Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p14020 Brassica napus
A02p25810 Brassica napus
A03p53750 Brassica napus
A04p22410 Brassica napus
A08p35680 Brassica napus
Aa31LG1G6700 Aethionema arabicum
Aa31LG5G7040 Aethionema arabicum
Aa31LG6G4750 Aethionema arabicum
Aa31LG6G4760 Aethionema arabicum
Aa31LG6G4770 Aethionema arabicum
Aa31LG6G4780 Aethionema arabicum
Aa31LG6G4790 Aethionema arabicum
Aa31LG6G4800 Aethionema arabicum
Aa31LG6G4810 Aethionema arabicum
Aa31LG6G4820 Aethionema arabicum
Aa31LG9G10370 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1624 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.3021 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3555 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5371 Anthoceros agrestis
Actinidia02080 Actinidia chinensis
Actinidia13008 Actinidia chinensis
Actinidia14471 Actinidia chinensis
Actinidia23915 Actinidia chinensis
Actinidia31410 Actinidia chinensis
Actinidia34430 Actinidia chinensis
Ah.08g220190 Amaranthus hybridus
Ah.12g058170 Amaranthus hybridus
AL1G17570 Arabidopsis lyrata
AL4G23950 Arabidopsis lyrata
AL6G47010 Arabidopsis lyrata
AL7G30800 Arabidopsis lyrata
AL7G30820 Arabidopsis lyrata
Aqoxy1G00849 Aquilegia oxysepala
Aqoxy5G03942 Aquilegia oxysepala
Aqoxy6G02366 Aquilegia oxysepala
Aqoxy7G00629 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.11UTVE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1RGA44 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4UPT2U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8F47NR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BITW79 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H8PYG7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IBW8RK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SFT1LS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T6CC7G Arachis hypogaea
AT1G07420 Arabidopsis thaliana
AT2G29390 Arabidopsis thaliana
AT4G12110 Arabidopsis thaliana
AT4G22755 Arabidopsis thaliana
AT4G22756 Arabidopsis thaliana
ATR0559G009 Amborella trichopoda
ATR0810G261 Amborella trichopoda
Atru.chr3.4008 Acer truncatum
Atru.chr5.307 Acer truncatum
Atru.chr9.1452 Acer truncatum
AUR62001729 Chenopodium quinoa
AUR62010519 Chenopodium quinoa
AUR62017380 Chenopodium quinoa
AUR62020046 Chenopodium quinoa
AUR62033540 Chenopodium quinoa
AUR62033541 Chenopodium quinoa
AUR62043104 Chenopodium quinoa
BcaB02g06742 Brassica carinata
BcaB03g13396 Brassica carinata
BcaB05g23762 Brassica carinata
BcaB06g28302 Brassica carinata
BcaC02g08089 Brassica carinata
BcaC03g16308 Brassica carinata
BcaC07g42000 Brassica carinata
BcaC07g42466 Brassica carinata
BcaC09g51084 Brassica carinata
BcaC09g51087 Brassica carinata
BcaNung01035 Brassica carinata
BcaNung01036 Brassica carinata
BolC1t01653H Brassica oleracea
BolC1t01655H Brassica oleracea
BolC2t10132H Brassica oleracea
BolC4t25511H Brassica oleracea
BolC4t27374H Brassica oleracea
BolC7t45705H Brassica oleracea
BolC8t47102H Brassica oleracea
BolC8t52116H Brassica oleracea
BolC8t52587H Brassica oleracea
BraA01t01349Z Brassica rapa
BraA02t07574Z Brassica rapa
BraA03t14441Z Brassica rapa
BraA04t17789Z Brassica rapa
BraA08t35474Z Brassica rapa
C01p17160 Brassica napus
C02p41160 Brassica napus
C04p58560 Brassica napus
C07p52120 Brassica napus
C08p03010 Brassica napus
CAN.G141.16 Capsicum annuum
CAN.G388.17 Capsicum annuum
CAN.G394.78 Capsicum annuum
CAN.G630.64 Capsicum annuum
CANSAT21G2192 Cannabis sativa
CANSAT21G2503 Cannabis sativa
CANSAT54G0571 Cannabis sativa
CARHR007160 Cardamine hirsuta
CARHR122670 Cardamine hirsuta
CARHR229690 Cardamine hirsuta
CARHR229700 Cardamine hirsuta
CARHR254070 Cardamine hirsuta
Carub.0001s0673 Capsella rubella
Carub.0004s1045 Capsella rubella
Carub.0006s3129 Capsella rubella
Carub.0007s1852 Capsella rubella
Carub.0007s1853 Capsella rubella
Carub.0007s1854 Capsella rubella
Ca_12285_v3 Cicer arietinum L.
CBR_g12719 Chara braunii
CBR_g57861 Chara braunii
Cc01_g09410 Coffea canephora
Cc01_g13410 Coffea canephora
Cc08_g13340 Coffea canephora
CDE02G0769 Ceratophyllum demersum
CDE02G4045 Ceratophyllum demersum
CDE04G0260 Ceratophyllum demersum
CDE04G0422 Ceratophyllum demersum
CDE04G1412 Ceratophyllum demersum
CDE04G1807 Ceratophyllum demersum
CDE12G0030 Ceratophyllum demersum
CDE12G0383 Ceratophyllum demersum
CDE12G0628 Ceratophyllum demersum
CDE12G0900 Ceratophyllum demersum
Cfa011574 Carpinus fangiana
Cfa012024 Carpinus fangiana
Cfa012025 Carpinus fangiana
Ciclev10021364m.g Citrus clementina
Ciclev10029052m.g Citrus clementina
CiPaw.11G146700 Carya illinoinensis
CiPaw.12G104200 Carya illinoinensis
CiPaw.13G087900 Carya illinoinensis
CiPaw.14G064700 Carya illinoinensis
ClCG03G001240 Citrullus lanatus
ClCG10G003210 Citrullus lanatus
ClCG10G003220 Citrullus lanatus
COL.COLO4_12545 Corchorus olitorius
COL.COLO4_12546 Corchorus olitorius
COL.COLO4_18584 Corchorus olitorius
COL.COLO4_23857 Corchorus olitorius
Cpa.g.sc18.112 Carica papaya
Cpa.g.sc29.80 Carica papaya
Cpa.g.sc81.89 Carica papaya
CsaV3_1G034570 Cucumis sativus L.
CsaV3_1G035670 Cucumis sativus L.
CsaV3_3G003250 Cucumis sativus L.
CSS0011567 Camellia sinensis var. sinensis
CSS0033464 Camellia sinensis var. sinensis
CSS0034009 Camellia sinensis var. sinensis
CSS0049702 Camellia sinensis var. sinensis
DCAR_000859 Daucus carota
DCAR_005934 Daucus carota
DCAR_006783 Daucus carota
DCAR_007426 Daucus carota
DCAR_008453 Daucus carota
Dinv17053 Davidia involucrata
Dinv32374 Davidia involucrata
Dinv34300 Davidia involucrata
Dinv37756 Davidia involucrata
Dinv39070 Davidia involucrata
Dinv42997 Davidia involucrata
Dinv43100 Davidia involucrata
Duzib084G1187 Durio zibethinus
Duzib138G0668 Durio zibethinus
Duzib138G1066 Durio zibethinus
Duzib150G0391 Durio zibethinus
Duzib170G0656 Durio zibethinus
Duzib205G1281 Durio zibethinus
ECA233G2930 Erigeron canadensis
ECA246G3440 Erigeron canadensis
ECA247G0826 Erigeron canadensis
ECA248G1979 Erigeron canadensis
EL10Ac5g12630 Beta vulgaris
EL10Ac7g16077 Beta vulgaris
Eucgr.D01979 Eucalyptus grandis
Eucgr.E00478 Eucalyptus grandis
Eucgr.J02002 Eucalyptus grandis
FAN01G2964 Fragaria x ananassa
FAN03G0603 Fragaria x ananassa
FAN04G0482 Fragaria x ananassa
FAN06G0305 Fragaria x ananassa
FAN06G3993 Fragaria x ananassa
FAN08G3341 Fragaria x ananassa
FAN10G0208 Fragaria x ananassa
FAN10G1741 Fragaria x ananassa
FAN11G0311 Fragaria x ananassa
FAN13G1032 Fragaria x ananassa
FAN16G2767 Fragaria x ananassa
FAN18G2065 Fragaria x ananassa
FAN21G1343 Fragaria x ananassa
FAN25G3201 Fragaria x ananassa
FvH4_3g37020 Fragaria vesca
FvH4_5g00810 Fragaria vesca
FvH4_7g11850 Fragaria vesca
Glyma.01G035100 Glycine max
Glyma.02G030900 Glycine max
Glyma.05G053300 Glycine max
Glyma.05G069532 Glycine max
Glyma.09G269200 Glycine max
Glyma.17G135800 Glycine max
Gohir.A03G045300 Gossypium hirsutum
Gohir.A08G174300 Gossypium hirsutum
Gohir.A09G194800 Gossypium hirsutum
Gohir.A12G103500 Gossypium hirsutum
Gohir.A12G221400 Gossypium hirsutum
Gohir.A13G225900 Gossypium hirsutum
Gohir.D03G121700 Gossypium hirsutum
Gohir.D08G193000 Gossypium hirsutum
Gohir.D09G189100 Gossypium hirsutum
Gohir.D12G107000 Gossypium hirsutum
Gohir.D12G107100 Gossypium hirsutum
Gohir.D12G223800 Gossypium hirsutum
Gohir.D13G231300 Gossypium hirsutum
Gorai.003G128800 Gossypium raimondii
Gorai.004G203200 Gossypium raimondii
Gorai.006G211800 Gossypium raimondii
Gorai.008G116400 Gossypium raimondii
Gorai.008G116500 Gossypium raimondii
Gorai.008G240000 Gossypium raimondii
Gorai.013G261900 Gossypium raimondii
GSVIVG01006068001 Vitis vinifera
GSVIVG01016483001 Vitis vinifera
GSVIVG01024874001 Vitis vinifera
HanXRQChr01g0010671 Helianthus annuus
HanXRQChr06g0164671 Helianthus annuus
HanXRQChr06g0164691 Helianthus annuus
HanXRQChr06g0164711 Helianthus annuus
HanXRQChr06g0164751 Helianthus annuus
HanXRQChr07g0188381 Helianthus annuus
HanXRQChr08g0221461 Helianthus annuus
HanXRQChr08g0237411 Helianthus annuus
Haze_09043 Corylus avellana
Haze_09044 Corylus avellana
Haze_24186 Corylus avellana
Hma1.2p1_0033F.1_g021080 Hydrangea macrophylla
Hma1.2p1_0138F.1_g063090 Hydrangea macrophylla
Hma1.2p1_0367F.1_g137080 Hydrangea macrophylla
Hma1.2p1_0615F.1_g189630 Hydrangea macrophylla
HPP92_000740 Vanilla planifolia
HPP92_001676 Vanilla planifolia
HPP92_022572 Vanilla planifolia
HPP92_026751 Vanilla planifolia
HPP92_027962 Vanilla planifolia
Hund04915 Selenicereus undatus
Hund11558 Selenicereus undatus
Hund14656 Selenicereus undatus
Hund14657 Selenicereus undatus
Hund14658 Selenicereus undatus
Hund14659 Selenicereus undatus
Hund18884 Selenicereus undatus
Lalb_Chr05g0225321 Lupinus albus
Lalb_Chr09g0326471 Lupinus albus
Lalb_Chr09g0335131 Lupinus albus
Lalb_Chr16g0382441 Lupinus albus
Lalb_Chr16g0389601 Lupinus albus
Lalb_Chr16g0392481 Lupinus albus
Lj1A146T70 Lonicera japonica
Lj1g0000229 Lotus japonicus
Lj2A1070T72 Lonicera japonica
Lj2A207T57 Lonicera japonica
Lj2g0001704 Lotus japonicus
Lj4g0016075 Lotus japonicus
Lj9A569T55 Lonicera japonica
Lsat_1_v5_gn_5_169701 Lactuca sativa
Lsat_1_v5_gn_6_58221 Lactuca sativa
Lsat_1_v5_gn_6_9700 Lactuca sativa
Lsat_1_v5_gn_9_24081 Lactuca sativa
Manes.01G072100 Manihot esculenta
Manes.01G168500 Manihot esculenta
Manes.02G032800 Manihot esculenta
Manes.02G127900 Manihot esculenta
Mapoly0005s0236 Marchantia polymorpha
Mapoly0061s0089 Marchantia polymorpha
Mapoly0066s0107 Marchantia polymorpha
MBI05_g35180_MAGBIO Magnolia biondii
MBI10_g11073_MAGBIO Magnolia biondii
MBI12_g10761_MAGBIO Magnolia biondii
MBI12_g10762_MAGBIO Magnolia biondii
MBI14_g43664_MAGBIO Magnolia biondii
MCO01G482 Micromonas commoda
MCO04G133 Micromonas commoda
MD03G1085200 Malus domestica
MD04G1078200 Malus domestica
MD07G1008300 Malus domestica
MD07G1121200 Malus domestica
MD11G1093000 Malus domestica
Medtr2g060330 Medicago truncatula
Medtr4g102060 Medicago truncatula
Medtr5g035190 Medicago truncatula
Medtr6g039970 Medicago truncatula
Medtr7g074900 Medicago truncatula
Medtr8g063210 Medicago truncatula
MELO3C013991.2 Cucumis melo
MELO3C020602.2 Cucumis melo
Migut.A00841 Erythranthe guttata
Migut.D00873 Erythranthe guttata
Migut.N01632 Erythranthe guttata
MSTRG.12053 Avicennia marina
MSTRG.12655 Avicennia marina
MSTRG.17826 Avicennia marina
MSTRG.25553 Avicennia marina
MSTRG.4894 Avicennia marina
Nitab4.5_0000102g0360 Nicotiana tabacum
Nitab4.5_0000457g0270 Nicotiana tabacum
Nitab4.5_0000839g0120 Nicotiana tabacum
Nitab4.5_0000839g0130 Nicotiana tabacum
Nitab4.5_0002582g0040 Nicotiana tabacum
Nitab4.5_0004402g0020 Nicotiana tabacum
Nitab4.5_0004917g0060 Nicotiana tabacum
Nitab4.5_0005607g0020 Nicotiana tabacum
Nitab4.5_0008970g0020 Nicotiana tabacum
Nn1g01236 Nelumbo nucifera
Nn2g11230 Nelumbo nucifera
Nn2g13474 Nelumbo nucifera
Nn4g26395 Nelumbo nucifera
Nn8g39602 Nelumbo nucifera
Oeu005785.1 Olea europaea
Oeu007666.2 Olea europaea
Oeu035658.1 Olea europaea
Oeu037916.1 Olea europaea
Oeu040059.1 Olea europaea
Oeu040060.1 Olea europaea
Oeu053894.1 Olea europaea
Oeu056793.1 Olea europaea
Os03g0108500 Oryza sativa ssp. japonica
Os07g0101500 Oryza sativa ssp. japonica
Os10g0545200 Oryza sativa ssp. japonica
Os11g0707600 Oryza sativa ssp. japonica
Peaxi162Scf00013g03445 Petunia axillaris
Peaxi162Scf00021g01719 Petunia axillaris
Peaxi162Scf00265g00412 Petunia axillaris
Peaxi162Scf00271g00218 Petunia axillaris
Peaxi162Scf00481g00049 Petunia axillaris
PGR004G0630 Punica granatum
PGR004G0954 Punica granatum
PGR004G2430 Punica granatum
PGR031G0571 Punica granatum
PGR042G2984 Punica granatum
PGR119G2106 Punica granatum
PGSC0003DMG400002156 Solanum tuberosum
PGSC0003DMG400003929 Solanum tuberosum
PGSC0003DMG400012763 Solanum tuberosum
PGSC0003DMG400030422 Solanum tuberosum
Phvul.002G074200 Phaseolus vulgaris
Phvul.002G074300 Phaseolus vulgaris
Phvul.003G215501 Phaseolus vulgaris
Phvul.008G076300 Phaseolus vulgaris
Potri.001G116500 Populus trichocarpa
Potri.001G245300 Populus trichocarpa
Potri.003G116000 Populus trichocarpa
Potri.009G037400 Populus trichocarpa
Potri.014G069500 Populus trichocarpa
Pp3c11_23950 Physcomitrium patens
Pp3c3_9920 Physcomitrium patens
Pp3c4_31590 Physcomitrium patens
Pp3c7_1450 Physcomitrium patens
Prupe.2G145100 Prunus persica
Prupe.5G080500 Prunus persica
Prupe.6G068700 Prunus persica
Psat0s4720g0160 Pisum sativum
Psat2g110480 Pisum sativum
Psat3g116080 Pisum sativum
Psat3g116200 Pisum sativum
Psat4g068440 Pisum sativum
PSO063G7680 Papaver somniferum
PSO478G3683 Papaver somniferum
PSO782G0314 Papaver somniferum
PSO782G4949 Papaver somniferum
QL01p028015 Quercus lobata
QL12p015196 Quercus lobata
RcHm_v2.0_Chr1g0350531 Rosa chinensis
RcHm_v2.0_Chr5g0066411 Rosa chinensis
RcHm_v2.0_Chr7g0201301 Rosa chinensis
Rhsim01G0232500 Rhododendron simsii
Rhsim07G0027600 Rhododendron simsii
Rhsim12G0154700 Rhododendron simsii
Rhsim12G0155000 Rhododendron simsii
Rhsim13G0076800 Rhododendron simsii
Sabra01G0089300 Salix brachista
Sabra03G0080500 Salix brachista
Sabra09G0026400 Salix brachista
Sabra14G0049200 Salix brachista
Sabra16G0148700 Salix brachista
SalBow2G3551 Salvia bowleyana
SalBow6G1326 Salvia bowleyana
Sc01g0009190 Simmondsia chinensis
Sc21g0006060 Simmondsia chinensis
Sc22g0000550 Simmondsia chinensis
Sed0004821 Sechium edule
Sed0010463 Sechium edule
Sed0016312 Sechium edule
Sed0017952 Sechium edule
SEGI_05833 Sequoiadendron giganteum
SEGI_30970 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05579 Striga asiatica
SGA_v2.0_scaffold146G36188 Striga asiatica
SGA_v2.0_scaffold37G14842 Striga asiatica
SGA_v2.0_scaffold43G16477 Striga asiatica
SGA_v2.0_scaffold54G19465 Striga asiatica
SHI20471 Sapria himalayana
SMO115G0130 Selaginella moellendorffii
SMO119G0390 Selaginella moellendorffii
SMO146G0363 Selaginella moellendorffii
Solyc01g091320.3 Solanum lycopersicum
Solyc06g005750.3 Solanum lycopersicum
Solyc08g079570.3 Solanum lycopersicum
Sopen01g037060 Solanum pennellii
Sopen06g001740 Solanum pennellii
Sopen06g032820 Solanum pennellii
Sopen08g027920 Solanum pennellii
Sp1g06160 Schrenkiella parvula
Sp4g12120 Schrenkiella parvula
Sp6g05390 Schrenkiella parvula
Sp7g20790 Schrenkiella parvula
Sp7g20800 Schrenkiella parvula
TAR369G0605 Trochodendron aralioides
TAR374G1159 Trochodendron aralioides
TAR374G1353 Trochodendron aralioides
TAR375G0009 Trochodendron aralioides
TAR623G0631 Trochodendron aralioides
TAR629G3279 Trochodendron aralioides
TAR633G0925 Trochodendron aralioides
THA.LOC104813000 Tarenaya hassleriana
THA.LOC104813925 Tarenaya hassleriana
THA.LOC104815774 Tarenaya hassleriana
THA.LOC104826306 Tarenaya hassleriana
Thecc.01G369300 Theobroma cacao
Thecc.01G376400 Theobroma cacao
Thecc.01G376500 Theobroma cacao
Thecc.01G390800 Theobroma cacao
Thecc.03G262700 Theobroma cacao
Thecc.09G314000 Theobroma cacao
Thhalv10008485m.g Eutrema salsugineum
Thhalv10017113m.g Eutrema salsugineum
Thhalv10024722m.g Eutrema salsugineum
Thhalv10025849m.g Eutrema salsugineum
Thhalv10028846m.g Eutrema salsugineum
TPR.G16602 Trifolium pratense
TPR.G29405 Trifolium pratense
TPR.G37642 Trifolium pratense
TPR.G4420 Trifolium pratense
TWI15G0975 Tripterygium wilfordii
TWI31G1357 Tripterygium wilfordii
TWI60G1725 Tripterygium wilfordii
TWI75G0572 Tripterygium wilfordii
unitig_0.g2763 Utricularia gibba
unitig_748.g7112 Utricularia gibba
unitig_749.g14318 Utricularia gibba
vmacro03024 Vaccinium macrocarpon
vmacro13401 Vaccinium macrocarpon
vmacro14561 Vaccinium macrocarpon
vmacro16531 Vaccinium macrocarpon
vmacro16537 Vaccinium macrocarpon
VMungo0647G1775 Vigna mungo
VMungo0647G2146 Vigna mungo
VMungo1215G0127 Vigna mungo
VMungo1215G2937 Vigna mungo
VMungo1215G3264 Vigna mungo
VMungo1383G2596 Vigna mungo
Zm00001eb022670 Zea mays
Zm00001eb132640 Zea mays
Zm00001eb135830 Zea mays
Zm00001eb164330 Zea mays
Zm00001eb362010 Zea mays

User provided reference genes

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