Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p42770 Brassica napus
A02p44520 Brassica napus
A05p21470 Brassica napus
A06p15740 Brassica napus
A06p19030 Brassica napus
A06p30140 Brassica napus
A07p17470 Brassica napus
A08p05850 Brassica napus
A08p05860 Brassica napus
A08p29760 Brassica napus
A09p08300 Brassica napus
Aa31LG1G15030 Aethionema arabicum
Aa31LG1G18530 Aethionema arabicum
Aa31LG4G17250 Aethionema arabicum
Aa31LG7G4210 Aethionema arabicum
Aa31sc84G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1499 Anthoceros agrestis
Actinidia08884 Actinidia chinensis
Actinidia19195 Actinidia chinensis
Actinidia19936 Actinidia chinensis
Actinidia35630 Actinidia chinensis
Actinidia36820 Actinidia chinensis
Ah.02g114810 Amaranthus hybridus
Ah.02g125040 Amaranthus hybridus
Ah.03g141060 Amaranthus hybridus
Ah.11g045500 Amaranthus hybridus
AL1G32310 Arabidopsis lyrata
AL1G56160 Arabidopsis lyrata
AL2G33380 Arabidopsis lyrata
AL5G28110 Arabidopsis lyrata
AL6G50360 Arabidopsis lyrata
AL7G15870 Arabidopsis lyrata
AL7G45440 Arabidopsis lyrata
AL8G40570 Arabidopsis lyrata
AL8G45020 Arabidopsis lyrata
Aqoxy5G01589 Aquilegia oxysepala
Aqoxy5G03312 Aquilegia oxysepala
Aqoxy6G01150 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.51KVJI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F8ILKH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LQNM08 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P8MBQ4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RR5LS8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UXN8GE Arachis hypogaea
AT1G19580 Arabidopsis thaliana
AT1G47260 Arabidopsis thaliana
AT3G48680 Arabidopsis thaliana
AT5G63510 Arabidopsis thaliana
AT5G66510 Arabidopsis thaliana
ATR0568G082 Amborella trichopoda
ATR0626G207 Amborella trichopoda
Atru.chr10.1400 Acer truncatum
Atru.chr10.1409 Acer truncatum
Atru.chr13.443 Acer truncatum
Atru.chr3.620 Acer truncatum
Atru.chr6.1821 Acer truncatum
AUR62004079 Chenopodium quinoa
AUR62004080 Chenopodium quinoa
AUR62007591 Chenopodium quinoa
AUR62007592 Chenopodium quinoa
AUR62029587 Chenopodium quinoa
AUR62034850 Chenopodium quinoa
AUR62038855 Chenopodium quinoa
BcaB01g00789 Brassica carinata
BcaB02g09755 Brassica carinata
BcaB02g10022 Brassica carinata
BcaB02g11386 Brassica carinata
BcaB03g12909 Brassica carinata
BcaB04g17539 Brassica carinata
BcaB04g19922 Brassica carinata
BcaB05g22996 Brassica carinata
BcaB07g29665 Brassica carinata
BcaB07g29690 Brassica carinata
BcaB07g31975 Brassica carinata
BcaB07g31977 Brassica carinata
BcaC01g06929 Brassica carinata
BcaC03g18209 Brassica carinata
BcaC03g18413 Brassica carinata
BcaC03g18419 Brassica carinata
BcaC04g23334 Brassica carinata
BcaC05g25832 Brassica carinata
BcaC05g25833 Brassica carinata
BcaC05g27632 Brassica carinata
BcaC06g34710 Brassica carinata
BcaC07g37229 Brassica carinata
BcaC07g39350 Brassica carinata
BolC2t12347H Brassica oleracea
BolC2t12551H Brassica oleracea
BolC3t18547H Brassica oleracea
BolC5t30514H Brassica oleracea
BolC5t32342H Brassica oleracea
BolC7t43063H Brassica oleracea
BolC8t47497H Brassica oleracea
BolC8t49575H Brassica oleracea
BolC8t49998H Brassica oleracea
BolC9t53850H Brassica oleracea
BraA02t09203Z Brassica rapa
BraA02t09369Z Brassica rapa
BraA05t21065Z Brassica rapa
BraA06t24684Z Brassica rapa
BraA06t24986Z Brassica rapa
BraA06t25965Z Brassica rapa
BraA07t29467Z Brassica rapa
BraA08t32588Z Brassica rapa
BraA08t34911Z Brassica rapa
BraA09t36480Z Brassica rapa
C02p62760 Brassica napus
C02p64920 Brassica napus
C03p62930 Brassica napus
C05p18060 Brassica napus
C05p36190 Brassica napus
C07p25400 Brassica napus
C08p06500 Brassica napus
C08p19520 Brassica napus
C08p23680 Brassica napus
C09p09380 Brassica napus
CAN.G1226.40 Capsicum annuum
CAN.G358.57 Capsicum annuum
CAN.G53.1 Capsicum annuum
CAN.G861.3 Capsicum annuum
CANSAT01G3158 Cannabis sativa
CANSAT80G0056 Cannabis sativa
CANSAT80G2765 Cannabis sativa
CARHR020130 Cardamine hirsuta
CARHR036810 Cardamine hirsuta
CARHR157440 Cardamine hirsuta
CARHR277360 Cardamine hirsuta
CARHR281240 Cardamine hirsuta
Carub.0001s1913 Capsella rubella
Carub.0001s3603 Capsella rubella
Carub.0005s1482 Capsella rubella
Carub.0008s2421 Capsella rubella
Carub.0008s2802 Capsella rubella
Ca_15503_v3 Cicer arietinum L.
Ca_17560_v3 Cicer arietinum L.
Ca_24871_v3 Cicer arietinum L.
CBR_g370 Chara braunii
CBR_g49 Chara braunii
Cc04_g09910 Coffea canephora
Cc07_g09790 Coffea canephora
Cc10_g02640 Coffea canephora
CDE01G0255 Ceratophyllum demersum
CDE01G0327 Ceratophyllum demersum
CDE02G1476 Ceratophyllum demersum
CDE02G1494 Ceratophyllum demersum
CDE08G1010 Ceratophyllum demersum
Cfa004336 Carpinus fangiana
Cfa018179 Carpinus fangiana
Cfa018777 Carpinus fangiana
Ciclev10002155m.g Citrus clementina
Ciclev10026267m.g Citrus clementina
Ciclev10032492m.g Citrus clementina
CiPaw.02G019800 Carya illinoinensis
CiPaw.11G005700 Carya illinoinensis
CiPaw.12G044400 Carya illinoinensis
CiPaw.15G081400 Carya illinoinensis
CiPaw.16G060200 Carya illinoinensis
ClCG06G018010 Citrullus lanatus
ClCG08G014880 Citrullus lanatus
COL.COLO4_07123 Corchorus olitorius
COL.COLO4_22045 Corchorus olitorius
COL.COLO4_26282 Corchorus olitorius
Cpa.g.c45133 Carica papaya
Cpa.g.sc123.48 Carica papaya
Cpa.g.sc13.93 Carica papaya
Cpa.g.sc6.143 Carica papaya
Cre06.g293850 Chlamydomonas reinhardtii
Cre09.g415850 Chlamydomonas reinhardtii
Cre12.g516450 Chlamydomonas reinhardtii
CsaV3_1G000460 Cucumis sativus L.
CsaV3_2G028880 Cucumis sativus L.
CsaV3_4G005550 Cucumis sativus L.
CSS0025908 Camellia sinensis var. sinensis
CSS0030294 Camellia sinensis var. sinensis
CSS0031338 Camellia sinensis var. sinensis
DCAR_016383 Daucus carota
DCAR_016384 Daucus carota
DCAR_017304 Daucus carota
DCAR_022476 Daucus carota
DCAR_025955 Daucus carota
Dinv11188 Davidia involucrata
Dinv13500 Davidia involucrata
Dinv23163 Davidia involucrata
Dinv36103 Davidia involucrata
Dinv39437 Davidia involucrata
Dinv40004 Davidia involucrata
Duzib041G0789 Durio zibethinus
Duzib068G0128 Durio zibethinus
Duzib084G1430 Durio zibethinus
Duzib093G1077 Durio zibethinus
Duzib116G0676 Durio zibethinus
Duzib147G0901 Durio zibethinus
Duzib187G0265 Durio zibethinus
Duzib205G0217 Durio zibethinus
Duzib264G0075 Durio zibethinus
ECA232G3031 Erigeron canadensis
ECA232G4911 Erigeron canadensis
ECA246G0092 Erigeron canadensis
EL10Ac5g11393 Beta vulgaris
EL10Ac6g15534 Beta vulgaris
Eucgr.F01883 Eucalyptus grandis
Eucgr.I02417 Eucalyptus grandis
Eucgr.K02710 Eucalyptus grandis
FAN04G1421 Fragaria x ananassa
FAN08G2661 Fragaria x ananassa
FAN13G3056 Fragaria x ananassa
FAN15G2623 Fragaria x ananassa
FAN18G0520 Fragaria x ananassa
FAN19G1029 Fragaria x ananassa
FAN20G1946 Fragaria x ananassa
FAN23G1782 Fragaria x ananassa
FAN23G2953 Fragaria x ananassa
FAN26G0585 Fragaria x ananassa
FAN26G1751 Fragaria x ananassa
FAN27G3394 Fragaria x ananassa
FAN28G1264 Fragaria x ananassa
FAN28G2572 Fragaria x ananassa
FvH4_1g12950 Fragaria vesca
FvH4_1g12951 Fragaria vesca
FvH4_1g12960 Fragaria vesca
FvH4_1g13821 Fragaria vesca
FvH4_1g13851 Fragaria vesca
FvH4_2g39590 Fragaria vesca
FvH4_5g08540 Fragaria vesca
Glyma.01G172300 Glycine max
Glyma.04G030700 Glycine max
Glyma.04G030800 Glycine max
Glyma.05G204300 Glycine max
Glyma.06G030700 Glycine max
Glyma.08G011600 Glycine max
Glyma.11G070900 Glycine max
Gohir.A01G114700 Gossypium hirsutum
Gohir.A02G166800 Gossypium hirsutum
Gohir.A07G050200 Gossypium hirsutum
Gohir.A11G183200 Gossypium hirsutum
Gohir.A12G190200 Gossypium hirsutum
Gohir.D01G103100 Gossypium hirsutum
Gohir.D03G013200 Gossypium hirsutum
Gohir.D07G054600 Gossypium hirsutum
Gohir.D11G189700 Gossypium hirsutum
Gohir.D12G192500 Gossypium hirsutum
Gorai.001G057800 Gossypium raimondii
Gorai.002G126800 Gossypium raimondii
Gorai.003G013500 Gossypium raimondii
Gorai.007G201900 Gossypium raimondii
Gorai.008G207000 Gossypium raimondii
GSVIVG01009735001 Vitis vinifera
GSVIVG01018929001 Vitis vinifera
HanXRQChr09g0269011 Helianthus annuus
HanXRQChr15g0482281 Helianthus annuus
HanXRQChr16g0498051 Helianthus annuus
HanXRQChr16g0501531 Helianthus annuus
HanXRQChr16g0530641 Helianthus annuus
Haze_07161 Corylus avellana
Haze_17938 Corylus avellana
Hma1.2p1_0014F.1_g009270 Hydrangea macrophylla
HPP92_000047 Vanilla planifolia
HPP92_008069 Vanilla planifolia
Hund02450 Selenicereus undatus
Hund10146 Selenicereus undatus
Hund13993 Selenicereus undatus
Hund16443 Selenicereus undatus
Lalb_Chr05g0212701 Lupinus albus
Lalb_Chr07g0183511 Lupinus albus
Lalb_Chr08g0245921 Lupinus albus
Lalb_Chr12g0202261 Lupinus albus
Lalb_Chr16g0377731 Lupinus albus
Lalb_Chr23g0266551 Lupinus albus
Lj1g0023130 Lotus japonicus
Lj2A456G49 Lonicera japonica
Lj2g0007709 Lotus japonicus
Lj4A204T65 Lonicera japonica
Lj4A37T66 Lonicera japonica
Lj4g0011684 Lotus japonicus
Lj4g0014476 Lotus japonicus
Lj5C95T4 Lonicera japonica
Lj9C480T5 Lonicera japonica
Lj9C480T6 Lonicera japonica
Lsat_1_v5_gn_3_76001 Lactuca sativa
Lsat_1_v5_gn_4_81500 Lactuca sativa
Lsat_1_v5_gn_5_27781 Lactuca sativa
Manes.05G157600 Manihot esculenta
Manes.06G120700 Manihot esculenta
Manes.08G007100 Manihot esculenta
Manes.14G049700 Manihot esculenta
Manes.18G022700 Manihot esculenta
Mapoly0005s0235 Marchantia polymorpha
Mapoly0036s0116 Marchantia polymorpha
MBI07_g11279_MAGBIO Magnolia biondii
MBI16_g07723_MAGBIO Magnolia biondii
MCO04G217 Micromonas commoda
MCO13G049 Micromonas commoda
MD02G1144100 Malus domestica
MD06G1140000 Malus domestica
MD08G1029100 Malus domestica
MD14G1155400 Malus domestica
MD15G1024600 Malus domestica
MD15G1257700 Malus domestica
Medtr1g022405 Medicago truncatula
Medtr3g112020 Medicago truncatula
Medtr5g020850 Medicago truncatula
Medtr8g096820 Medicago truncatula
MELO3C010958.2 Cucumis melo
MELO3C016394.2 Cucumis melo
MELO3C026198.2 Cucumis melo
Migut.H02532 Erythranthe guttata
Migut.I00546 Erythranthe guttata
Migut.J00609 Erythranthe guttata
MSTRG.11270 Avicennia marina
MSTRG.1267 Avicennia marina
MSTRG.23241 Avicennia marina
MSTRG.24283 Avicennia marina
MSTRG.9332 Avicennia marina
Nitab4.5_0000136g0280 Nicotiana tabacum
Nitab4.5_0000178g0310 Nicotiana tabacum
Nitab4.5_0003265g0140 Nicotiana tabacum
Nitab4.5_0003367g0100 Nicotiana tabacum
Nitab4.5_0007490g0020 Nicotiana tabacum
Nitab4.5_0008031g0030 Nicotiana tabacum
Nitab4.5_0009165g0020 Nicotiana tabacum
Nitab4.5_0010179g0040 Nicotiana tabacum
Nn1g04934 Nelumbo nucifera
Nn2g12278 Nelumbo nucifera
Nn3g16419 Nelumbo nucifera
Nn4g22278 Nelumbo nucifera
Oeu002829.2 Olea europaea
Oeu012313.1 Olea europaea
Oeu018214.1 Olea europaea
Oeu041358.1 Olea europaea
Oeu061145.1 Olea europaea
Os01g0283100 Oryza sativa ssp. japonica
Os02g0508000 Oryza sativa ssp. japonica
Os07g0642900 Oryza sativa ssp. japonica
Os12g0169700 Oryza sativa ssp. japonica
Peaxi162Scf00008g03415 Petunia axillaris
Peaxi162Scf00089g00122 Petunia axillaris
Peaxi162Scf00140g00015 Petunia axillaris
Peaxi162Scf00366g00626 Petunia axillaris
PGR031G3096 Punica granatum
PGR044G1915 Punica granatum
PGR083G1624 Punica granatum
PGSC0003DMG400003515 Solanum tuberosum
PGSC0003DMG400003692 Solanum tuberosum
PGSC0003DMG400015489 Solanum tuberosum
PGSC0003DMG402015205 Solanum tuberosum
Phvul.002G032600 Phaseolus vulgaris
Phvul.002G286100 Phaseolus vulgaris
Phvul.009G059200 Phaseolus vulgaris
Phvul.009G059400 Phaseolus vulgaris
Potri.002G034100 Populus trichocarpa
Potri.005G120800 Populus trichocarpa
Potri.005G229000 Populus trichocarpa
Potri.012G100400 Populus trichocarpa
Potri.015G098600 Populus trichocarpa
Pp3c11_22520 Physcomitrium patens
Pp3c1_7500 Physcomitrium patens
Pp3c2_32980 Physcomitrium patens
Pp3c4_16870 Physcomitrium patens
Pp3c7_19540 Physcomitrium patens
Pp3c7_4200 Physcomitrium patens
PRCOL_00000018 Prasinoderma coloniale
PRCOL_00006549 Prasinoderma coloniale
Prupe.1G376900 Prunus persica
Prupe.5G149300 Prunus persica
Prupe.7G157500 Prunus persica
Psat2g157920 Pisum sativum
Psat5g016600 Pisum sativum
Psat6g008320 Pisum sativum
Psat7g036400 Pisum sativum
Psat7g190360 Pisum sativum
Psat7g190480 Pisum sativum
PSO210G3877 Papaver somniferum
PSO541G3890 Papaver somniferum
PSO675G3607 Papaver somniferum
PSO731G0042 Papaver somniferum
PSO764G0138 Papaver somniferum
PSO832G0025 Papaver somniferum
QL02p009240 Quercus lobata
QL10p002591 Quercus lobata
RcHm_v2.0_Chr2g0101001 Rosa chinensis
RcHm_v2.0_Chr5g0071351 Rosa chinensis
RcHm_v2.0_Chr6g0301331 Rosa chinensis
RcHm_v2.0_Chr7g0189861 Rosa chinensis
Rhsim08G0119000 Rhododendron simsii
Rhsim08G0119100 Rhododendron simsii
Rhsim12G0176300 Rhododendron simsii
Sabra02G0027400 Salix brachista
Sabra05G0099600 Salix brachista
Sabra05G0176900 Salix brachista
Sabra12G0059700 Salix brachista
Sabra15G0119300 Salix brachista
SalBow5G4576 Salvia bowleyana
SalBow7G2462 Salvia bowleyana
SalBow8G5021 Salvia bowleyana
Sc02g0005940 Simmondsia chinensis
Sc07g0000820 Simmondsia chinensis
Sc10g0010510 Simmondsia chinensis
Sc15g0007060 Simmondsia chinensis
Sed0007090 Sechium edule
Sed0016105 Sechium edule
Sed0020313 Sechium edule
Sed0021621 Sechium edule
SEGI_03681 Sequoiadendron giganteum
SEGI_10350 Sequoiadendron giganteum
SEGI_14578 Sequoiadendron giganteum
SEGI_16776 Sequoiadendron giganteum
SEGI_30737 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05814 Striga asiatica
SGA_v2.0_scaffold12G06290 Striga asiatica
SGA_v2.0_scaffold12G06297 Striga asiatica
SGA_v2.0_scaffold201G41401 Striga asiatica
SGA_v2.0_scaffold40G15549 Striga asiatica
SGA_v2.0_scaffold51G18831 Striga asiatica
SHI08141 Sapria himalayana
SMO118G0367 Selaginella moellendorffii
SMO367G1044 Selaginella moellendorffii
Solyc02g062600.3 Solanum lycopersicum
Solyc02g085040.3 Solanum lycopersicum
Solyc03g019720.4 Solanum lycopersicum
Solyc04g080570.3 Solanum lycopersicum
Sopen02g013620 Solanum pennellii
Sopen02g029740 Solanum pennellii
Sopen03g029900 Solanum pennellii
Sopen04g009230 Solanum pennellii
Sopen04g034160 Solanum pennellii
Sp1g17430 Schrenkiella parvula
Sp1g34390 Schrenkiella parvula
Sp2g26590 Schrenkiella parvula
Sp2g30220 Schrenkiella parvula
Sp5g13330 Schrenkiella parvula
TAR374G0437 Trochodendron aralioides
TAR376G0683 Trochodendron aralioides
TAR381G0318 Trochodendron aralioides
TAR622G0784 Trochodendron aralioides
TAR625G0384 Trochodendron aralioides
TAR628G0516 Trochodendron aralioides
THA.LOC104798942 Tarenaya hassleriana
THA.LOC104801917 Tarenaya hassleriana
THA.LOC104812560 Tarenaya hassleriana
THA.LOC104821297 Tarenaya hassleriana
Thecc.01G032100 Theobroma cacao
Thecc.03G131300 Theobroma cacao
Thecc.08G029900 Theobroma cacao
Thhalv10004794m.g Eutrema salsugineum
Thhalv10004812m.g Eutrema salsugineum
Thhalv10008724m.g Eutrema salsugineum
Thhalv10010651m.g Eutrema salsugineum
Thhalv10011707m.g Eutrema salsugineum
TPR.G12817 Trifolium pratense
TPR.G20185 Trifolium pratense
TPR.G20501 Trifolium pratense
TPR.G21516 Trifolium pratense
TPR.G2371 Trifolium pratense
TPR.G8456 Trifolium pratense
TWI12G0008 Tripterygium wilfordii
TWI14G1281 Tripterygium wilfordii
TWI23G0950 Tripterygium wilfordii
TWI36G1345 Tripterygium wilfordii
TWI56G0613 Tripterygium wilfordii
unitig_0.g1084 Utricularia gibba
unitig_61.g26210 Utricularia gibba
unitig_748.g7752 Utricularia gibba
vmacro16729 Vaccinium macrocarpon
vmacro17817 Vaccinium macrocarpon
vmacro17818 Vaccinium macrocarpon
VMungo0251G2091 Vigna mungo
VMungo0464G0309 Vigna mungo
VMungo1215G1391 Vigna mungo
VMungo1215G1466 Vigna mungo
VMungo1309G2002 Vigna mungo
Zm00001eb129380 Zea mays
Zm00001eb180920 Zea mays
Zm00001eb241770 Zea mays
Zm00001eb329150 Zea mays
Zm00001eb332510 Zea mays

User provided reference genes

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