Gene: TPR.G29405
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G29405
- Transcript Identifier TPR.T30417
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_scaf_1160 : 20137-22272 : negative
Gene Family Information
- ID HOM05D001344
- #Genes/#Species 468/98
- Phylogenetic origin
- ID ORTHO05D002590
- #Genes/#Species 277/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA30417.v2
- id Tp57577_TGAC_v2_gene29405.v2
- pacid 35955017
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008610 | IEA | InterPro | lipid biosynthetic process | |
| GO:0009790 | ISO | PLAZA Integrative Orthology | embryo development | AT4G12110 |
| GO:0016126 | ISO | PLAZA Integrative Orthology | sterol biosynthetic process | AT4G12110 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005506 | IEA | InterPro | iron ion binding | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0000254 | ISO | PLAZA Integrative Orthology | C-4 methylsterol oxidase activity | AT4G12110 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | ISO | PLAZA Integrative Orthology | membrane | AT4G12110 |
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT4G12110 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006694 | Fatty acid hydroxylase |
| Mapman id | Description |
|---|---|
| 5.5.2.1 | Lipid metabolism.phytosterol biosynthesis.phytosterol C4-demethylation complex.methylsterol monooxygenase component SMO1 |