Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p37700 Brassica napus
A03p43960 Brassica napus
A06p38920 Brassica napus
A06p38930 Brassica napus
A07p07390 Brassica napus
A09p04610 Brassica napus
A09p13000 Brassica napus
Aa31LG1G890 Aethionema arabicum
Aa31LG5G17670 Aethionema arabicum
Aa31LG9G15560 Aethionema arabicum
Aa31LG9G4730 Aethionema arabicum
Aa31sc1613G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3693 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1121 Anthoceros agrestis
Actinidia09480 Actinidia chinensis
Actinidia18147 Actinidia chinensis
Actinidia30075 Actinidia chinensis
Actinidia33193 Actinidia chinensis
Actinidia35868 Actinidia chinensis
Actinidia37009 Actinidia chinensis
Actinidia37596 Actinidia chinensis
Ah.07g201260 Amaranthus hybridus
Ah.15g093910 Amaranthus hybridus
AL3G18350 Arabidopsis lyrata
AL3G40600 Arabidopsis lyrata
AL8G21870 Arabidopsis lyrata
AL8G21880 Arabidopsis lyrata
AL9U10870 Arabidopsis lyrata
Aqoxy2G03879 Aquilegia oxysepala
Aqoxy3G02614 Aquilegia oxysepala
Aqoxy5G00049 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3EKV6C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D8UPNS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QF6RLP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RK9T7W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YIEM7C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z3ML6G Arachis hypogaea
AT3G07110 Arabidopsis thaliana
AT3G24830 Arabidopsis thaliana
AT4G13170 Arabidopsis thaliana
AT5G48760 Arabidopsis thaliana
AT5G48790 Arabidopsis thaliana
ATR0807G183 Amborella trichopoda
ATR0829G072 Amborella trichopoda
ATR1145G102 Amborella trichopoda
Atru.chr4.1712 Acer truncatum
Atru.chr4.71 Acer truncatum
Atru.chr5.1835 Acer truncatum
Atru.chr5.2086 Acer truncatum
Atru.chr6.1547 Acer truncatum
AUR62001883 Chenopodium quinoa
AUR62006520 Chenopodium quinoa
AUR62007400 Chenopodium quinoa
AUR62009679 Chenopodium quinoa
AUR62036500 Chenopodium quinoa
AUR62037743 Chenopodium quinoa
BcaB06g26700 Brassica carinata
BcaB07g30042 Brassica carinata
BcaB08g34427 Brassica carinata
BcaC01g03252 Brassica carinata
BcaC03g17672 Brassica carinata
BcaC04g22777 Brassica carinata
BcaC04g23763 Brassica carinata
BcaC06g30758 Brassica carinata
BcaC06g30759 Brassica carinata
BcaC06g30760 Brassica carinata
BcaC06g35762 Brassica carinata
BolC2t11747H Brassica oleracea
BolC3t17717H Brassica oleracea
BolC7t41588H Brassica oleracea
BolC7t44460H Brassica oleracea
BolC9t53421H Brassica oleracea
BolC9t54447H Brassica oleracea
BraA02t08752Z Brassica rapa
BraA03t13527Z Brassica rapa
BraA06t26806Z Brassica rapa
BraA06t26807Z Brassica rapa
BraA07t28526Z Brassica rapa
BraA09t36097Z Brassica rapa
BraA09t36945Z Brassica rapa
C02p56790 Brassica napus
C03p54310 Brassica napus
C07p11160 Brassica napus
C07p39400 Brassica napus
C07p39410 Brassica napus
C09p04930 Brassica napus
C09p15400 Brassica napus
CAN.G500.6 Capsicum annuum
CAN.G765.20 Capsicum annuum
CAN.G767.44 Capsicum annuum
CAN.G773.2 Capsicum annuum
CANSAT01G3150 Cannabis sativa
CANSAT25G2402 Cannabis sativa
CANSAT78G0883 Cannabis sativa
CARHR081710 Cardamine hirsuta
CARHR101180 Cardamine hirsuta
CARHR182950 Cardamine hirsuta
Carub.0003s0663 Capsella rubella
Carub.0003s2524 Capsella rubella
Carub.0005s0464 Capsella rubella
Carub.0007s2953 Capsella rubella
Carub.0008s0851 Capsella rubella
Carub.0008s0852 Capsella rubella
Ca_13396_v3 Cicer arietinum L.
Ca_13401_v3 Cicer arietinum L.
Ca_25144_v3 Cicer arietinum L.
Ca_29828_v3 Cicer arietinum L.
CBR_g18855 Chara braunii
CBR_g49988 Chara braunii
Cc00_g19820 Coffea canephora
Cc00_g24190 Coffea canephora
Cc01_g17000 Coffea canephora
Cc03_g07750 Coffea canephora
Cc06_g21300 Coffea canephora
CDE02G0540 Ceratophyllum demersum
CDE02G1401 Ceratophyllum demersum
CDE04G2144 Ceratophyllum demersum
CDE07G0999 Ceratophyllum demersum
CDE08G0449 Ceratophyllum demersum
CDE09G0538 Ceratophyllum demersum
Cfa002573 Carpinus fangiana
Cfa012569 Carpinus fangiana
Cfa014920 Carpinus fangiana
Ciclev10005900m.g Citrus clementina
Ciclev10023466m.g Citrus clementina
CiPaw.01G122100 Carya illinoinensis
CiPaw.02G066600 Carya illinoinensis
CiPaw.03G149100 Carya illinoinensis
CiPaw.12G070700 Carya illinoinensis
ClCG05G003340 Citrullus lanatus
ClCG06G007730 Citrullus lanatus
ClCG10G001120 Citrullus lanatus
COL.COLO4_09875 Corchorus olitorius
COL.COLO4_09876 Corchorus olitorius
COL.COLO4_09877 Corchorus olitorius
COL.COLO4_10272 Corchorus olitorius
COL.COLO4_15931 Corchorus olitorius
COL.COLO4_22985 Corchorus olitorius
COL.COLO4_27340 Corchorus olitorius
COL.COLO4_37136 Corchorus olitorius
Cpa.g.sc138.3 Carica papaya
Cpa.g.sc24.66 Carica papaya
Cpa.g.sc60.98 Carica papaya
Cpa.g.sc63.27 Carica papaya
Cpa.g.sc8.152 Carica papaya
Cpa.g.sc8.153 Carica papaya
Cre04.g212500 Chlamydomonas reinhardtii
Cre12.g532550 Chlamydomonas reinhardtii
CsaV3_1G042940 Cucumis sativus L.
CsaV3_2G011490 Cucumis sativus L.
CsaV3_3G001140 Cucumis sativus L.
CsaV3_3G011000 Cucumis sativus L.
CSS0010822 Camellia sinensis var. sinensis
CSS0026211 Camellia sinensis var. sinensis
CSS0027433 Camellia sinensis var. sinensis
DCAR_012643 Daucus carota
DCAR_018573 Daucus carota
Dinv15842 Davidia involucrata
Dinv19201 Davidia involucrata
Dinv29579 Davidia involucrata
Dinv29590 Davidia involucrata
Dinv38241 Davidia involucrata
Duzib084G0831 Durio zibethinus
Duzib133G1501 Durio zibethinus
Duzib138G1143 Durio zibethinus
Duzib151G0168 Durio zibethinus
Duzib211G0200 Durio zibethinus
ECA233G0844 Erigeron canadensis
ECA236G3330 Erigeron canadensis
ECA248G0487 Erigeron canadensis
EL10Ac5g11946 Beta vulgaris
EL10Ac7g17840 Beta vulgaris
Eucgr.E01249 Eucalyptus grandis
Eucgr.H00057 Eucalyptus grandis
Eucgr.H00799 Eucalyptus grandis
Eucgr.H02787 Eucalyptus grandis
FAN04G3094 Fragaria x ananassa
FAN07G2097 Fragaria x ananassa
FAN07G2553 Fragaria x ananassa
FAN08G1241 Fragaria x ananassa
FAN12G1961 Fragaria x ananassa
FAN17G0181 Fragaria x ananassa
FAN17G1105 Fragaria x ananassa
FAN18G3541 Fragaria x ananassa
FAN18G4185 Fragaria x ananassa
FAN19G0263 Fragaria x ananassa
FAN19G2672 Fragaria x ananassa
FAN22G0999 Fragaria x ananassa
FvH4_1g23280 Fragaria vesca
FvH4_1g23310 Fragaria vesca
FvH4_4g15860 Fragaria vesca
FvH4_5g23760 Fragaria vesca
Glyma.01G147700 Glycine max
Glyma.08G353900 Glycine max
Glyma.08G354000 Glycine max
Glyma.09G024000 Glycine max
Glyma.09G212000 Glycine max
Glyma.12G106300 Glycine max
Glyma.15G130000 Glycine max
Glyma.16G092800 Glycine max
Glyma.20G094800 Glycine max
Gohir.A02G025701 Gossypium hirsutum
Gohir.A02G025800 Gossypium hirsutum
Gohir.A02G026101 Gossypium hirsutum
Gohir.A03G094200 Gossypium hirsutum
Gohir.A07G156500 Gossypium hirsutum
Gohir.A08G047000 Gossypium hirsutum
Gohir.A08G151200 Gossypium hirsutum
Gohir.A09G204900 Gossypium hirsutum
Gohir.A10G123400 Gossypium hirsutum
Gohir.A11G138100 Gossypium hirsutum
Gohir.D02G032866 Gossypium hirsutum
Gohir.D02G033066 Gossypium hirsutum
Gohir.D02G033132 Gossypium hirsutum
Gohir.D02G123500 Gossypium hirsutum
Gohir.D07G162800 Gossypium hirsutum
Gohir.D08G057400 Gossypium hirsutum
Gohir.D08G172350 Gossypium hirsutum
Gohir.D08G172400 Gossypium hirsutum
Gohir.D09G198600 Gossypium hirsutum
Gohir.D10G142400 Gossypium hirsutum
Gohir.D11G144400 Gossypium hirsutum
Gorai.001G186700 Gossypium raimondii
Gorai.004G058600 Gossypium raimondii
Gorai.004G179700 Gossypium raimondii
Gorai.005G036400 Gossypium raimondii
Gorai.005G036700 Gossypium raimondii
Gorai.005G037000 Gossypium raimondii
Gorai.005G130900 Gossypium raimondii
Gorai.006G222200 Gossypium raimondii
Gorai.007G154600 Gossypium raimondii
Gorai.011G159000 Gossypium raimondii
GSVIVG01018356001 Vitis vinifera
GSVIVG01021080001 Vitis vinifera
GSVIVG01022633001 Vitis vinifera
GSVIVG01028661001 Vitis vinifera
HanXRQChr01g0015151 Helianthus annuus
HanXRQChr04g0108111 Helianthus annuus
HanXRQChr06g0172051 Helianthus annuus
HanXRQChr07g0196451 Helianthus annuus
HanXRQChr08g0226791 Helianthus annuus
HanXRQChr09g0259971 Helianthus annuus
Haze_08097 Corylus avellana
Haze_11604 Corylus avellana
Haze_24804 Corylus avellana
Haze_26223 Corylus avellana
Hma1.2p1_0148F.1_g065970 Hydrangea macrophylla
Hma1.2p1_0187F.1_g082070 Hydrangea macrophylla
Hma1.2p1_0469F.1_g159035 Hydrangea macrophylla
Hma1.2p1_0489F.1_g164020 Hydrangea macrophylla
Hma1.2p1_0612F.1_g189060 Hydrangea macrophylla
Hma1.2p1_0979F.1_g243590 Hydrangea macrophylla
Hma1.2p1_1190F.1_g265410 Hydrangea macrophylla
Hma1.2p1_1382F.1_g279420 Hydrangea macrophylla
Hma1.2p1_1741F.1_g300120 Hydrangea macrophylla
Hma1.2p1_2176F.1_g316150 Hydrangea macrophylla
HPP92_007833 Vanilla planifolia
HPP92_023590 Vanilla planifolia
HPP92_023591 Vanilla planifolia
HPP92_023636 Vanilla planifolia
HPP92_025933 Vanilla planifolia
Hund05558 Selenicereus undatus
Hund11115 Selenicereus undatus
Hund30689 Selenicereus undatus
Hund30690 Selenicereus undatus
Lalb_Chr05g0215521 Lupinus albus
Lalb_Chr07g0194061 Lupinus albus
Lalb_Chr07g0194071 Lupinus albus
Lalb_Chr12g0209721 Lupinus albus
Lalb_Chr13g0291121 Lupinus albus
Lj1A86T17 Lonicera japonica
Lj1g0006086 Lotus japonicus
Lj2A1130T54 Lonicera japonica
Lj2g0015654 Lotus japonicus
Lj3g0014686 Lotus japonicus
Lj3g0018567 Lotus japonicus
Lj6A558G56 Lonicera japonica
Lj6A570T10 Lonicera japonica
Lj8A324T105 Lonicera japonica
Lju2073A0T61 Lonicera japonica
Lsat_1_v5_gn_3_119961 Lactuca sativa
Lsat_1_v5_gn_4_136900 Lactuca sativa
Lsat_1_v5_gn_5_180300 Lactuca sativa
Lsat_1_v5_gn_6_17621 Lactuca sativa
Lsat_1_v5_gn_6_40360 Lactuca sativa
Lsat_1_v5_gn_8_89921 Lactuca sativa
Manes.03G148400 Manihot esculenta
Manes.13G046000 Manihot esculenta
Manes.15G053100 Manihot esculenta
Manes.17G008800 Manihot esculenta
Mapoly0015s0154 Marchantia polymorpha
Mapoly0052s0004 Marchantia polymorpha
Mapoly0054s0044 Marchantia polymorpha
MBI02_g36597_MAGBIO Magnolia biondii
MBI03_g02696_MAGBIO Magnolia biondii
MBI03_g02697_MAGBIO Magnolia biondii
MBI03_g23811_MAGBIO Magnolia biondii
MBI03_g23812_MAGBIO Magnolia biondii
MBI03_g34957_MAGBIO Magnolia biondii
MBI05_g00395_MAGBIO Magnolia biondii
MBI05_g35444_MAGBIO Magnolia biondii
MBI07_g40651_MAGBIO Magnolia biondii
MBI10_g25146_MAGBIO Magnolia biondii
MBI10_g41318_MAGBIO Magnolia biondii
MBI10_g41319_MAGBIO Magnolia biondii
MBI12_g16732_MAGBIO Magnolia biondii
MBI17_g29797_MAGBIO Magnolia biondii
MBI19_g42231_MAGBIO Magnolia biondii
MBI19_g42511_MAGBIO Magnolia biondii
MCO01G046 Micromonas commoda
MCO02G434 Micromonas commoda
MCO12G167 Micromonas commoda
MCO15G307 Micromonas commoda
MD00G1000600 Malus domestica
MD00G1018900 Malus domestica
MD04G1008000 Malus domestica
MD05G1175100 Malus domestica
MD07G1031400 Malus domestica
MD07G1032400 Malus domestica
MD10G1164200 Malus domestica
Medtr1g023590 Medicago truncatula
Medtr5g027220 Medicago truncatula
Medtr5g083790 Medicago truncatula
Medtr7g057770 Medicago truncatula
MELO3C006314.2 Cucumis melo
MELO3C013804.2 Cucumis melo
MELO3C015177.2 Cucumis melo
MELO3C020452.2 Cucumis melo
MELO3C021339.2 Cucumis melo
Migut.E01337 Erythranthe guttata
Migut.G00675 Erythranthe guttata
Migut.N00377 Erythranthe guttata
MSTRG.4221 Avicennia marina
MSTRG.9815 Avicennia marina
Nitab4.5_0000676g0230 Nicotiana tabacum
Nitab4.5_0000850g0020 Nicotiana tabacum
Nitab4.5_0000941g0170 Nicotiana tabacum
Nitab4.5_0001033g0010 Nicotiana tabacum
Nitab4.5_0002260g0210 Nicotiana tabacum
Nitab4.5_0002735g0030 Nicotiana tabacum
Nitab4.5_0003502g0050 Nicotiana tabacum
Nitab4.5_0007838g0010 Nicotiana tabacum
Nn1g04239 Nelumbo nucifera
Nn3g19221 Nelumbo nucifera
Nn4g25129 Nelumbo nucifera
Nn8g40840 Nelumbo nucifera
Oeu006729.1 Olea europaea
Oeu006732.1 Olea europaea
Oeu015951.1 Olea europaea
Oeu016731.1 Olea europaea
Oeu018221.1 Olea europaea
Oeu022368.1 Olea europaea
Oeu038592.1 Olea europaea
Oeu045306.1 Olea europaea
Os02g0129300 Oryza sativa ssp. japonica
Os03g0755625 Oryza sativa ssp. japonica
Os03g0755700 Oryza sativa ssp. japonica
Os03g0756000 Oryza sativa ssp. japonica
Os07g0109500 Oryza sativa ssp. japonica
Os11g0425800 Oryza sativa ssp. japonica
Peaxi162Scf00047g00637 Petunia axillaris
Peaxi162Scf00408g00416 Petunia axillaris
Peaxi162Scf00423g00220 Petunia axillaris
Peaxi162Scf00938g00428 Petunia axillaris
PGR042G3955 Punica granatum
PGR083G1154 Punica granatum
PGR142G1738 Punica granatum
PGSC0003DMG400007707 Solanum tuberosum
PGSC0003DMG400029659 Solanum tuberosum
PGSC0003DMG400046345 Solanum tuberosum
PGSC0003DMG402015759 Solanum tuberosum
Phvul.002G132200 Phaseolus vulgaris
Phvul.006G128500 Phaseolus vulgaris
Phvul.008G125900 Phaseolus vulgaris
Potri.001G314500 Populus trichocarpa
Potri.002G242600 Populus trichocarpa
Potri.003G100300 Populus trichocarpa
Potri.017G054600 Populus trichocarpa
Pp3c11_17280 Physcomitrium patens
Pp3c12_7180 Physcomitrium patens
Pp3c19_10330 Physcomitrium patens
Pp3c1_15830 Physcomitrium patens
Pp3c2_20550 Physcomitrium patens
Pp3c7_12270 Physcomitrium patens
PRCOL_00004822 Prasinoderma coloniale
PRCOL_00006184 Prasinoderma coloniale
Prupe.1G006700 Prunus persica
Prupe.5G022700 Prunus persica
Prupe.8G202800 Prunus persica
Psat2g141080 Pisum sativum
Psat3g145240 Pisum sativum
Psat3g185120 Pisum sativum
Psat6g004720 Pisum sativum
Psat7g203880 Pisum sativum
Psat7g203960 Pisum sativum
PSO063G6112 Papaver somniferum
PSO170G1970 Papaver somniferum
PSO782G2690 Papaver somniferum
PSO782G3536 Papaver somniferum
QL01p054899 Quercus lobata
QL02p095619 Quercus lobata
QL06p036545 Quercus lobata
QL09p054504 Quercus lobata
QL11p000157 Quercus lobata
QL12p001026 Quercus lobata
RcHm_v2.0_Chr2g0148561 Rosa chinensis
RcHm_v2.0_Chr4g0386461 Rosa chinensis
RcHm_v2.0_Chr4g0415441 Rosa chinensis
RcHm_v2.0_Chr6g0284831 Rosa chinensis
RcHm_v2.0_Chr7g0213081 Rosa chinensis
RcHm_v2.0_Chr7g0213121 Rosa chinensis
RcHm_v2.0_Chr7g0231251 Rosa chinensis
Rhsim02G0056800 Rhododendron simsii
Rhsim07G0137000 Rhododendron simsii
Rhsim13G0045300 Rhododendron simsii
Sabra02G0184900 Salix brachista
Sabra03G0068500 Salix brachista
Sabra16G0199000 Salix brachista
Sabra17G0046400 Salix brachista
SalBow1G6490 Salvia bowleyana
SalBow3G2230 Salvia bowleyana
SalBow8G2085 Salvia bowleyana
Sc07g0008510 Simmondsia chinensis
Sc17g0002320 Simmondsia chinensis
Sc17g0002370 Simmondsia chinensis
Sc24g0003540 Simmondsia chinensis
Sed0009412 Sechium edule
Sed0014021 Sechium edule
Sed0015888 Sechium edule
Sed0021423 Sechium edule
Sed0026920 Sechium edule
SEGI_06738 Sequoiadendron giganteum
SEGI_12758 Sequoiadendron giganteum
SEGI_16157 Sequoiadendron giganteum
SEGI_17008 Sequoiadendron giganteum
SEGI_27262 Sequoiadendron giganteum
SEGI_38399 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31373 Striga asiatica
SGA_v2.0_scaffold114G31798 Striga asiatica
SGA_v2.0_scaffold169G38737 Striga asiatica
SGA_v2.0_scaffold1G00302 Striga asiatica
SGA_v2.0_scaffold216G42385 Striga asiatica
SGA_v2.0_scaffold391G50611 Striga asiatica
SGA_v2.0_scaffold410G51121 Striga asiatica
SGA_v2.0_scaffold417G51239 Striga asiatica
SGA_v2.0_scaffold57G20119 Striga asiatica
SGA_v2.0_scaffold7G04183 Striga asiatica
SMO141G0216 Selaginella moellendorffii
SMO170G0002 Selaginella moellendorffii
SMO356G0697 Selaginella moellendorffii
SMO356G0709 Selaginella moellendorffii
Solyc05g053670.3 Solanum lycopersicum
Solyc08g075990.3 Solanum lycopersicum
Solyc09g091740.4 Solanum lycopersicum
Solyc12g098330.3 Solanum lycopersicum
Sopen05g032170 Solanum pennellii
Sopen08g024630 Solanum pennellii
Sopen09g023280 Solanum pennellii
Sopen09g034630 Solanum pennellii
Sopen12g033110 Solanum pennellii
Sp2g19170 Schrenkiella parvula
Sp2g19180 Schrenkiella parvula
Sp3g06050 Schrenkiella parvula
Sp3g22570 Schrenkiella parvula
SpUn0027_0050 Schrenkiella parvula
TAR362G0915 Trochodendron aralioides
TAR365G0914 Trochodendron aralioides
TAR629G2165 Trochodendron aralioides
TAR633G2016 Trochodendron aralioides
TAR636G2314 Trochodendron aralioides
THA.LOC104802671 Tarenaya hassleriana
THA.LOC104804611 Tarenaya hassleriana
THA.LOC104808786 Tarenaya hassleriana
THA.LOC104812764 Tarenaya hassleriana
THA.LOC104818959 Tarenaya hassleriana
THA.LOC104822501 Tarenaya hassleriana
Thecc.01G225300 Theobroma cacao
Thecc.03G315000 Theobroma cacao
Thecc.04G205000 Theobroma cacao
Thhalv10002667m.g Eutrema salsugineum
Thhalv10004626m.g Eutrema salsugineum
Thhalv10004924m.g Eutrema salsugineum
Thhalv10021532m.g Eutrema salsugineum
Thhalv10023853m.g Eutrema salsugineum
TPR.G17003 Trifolium pratense
TPR.G26404 Trifolium pratense
TPR.G27428 Trifolium pratense
TPR.G29137 Trifolium pratense
TWI18G0268 Tripterygium wilfordii
TWI36G0917 Tripterygium wilfordii
TWI75G1766 Tripterygium wilfordii
unitig_26.g9714 Utricularia gibba
unitig_749.g13773 Utricularia gibba
vmacro02760 Vaccinium macrocarpon
vmacro14221 Vaccinium macrocarpon
vmacro15525 Vaccinium macrocarpon
vmacro22924 Vaccinium macrocarpon
VMungo0540G2166 Vigna mungo
VMungo1215G0366 Vigna mungo
VMungo1383G0838 Vigna mungo
Zm00001eb057690 Zea mays
Zm00001eb208900 Zea mays
Zm00001eb214650 Zea mays

User provided reference genes

Program Settings