab4.5_0006423g0020 Nicotiana tabacum
Nitab4.5_0007589g0020 Nicotiana tabacum
Nitab4.5_0008207g0050 Nicotiana tabacum
Nitab4.5_0011665g0020 Nicotiana tabacum
Nn2g11270 Nelumbo nucifera
Nn7g37268 Nelumbo nucifera
Nn7g37269 Nelumbo nucifera
Nn7g37469 Nelumbo nucifera
Oeu007823.1 Olea europaea
Oeu023728.2 Olea europaea
Oeu053776.1 Olea europaea
Os01g0812900 Oryza sativa ssp. japonica
Os03g0390900 Oryza sativa ssp. japonica
Os04g0524400 Oryza sativa ssp. japonica
Os07g0240300 Oryza sativa ssp. japonica
Os11g0432800 Oryza sativa ssp. japonica
Peaxi162Scf00318g00316 Petunia axillaris
Peaxi162Scf00318g00320 Petunia axillaris
Peaxi162Scf00374g00033 Petunia axillaris
Peaxi162Scf00732g00133 Petunia axillaris
Peaxi162Scf00789g00212 Petunia axillaris
PGR004G2868 Punica granatum
PGR031G2025 Punica granatum
PGR102G0092 Punica granatum
PGR102G3113 Punica granatum
PGSC0003DMG400000435 Solanum tuberosum
PGSC0003DMG400006564 Solanum tuberosum
PGSC0003DMG400024261 Solanum tuberosum
PGSC0003DMG400027703 Solanum tuberosum
Phvul.005G128300 Phaseolus vulgaris
Phvul.008G079300 Phaseolus vulgaris
Phvul.008G114600 Phaseolus vulgaris
Phvul.010G059300 Phaseolus vulgaris
Potri.006G111300 Populus trichocarpa
Potri.009G150400 Populus trichocarpa
Potri.016G103100 Populus trichocarpa
Potri.016G140700 Populus trichocarpa
Pp3c11_2790 Physcomitrium patens
Pp3c2_21600 Physcomitrium patens
Pp3c2_34630 Physcomitrium patens
Pp3c4_25760 Physcomitrium patens
Pp3c7_21310 Physcomitrium patens
PRCOL_00001641 Prasinoderma coloniale
PRCOL_00002262 Prasinoderma coloniale
PRCOL_00003745 Prasinoderma coloniale
PRCOL_00007098 Prasinoderma coloniale
Prupe.3G101300 Prunus persica
Prupe.6G117100 Prunus persica
Prupe.6G169100 Prunus persica
Prupe.6G263400 Prunus persica
Prupe.6G297600 Prunus persica
Psat3g117120 Pisum sativum
Psat3g117160 Pisum sativum
Psat3g133000 Pisum sativum
Psat5g254080 Pisum sativum
PSO210G6197 Papaver somniferum
PSO339G6381 Papaver somniferum
PSO384G4003 Papaver somniferum
PSO478G4388 Papaver somniferum
PSO541G3390 Papaver somniferum
PSO675G2144 Papaver somniferum
PSO782G3471 Papaver somniferum
PSO832G3380 Papaver somniferum
QL01p014032 Quercus lobata
QL07p004779 Quercus lobata
QL07p004792 Quercus lobata
QL07p028553 Quercus lobata
QL07p031279 Quercus lobata
QL07p031623 Quercus lobata
RcHm_v2.0_Chr3g0459911 Rosa chinensis
RcHm_v2.0_Chr3g0464891 Rosa chinensis
RcHm_v2.0_Chr5g0055771 Rosa chinensis
Rhsim04G0162800 Rhododendron simsii
Rhsim05G0233200 Rhododendron simsii
Rhsim13G0104400 Rhododendron simsii
Sabra04G0157200 Salix brachista
Sabra06G0086500 Salix brachista
Sabra09G0119100 Salix brachista
Sabra16G0102900 Salix brachista
SalBow5G0484 Salvia bowleyana
SalBow6G1663 Salvia bowleyana
SalBow6G5450 Salvia bowleyana
Sc01g0004720 Simmondsia chinensis
Sc20g0007220 Simmondsia chinensis
Sc21g0004630 Simmondsia chinensis
Sed0001093 Sechium edule
Sed0004297 Sechium edule
Sed0006115 Sechium edule
Sed0010132 Sechium edule
Sed0012466 Sechium edule
Sed0027132 Sechium edule
SEGI_04502 Sequoiadendron giganteum
SEGI_23964 Sequoiadendron giganteum
SEGI_32198 Sequoiadendron giganteum
SEGI_34489 Sequoiadendron giganteum
SGA_v2.0_scaffold192G40636 Striga asiatica
SGA_v2.0_scaffold193G40718 Striga asiatica
SGA_v2.0_scaffold21G09444 Striga asiatica
SGA_v2.0_scaffold75G24972 Striga asiatica
SHI12948 Sapria himalayana
SMO116G0197 Selaginella moellendorffii
SMO143G0172 Selaginella moellendorffii
SMO164G0089 Selaginella moellendorffii
Solyc09g011340.3 Solanum lycopersicum
Solyc09g031940.1 Solanum lycopersicum
Solyc10g074880.3 Solanum lycopersicum
Solyc11g066740.2 Solanum lycopersicum
Sopen09g006060 Solanum pennellii
Sopen09g014410 Solanum pennellii
Sopen10g027370 Solanum pennellii
Sopen11g026480 Solanum pennellii
Sp3g07080 Schrenkiella parvula
Sp4g20170 Schrenkiella parvula
Sp6g22640 Schrenkiella parvula
SpUn1555_0010 Schrenkiella parvula
TAR623G0826 Trochodendron aralioides
TAR633G1378 Trochodendron aralioides
TAR633G2110 Trochodendron aralioides
TAR636G0613 Trochodendron aralioides
THA.LOC104810892 Tarenaya hassleriana
THA.LOC104820495 Tarenaya hassleriana
THA.LOC104823332 Tarenaya hassleriana
THA.LOC104824523 Tarenaya hassleriana
Thecc.04G148000 Theobroma cacao
Thecc.05G030600 Theobroma cacao
Thecc.09G293400 Theobroma cacao
Thhalv10013586m.g Eutrema salsugineum
Thhalv10016685m.g Eutrema salsugineum
Thhalv10021063m.g Eutrema salsugineum
Thhalv10021092m.g Eutrema salsugineum
TPR.G24332 Trifolium pratense
TPR.G24338 Trifolium pratense
TPR.G27950 Trifolium pratense
TPR.G32381 Trifolium pratense
TWI53G1520 Tripterygium wilfordii
TWI74G0003 Tripterygium wilfordii
TWI74G1104 Tripterygium wilfordii
TWI74G1600 Tripterygium wilfordii
TWI75G1844 Tripterygium wilfordii
TWI77G0028 Tripterygium wilfordii
TWI77G0491 Tripterygium wilfordii
unitig_0.g961 Utricularia gibba
unitig_747.g21967 Utricularia gibba
unitig_749.g14231 Utricularia gibba
vmacro03227 Vaccinium macrocarpon
vmacro08630 Vaccinium macrocarpon
vmacro11971 Vaccinium macrocarpon
vmacro23024 Vaccinium macrocarpon
VMungo0331G1435 Vigna mungo
VMungo1080G1333 Vigna mungo
VMungo1383G0432 Vigna mungo
VMungo1383G0666 Vigna mungo
Zm00001eb076950 Zea mays
Zm00001eb128660 Zea mays
Zm00001eb150040 Zea mays
Zm00001eb303990 Zea mays
Zm00001eb369170 Zea mays

User provided reference genes

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