Gene: AT4G22756
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G22756
- Transcript Identifier AT4G22756.1
- Gene Type Coding gene
- Location Chr4 : 11955124-11956695 : negative
Gene Family Information
- ID HOM05D001344
- #Genes/#Species 468/98
- Phylogenetic origin
- ID ORTHO05D002590
- #Genes/#Species 277/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G22756.1
- symbol SMO1-2
- Alias ATSMO1-2
- uniprot Q1EC69
Descriptions
- Description sterol C4-methyl oxidase 1-2
- Computational description sterol C4-methyl oxidase 1-2 (SMO1-2); FUNCTIONS IN: C-4 methylsterol oxidase activity, 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase activity, catalytic activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sterol-4alpha-methyl oxidase 1-1 (TAIR:AT4G12110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008610 | IEA | GOA Database | lipid biosynthetic process | |
| GO:0008610 | IEA | InterPro | lipid biosynthetic process | |
| GO:0016126 | IEA | GOA Database | sterol biosynthetic process | |
| GO:0016126 | IMP, IGI IBA | Gene Ontology | sterol biosynthetic process | 1 2 3 |
| GO:0008202 | IEA | GOA Database | steroid metabolic process | |
| GO:0006694 | IEA | GOA Database | steroid biosynthetic process | |
| GO:0006629 | IEA | GOA Database | lipid metabolic process | |
| GO:0009790 | IGI | Gene Ontology | embryo development | 3 |
| GO:0080064 | NAS | Gene Ontology | 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0016491 | IBA | Gene Ontology | oxidoreductase activity | 2 |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0005506 | IEA | Gene Ontology | iron ion binding | |
| GO:0005506 | IEA | InterPro | iron ion binding | |
| GO:0004497 | IEA | GOA Database | monooxygenase activity | |
| GO:0000254 | IEA | GOA Database | C-4 methylsterol oxidase activity | |
| GO:0000254 | IMP ISS, IBA | Gene Ontology | C-4 methylsterol oxidase activity | 1 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005789 | IEA | GOA Database | endoplasmic reticulum membrane | |
| GO:0005789 | IBA | Gene Ontology | endoplasmic reticulum membrane | 2 |
| GO:0005783 | IEA | GOA Database | endoplasmic reticulum | |
| GO:0005783 | IDA | Gene Ontology | endoplasmic reticulum | 3 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IBA | Gene Ontology | membrane | 2 |
| GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006694 | Fatty acid hydroxylase |
| Mapman id | Description |
|---|---|
| 5.5.2.1 | Lipid metabolism.phytosterol biosynthesis.phytosterol C4-demethylation complex.methylsterol monooxygenase component SMO1 |