Gene: AT3G48680
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G48680
- Transcript Identifier AT3G48680.1
- Gene Type Coding gene
- Location Chr3 : 18035107-18036773 : positive
Gene Family Information
- ID HOM05D001321
- #Genes/#Species 475/100
- Phylogenetic origin
- ID ORTHO05D005090
- #Genes/#Species 164/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G48680.1
- symbol GAMMA CAL2
- Alias AtCAL2
- uniprot Q9SMN1
Descriptions
- Description gamma carbonic anhydrase-like 2
- Computational description gamma carbonic anhydrase-like 2 (GAMMA CAL2); FUNCTIONS IN: transferase activity; INVOLVED IN: photorespiration; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase like 1 (TAIR:AT5G63510.1); Has 6263 Blast hits to 6236 proteins in 1756 species: Archae - 151; Bacteria - 4130; Metazoa - 15; Fungi - 10; Plants - 165; Viruses - 0; Other Eukaryotes - 1792 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010228 | IGI | Gene Ontology | vegetative to reproductive phase transition of meristem | 1 |
| GO:0009737 | IGI | Gene Ontology | response to abscisic acid | 1 |
| GO:0009651 | IGI | Gene Ontology | response to salt stress | 1 |
| GO:0009853 | TAS | Gene Ontology | photorespiration | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0005515 | IPI | Gene Ontology | protein binding | 3 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005747 | IDA, HDA | Gene Ontology | mitochondrial respiratory chain complex I | 4 5 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005739 | IEA | GOA Database | mitochondrion | |
| GO:0005739 | IDA, HDA | Gene Ontology | mitochondrion | 6 7 |
| GO:0005774 | IDA | GOA Database | vacuolar membrane | |
| GO:0031966 | IEA | GOA Database | mitochondrial membrane | |
| GO:0031966 | IDA | Gene Ontology | mitochondrial membrane | 2 |
| GO:0005829 | HDA | Gene Ontology | cytosol | 8 |
| GO:0009507 | ISM | Gene Ontology | chloroplast | |
| GO:0000325 | HDA | Gene Ontology | plant-type vacuole | 9 |
| GO:0045271 | IDA | Gene Ontology | respiratory chain complex I | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011004 | Trimeric LpxA-like superfamily |
| Mapman id | Description |
|---|---|
| 2.4.1.4.11 | Cellular respiration.oxidative phosphorylation.NADH dehydrogenase complex.non-core modules.component CAL |