Gene: AT3G08640
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G08640
- Transcript Identifier AT3G08640.1
- Gene Type Coding gene
- Location Chr3 : 2622992-2624005 : positive
Gene Family Information
- ID HOM05D001368
- #Genes/#Species 457/100
- Phylogenetic origin
- ID ORTHO05D003846
- #Genes/#Species 202/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT3G08640.1
- Alias RER3,RETICULATA-RELATED 3
- uniprot Q9C9Z2
Descriptions
- Description alphavirus core family protein (DUF3411)
- Computational description Protein of unknown function (DUF3411); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3411 (InterPro:IPR021825); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3411) (TAIR:AT3G08630.1); Has 11715 Blast hits to 4977 proteins in 490 species: Archae - 4; Bacteria - 2620; Metazoa - 4563; Fungi - 550; Plants - 2459; Viruses - 100; Other Eukaryotes - 1419 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048366 | IMP | Gene Ontology | leaf development | 1 |
| GO:0009793 | IMP | Gene Ontology | embryo development ending in seed dormancy | 1 |
| GO:0009648 | IMP | Gene Ontology | photoperiodism | 1 |
| GO:0000302 | IMP | Gene Ontology | response to reactive oxygen species | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003674 | ND | Gene Ontology | molecular_function |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0009507 | IDA, HDA ISM | Gene Ontology | chloroplast | 1 2 |
| GO:0009536 | IDA IEA | GOA Database | plastid | |
| GO:0009536 | HDA | Gene Ontology | plastid | 3 |
| GO:0009941 | IDA | GOA Database | chloroplast envelope | |
| GO:0009941 | HDA | Gene Ontology | chloroplast envelope | 4 |
| GO:0031969 | IEA | GOA Database | chloroplast membrane | |
| GO:0005829 | HDA | Gene Ontology | cytosol | 5 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR021825 | Protein RETICULATA-related |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |