Gene: Pp3c1_15830

General Information

Structural Information

Species Physcomitrium patens
Gene Identifier Pp3c1_15830
Transcript Identifier Pp3c1_15830V3.1
Gene Type Coding gene
Location Chr01 : 11872600-11874584 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001237
#Genes/#Species 503/99
Phylogenetic origin

ID ORTHO05D001827
#Genes/#Species 350/98
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

name Pp3c1_15830V3.1
pacid 32970589
alias Phpat.001G062500
alias Pp1s63_162V6
alias Phypa_183175
uniprot A9SBR7

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0017148	IBA	GOA Database	negative regulation of translation
GO:0006412	IEA	GOA Database	translation
GO:0006412	IEA	InterPro	translation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003729	IBA	GOA Database	mRNA binding
GO:0003735	IBA IEA	GOA Database	structural constituent of ribosome
GO:0003735	IEA	InterPro	structural constituent of ribosome

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0022625	IBA	GOA Database	cytosolic large ribosomal subunit
GO:0042788	ISO	PLAZA Integrative Orthology	polysomal ribosome	AT3G24830
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT3G24830
GO:0022626	ISO	PLAZA Integrative Orthology	cytosolic ribosome	AT3G24830
GO:0009506	ISO	PLAZA Integrative Orthology	plasmodesma	AT3G24830
GO:0005840	IBA IEA	GOA Database	ribosome
GO:0005840	IEA	InterPro	ribosome
GO:0015934	IEA	GOA Database	large ribosomal subunit
GO:0015934	IEA	InterPro	large ribosomal subunit

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR036899	Ribosomal protein L13 superfamily
IPR005822	Ribosomal protein L13
IPR005755	Ribosomal protein L13, eukaryotic/archaeal

Mapman id	Description
17.1.2.1.14	Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL13a