Gene: AT3G07110

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G07110
  • Transcript Identifier AT3G07110.1
  • Gene Type Coding gene
  • Location Chr3 : 2252092-2253332 : positive

Gene Family Information

  • ID HOM05D001237
  • #Genes/#Species 503/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G07110.1
  • uniprot Q9SFU1

Descriptions

  • Description Ribosomal protein L13 family protein
  • Computational description Ribosomal protein L13 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13 (InterPro:IPR005822), Ribosomal protein L13, eukaryotic/archaeal (InterPro:IPR005755); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT5G48760.2); Has 2682 Blast hits to 2682 proteins in 901 species: Archae - 297; Bacteria - 971; Metazoa - 344; Fungi - 193; Plants - 326; Viruses - 0; Other Eukaryotes - 551 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation
GO:0017148
IBA
GOA Databasenegative regulation of translation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IBA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
IBA
GOA DatabasemRNA binding
GO:0003729
IDA, HDA
Gene OntologymRNA binding1 2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015934
IEA
GOA Databaselarge ribosomal subunit
GO:0015934
IEA
InterProlarge ribosomal subunit
GO:0005840
IBA
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0022625
IBA
GOA Databasecytosolic large ribosomal subunit
GO:0022625
HDA
Gene Ontologycytosolic large ribosomal subunit3
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005829
HDA
Gene Ontologycytosol4
GO:0009506
HDA
Gene Ontologyplasmodesma5
GO:0022626
HDA
Gene Ontologycytosolic ribosome6
GO:0005730
HDA
Gene Ontologynucleolus7

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036899 Ribosomal protein L13 superfamily
IPR005755 Ribosomal protein L13, eukaryotic/archaeal
IPR005822 Ribosomal protein L13
Mapman id Description
17.1.2.1.14 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL13a