Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23496 Vaccinium macrocarpon HOM05D003614 ORTHO05D004156 0.0e+00 1517.3 770 100.0
Rhsim03G0033800 Rhododendron simsii HOM05D003614 ORTHO05D004156 0.0e+00 1181.0 772 79.9
Rhsim10G0199100 Rhododendron simsii HOM05D003614 ORTHO05D004156 0.0e+00 1110.5 735 79.3
Actinidia39178 Actinidia chinensis HOM05D003614 ORTHO05D004156 0.0e+00 1084.7 744 76.3
CSS0031196 Camellia sinensis var. sinensis HOM05D003614 ORTHO05D004156 6.8e-310 1067.0 776 72.8
Dinv00797 Davidia involucrata HOM05D003614 ORTHO05D004156 2.9e-300 1035.0 786 69.1
Dinv04144 Davidia involucrata HOM05D003614 ORTHO05D004156 3.6e-287 991.5 750 69.2
QL07p006066 Quercus lobata HOM05D003614 ORTHO05D004156 8.4e-268 927.2 761 63.6
QL07p005711 Quercus lobata HOM05D003614 ORTHO05D004156 1.9e-267 926.0 761 63.5
TAR580G0003 Trochodendron aralioides HOM05D003614 ORTHO05D004156 4.3e-264 914.8 726 65.3
Haze_19741 Corylus avellana HOM05D003614 ORTHO05D004156 9.6e-264 913.7 732 64.5
Cfa016733 Carpinus fangiana HOM05D003614 ORTHO05D004156 3.1e-262 908.7 773 62.1
CiPaw.09G043900 Carya illinoinensis HOM05D003614 ORTHO05D004156 1.3e-260 903.3 776 61.1
COL.COLO4_33914 Corchorus olitorius HOM05D003614 ORTHO05D004156 4.9e-260 901.4 716 65.4
TWI74G0330 Tripterygium wilfordii HOM05D003614 ORTHO05D004156 1.8e-257 892.9 776 60.4
MD12G1089700 Malus domestica HOM05D003614 ORTHO05D004156 2.3e-257 892.5 773 61.7
Manes.08G056200 Manihot esculenta HOM05D003614 ORTHO05D004156 1.3e-255 886.7 758 61.7
RcHm_v2.0_Chr2g0124831 Rosa chinensis HOM05D003614 ORTHO05D004156 1.3e-255 886.7 771 60.2
PGSC0003DMG400022532 Solanum tuberosum HOM05D003614 ORTHO05D004156 4.8e-255 884.8 766 59.7
Sabra06G0029800 Salix brachista HOM05D003614 ORTHO05D004156 6.2e-255 884.4 790 60.6
Potri.006G043650 Populus trichocarpa HOM05D003614 ORTHO05D004156 1.4e-254 883.2 792 60.4
CANSAT54G1064 Cannabis sativa HOM05D003614 ORTHO05D004156 1.2e-250 870.2 785 58.2
Oeu008197.1 Olea europaea HOM05D003614 ORTHO05D004156 2.7e-250 869.0 759 61.4
FvH4_6g25070 Fragaria vesca HOM05D003614 ORTHO05D004156 3.7e-247 858.6 773 59.9
FAN14G1287 Fragaria x ananassa HOM05D003614 ORTHO05D004156 1.4e-246 856.7 773 60.3
Ca_02700_v3 Cicer arietinum L. HOM05D003614 ORTHO05D004156 2.6e-245 852.4 762 57.3
Atru.chr1.1276 Acer truncatum HOM05D003614 ORTHO05D004156 3.4e-245 852.0 652 67.2
FAN09G2704 Fragaria x ananassa HOM05D003614 ORTHO05D004156 1.7e-244 849.7 779 59.9
FAN02G3060 Fragaria x ananassa HOM05D003614 ORTHO05D004156 3.8e-244 848.6 773 59.5
Glyma.16G116350 Glycine max HOM05D003614 ORTHO05D004156 6.5e-244 847.8 778 57.6
Glyma.16G222000 Glycine max HOM05D003614 ORTHO05D004156 6.5e-244 847.8 727 59.6
CAN.G1237.32 Capsicum annuum HOM05D003614 ORTHO05D004156 1.1e-243 847.0 773 57.1
Nn1g04314 Nelumbo nucifera HOM05D003614 ORTHO05D004156 4.2e-243 845.1 727 59.4
Sopen03g006270 Solanum pennellii HOM05D003614 ORTHO05D004156 3.6e-242 842.0 766 57.8
Sp6g38700 Schrenkiella parvula HOM05D003614 ORTHO05D004156 1.4e-241 840.1 769 57.0
Thhalv10012522m.g Eutrema salsugineum HOM05D003614 ORTHO05D004156 1.8e-241 839.7 768 58.2
arahy.Tifrunner.gnm1.ann1.MR16VB Arachis hypogaea HOM05D003614 ORTHO05D004156 6.7e-241 837.8 733 58.0
arahy.Tifrunner.gnm1.ann1.P66LNP Arachis hypogaea HOM05D003614 ORTHO05D004156 6.7e-241 837.8 733 58.0
ClCG10G005410 Citrullus lanatus HOM05D003614 ORTHO05D004156 3.3e-240 835.5 771 56.4
PGR142G0250 Punica granatum HOM05D003614 ORTHO05D004156 8.2e-239 830.9 756 57.7
BraA10t45251Z Brassica rapa HOM05D003614 ORTHO05D004156 1.4e-238 830.1 747 59.3
TPR.G13793 Trifolium pratense HOM05D003614 ORTHO05D004156 1.8e-238 829.7 735 57.7
C09p72780 Brassica napus HOM05D003614 ORTHO05D004156 6.9e-238 827.8 770 58.4
BolC9t60016H Brassica oleracea HOM05D003614 ORTHO05D004156 6.9e-238 827.8 770 58.4
ECA248G3258 Erigeron canadensis HOM05D003614 ORTHO05D004156 4.5e-237 825.1 755 58.0
A10p32060 Brassica napus HOM05D003614 ORTHO05D004156 1.4e-235 820.1 747 58.6
MELO3C025378.2 Cucumis melo HOM05D003614 ORTHO05D004156 1.9e-235 819.7 767 55.7
THA.LOC104823214 Tarenaya hassleriana HOM05D003614 ORTHO05D004156 2.5e-235 819.3 769 56.6
CsaV3_3G005150 Cucumis sativus L. HOM05D003614 ORTHO05D004156 4.2e-235 818.5 770 55.5
Aa31LG1G21260 Aethionema arabicum HOM05D003614 ORTHO05D004156 5.5e-235 818.1 774 56.5
Sc13g0001410 Simmondsia chinensis HOM05D003614 ORTHO05D004156 3.6e-234 815.5 770 57.1
Aqoxy5G04186 Aquilegia oxysepala HOM05D003614 ORTHO05D004156 7.9e-234 814.3 743 56.7
Sed0022963 Sechium edule HOM05D003614 ORTHO05D004156 1.0e-233 813.9 753 56.3
MBI14_g19444_MAGBIO Magnolia biondii HOM05D003614 ORTHO05D004156 2.3e-233 812.8 770 54.8
AL6G13670 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 3.3e-232 808.9 769 55.8
BcaC06g32109 Brassica carinata HOM05D003614 ORTHO05D004156 6.3e-231 804.7 748 57.6
DCAR_016966 Daucus carota HOM05D003614 ORTHO05D004156 7.0e-230 801.2 658 62.2
Carub.0006s0300 Capsella rubella HOM05D003614 ORTHO05D004156 1.2e-229 800.4 769 54.6
Psat6g087880 Pisum sativum HOM05D003614 ORTHO05D004156 3.2e-227 792.3 770 54.7
GSVIVG01033568001 Vitis vinifera HOM05D003614 ORTHO05D004156 3.2e-227 792.3 740 58.6
Ah.13g076640 Amaranthus hybridus HOM05D003614 ORTHO05D004156 3.6e-226 788.9 768 55.7
PSO017G5444 Papaver somniferum HOM05D003614 ORTHO05D004156 1.8e-225 786.6 728 55.2
Duzib128G0580 Durio zibethinus HOM05D003614 ORTHO05D004156 6.7e-225 784.6 640 62.0
VMungo0720G1667 Vigna mungo HOM05D003614 ORTHO05D004156 1.1e-224 783.9 752 56.4
Lsat_1_v5_gn_5_158800 Lactuca sativa HOM05D003614 ORTHO05D004156 8.5e-220 767.7 774 54.8
Nitab4.5_0010525g0010 Nicotiana tabacum HOM05D003614 ORTHO05D004156 1.9e-219 766.5 617 62.9
Nitab4.5_0005031g0070 Nicotiana tabacum HOM05D003614 ORTHO05D004156 1.4e-217 760.4 617 62.6
Lj1P1115T19 Lonicera japonica HOM05D003614 ORTHO05D004156 1.3e-215 753.8 595 65.4
SGA_v2.0_scaffold94G28503 Striga asiatica HOM05D003614 ORTHO05D004156 1.1e-214 750.7 733 53.9
ATR0580G046 Amborella trichopoda HOM05D003614 ORTHO05D004156 5.3e-214 748.4 718 53.8
SHI03570 Sapria himalayana HOM05D003614 ORTHO05D004156 4.2e-211 738.8 734 53.8
VMungo0331G0942 Vigna mungo HOM05D003614 ORTHO05D004156 2.3e-201 706.4 777 51.2
EL10Ac3g07183 Beta vulgaris HOM05D003614 ORTHO05D004156 8.9e-201 704.5 618 58.7
Peaxi162Scf00130g01210 Petunia axillaris HOM05D003614 ORTHO05D004156 2.0e-200 703.4 571 63.7
AUR62037179 Chenopodium quinoa HOM05D003614 ORTHO05D004156 4.1e-198 695.7 773 51.1
Prupe.7G047200 Prunus persica HOM05D003614 ORTHO05D004156 9.8e-192 674.5 551 61.5
Lalb_Chr02g0142191 Lupinus albus HOM05D003614 ORTHO05D004156 1.1e-187 661.0 647 55.2
unitig_748.g7231 Utricularia gibba HOM05D003614 ORTHO05D004156 2.5e-179 633.3 600 55.3
Solyc03g033520.2 Solanum lycopersicum HOM05D003614 ORTHO05D004156 1.2e-173 614.4 766 46.2
Cpa.g.sc161.31 Carica papaya HOM05D003614 ORTHO05D004156 1.6e-173 614.0 692 51.3
SEGI_09252 Sequoiadendron giganteum HOM05D003614 ORTHO05D004156 1.1e-171 607.8 773 42.9
AT5G04050 Arabidopsis thaliana HOM05D003614 ORTHO05D004156 2.0e-168 597.0 583 57.3
Zm00001eb274760 Zea mays HOM05D003614 ORTHO05D004156 2.6e-168 596.7 629 51.4
QL03p003473 Quercus lobata HOM05D003614 ORTHO05D004156 9.3e-166 588.2 592 53.7
QL07p006078 Quercus lobata HOM05D003614 ORTHO05D004156 6.0e-165 585.5 441 67.1
HanXRQChr13g0395821 Helianthus annuus HOM05D003614 ORTHO05D004156 4.8e-154 549.3 733 46.5
AUR62026155 Chenopodium quinoa HOM05D003614 ORTHO05D004156 4.5e-152 542.7 536 52.8
HPP92_012753 Vanilla planifolia HOM05D003614 ORTHO05D004156 5.9e-128 462.6 572 45.5
QL07p006290 Quercus lobata HOM05D003614 ORTHO05D004156 9.7e-115 418.7 623 40.0
QL03p003469 Quercus lobata HOM05D003614 ORTHO05D004156 1.7e-95 354.8 265 64.9
QL03p003467 Quercus lobata HOM05D003614 ORTHO05D004156 2.0e-88 331.3 274 62.8
VMungo1127G0235 Vigna mungo HOM05D003614 ORTHO05D004156 1.6e-80 305.1 351 50.7
QL11p043133 Quercus lobata HOM05D003614 ORTHO05D004156 1.2e-77 295.4 322 51.6
QL11p043104 Quercus lobata HOM05D003614 ORTHO05D004156 5.4e-73 280.0 340 48.2
Os06g0659200 Oryza sativa ssp. japonica HOM05D003614 ORTHO05D004156 4.9e-58 230.3 157 67.5
SEGI_08289 Sequoiadendron giganteum HOM05D003614 ORTHO05D004156 1.4e-57 228.8 757 26.2
DCAR_014331 Daucus carota HOM05D003614 ORTHO05D004156 1.9e-54 218.4 799 25.3
Cfa002904 Carpinus fangiana HOM05D003614 ORTHO05D004156 5.6e-54 216.9 796 26.0
Haze_25257 Corylus avellana HOM05D003614 ORTHO05D004156 5.6e-54 216.9 765 26.9
CANSAT11G2476 Cannabis sativa HOM05D003614 ORTHO05D004156 9.6e-54 216.1 757 26.8
Sabra05G0053000 Salix brachista HOM05D003614 ORTHO05D004156 1.6e-53 215.3 732 26.9
HanXRQChr17g0536801 Helianthus annuus HOM05D003614 ORTHO05D004156 4.7e-53 213.8 750 27.1
Potri.005G063750 Populus trichocarpa HOM05D003614 ORTHO05D004156 1.1e-52 212.6 732 26.9
Solyc09g010285.1 Solanum lycopersicum HOM05D003614 ORTHO05D004156 1.4e-52 212.2 748 26.6
QL10p043434 Quercus lobata HOM05D003614 ORTHO05D004156 5.2e-52 210.3 769 25.5
PSO017G0346 Papaver somniferum HOM05D003614 ORTHO05D004156 1.2e-51 209.1 761 26.3
Sopen09g004990 Solanum pennellii HOM05D003614 ORTHO05D004156 1.5e-51 208.8 748 26.5
PGSC0003DMG400008935 Solanum tuberosum HOM05D003614 ORTHO05D004156 1.5e-51 208.8 757 26.2
PSO017G1060 Papaver somniferum HOM05D003614 ORTHO05D004156 2.6e-51 208.0 757 26.4
Sc03g0004310 Simmondsia chinensis HOM05D003614 ORTHO05D004156 2.6e-51 208.0 730 26.2
Nn3g18642 Nelumbo nucifera HOM05D003614 ORTHO05D004156 3.4e-51 207.6 752 26.2
CAN.G397.92 Capsicum annuum HOM05D003614 ORTHO05D004156 9.9e-51 206.1 744 26.2
Atru.chr4.881 Acer truncatum HOM05D003614 ORTHO05D004156 1.3e-50 205.7 765 25.8
SEGI_12312 Sequoiadendron giganteum HOM05D003614 ORTHO05D004156 1.7e-50 205.3 737 25.4
MD02G1287300 Malus domestica HOM05D003614 ORTHO05D004156 2.2e-50 204.9 763 26.7
Nitab4.5_0000573g0140 Nicotiana tabacum HOM05D003614 ORTHO05D004156 2.2e-50 204.9 748 25.4
TWI74G0358 Tripterygium wilfordii HOM05D003614 ORTHO05D004156 2.2e-50 204.9 757 25.4
vmacro12792 Vaccinium macrocarpon HOM05D003614 ORTHO05D004156 2.9e-50 204.5 749 25.4
AUR62017887 Chenopodium quinoa HOM05D003614 ORTHO05D004156 6.4e-50 203.4 720 26.8
Manes.09G100100 Manihot esculenta HOM05D003614 ORTHO05D004156 1.4e-49 202.2 741 26.2
Lsat_1_v5_gn_6_112880 Lactuca sativa HOM05D003614 ORTHO05D004156 4.2e-49 200.7 756 25.9
TAR628G1743 Trochodendron aralioides HOM05D003614 ORTHO05D004156 4.2e-49 200.7 743 24.6
Glyma.17G135400 Glycine max HOM05D003614 ORTHO05D004156 7.1e-49 199.9 815 25.4
ECA233G5653 Erigeron canadensis HOM05D003614 ORTHO05D004156 9.3e-49 199.5 786 24.7
Phvul.003G215300 Phaseolus vulgaris HOM05D003614 ORTHO05D004156 2.1e-48 198.4 743 26.0
Aqoxy6G00302 Aquilegia oxysepala HOM05D003614 ORTHO05D004156 2.7e-48 198.0 736 26.1
ATR0691G002 Amborella trichopoda HOM05D003614 ORTHO05D004156 4.6e-48 197.2 751 25.8
VMungo1215G0817 Vigna mungo HOM05D003614 ORTHO05D004156 6.0e-48 196.8 737 25.1
PGR119G0394 Punica granatum HOM05D003614 ORTHO05D004156 7.8e-48 196.4 762 26.4
QL03p003747 Quercus lobata HOM05D003614 ORTHO05D004156 1.0e-47 196.1 228 47.8
FAN03G2482 Fragaria x ananassa HOM05D003614 ORTHO05D004156 1.7e-47 195.3 763 26.0
FAN06G2474 Fragaria x ananassa HOM05D003614 ORTHO05D004156 1.7e-47 195.3 772 25.1
Ah.02g121610 Amaranthus hybridus HOM05D003614 ORTHO05D004156 2.3e-47 194.9 778 26.5
FvH4_7g02870 Fragaria vesca HOM05D003614 ORTHO05D004156 3.0e-47 194.5 762 25.5
Migut.L01806 Erythranthe guttata HOM05D003614 ORTHO05D004156 5.1e-47 193.7 749 24.8
Gohir.D09G211130 Gossypium hirsutum HOM05D003614 ORTHO05D004156 1.5e-46 192.2 733 25.9
BraA07t31560Z Brassica rapa HOM05D003614 ORTHO05D004156 4.8e-45 187.2 780 24.1
RcHm_v2.0_Chr1g0323821 Rosa chinensis HOM05D003614 ORTHO05D004156 4.8e-45 187.2 737 25.2
Sp5g29510 Schrenkiella parvula HOM05D003614 ORTHO05D004156 6.2e-45 186.8 740 25.8
Dinv07113 Davidia involucrata HOM05D003614 ORTHO05D004156 1.8e-44 185.3 715 25.5
AUR62003572 Chenopodium quinoa HOM05D003614 ORTHO05D004156 2.4e-44 184.9 723 25.4
C06p48510 Brassica napus HOM05D003614 ORTHO05D004156 6.9e-44 183.3 782 24.6
arahy.Tifrunner.gnm1.ann1.8A3W3K Arachis hypogaea HOM05D003614 ORTHO05D004156 1.5e-43 182.2 758 24.7
Rhsim10G0133600 Rhododendron simsii HOM05D003614 ORTHO05D004156 1.5e-43 182.2 745 25.2
MSTRG.10382 Avicennia marina HOM05D003614 ORTHO05D004156 3.4e-43 181.0 736 24.3
SHI13956 Sapria himalayana HOM05D003614 ORTHO05D004156 4.5e-43 180.6 775 24.6
unitig_8.g4728 Utricularia gibba HOM05D003614 ORTHO05D004156 7.6e-43 179.9 760 25.7
BolC6t39880H Brassica oleracea HOM05D003614 ORTHO05D004156 1.7e-42 178.7 782 24.2
Psat5g223160 Pisum sativum HOM05D003614 ORTHO05D004156 2.2e-42 178.3 830 24.6
Prupe.2G034000 Prunus persica HOM05D003614 ORTHO05D004156 2.2e-42 178.3 581 27.2
COL.COLO4_35758 Corchorus olitorius HOM05D003614 ORTHO05D004156 3.8e-42 177.6 558 28.9
HPP92_024090 Vanilla planifolia HOM05D003614 ORTHO05D004156 4.9e-42 177.2 735 24.4
A07p40160 Brassica napus HOM05D003614 ORTHO05D004156 6.4e-42 176.8 748 24.5
CsaV3_4G012020 Cucumis sativus L. HOM05D003614 ORTHO05D004156 8.4e-42 176.4 737 24.4
MELO3C008840.2 Cucumis melo HOM05D003614 ORTHO05D004156 1.4e-41 175.6 733 23.9
Aa31LG4G4600 Aethionema arabicum HOM05D003614 ORTHO05D004156 1.9e-41 175.3 784 24.2
ClCG04G005530 Citrullus lanatus HOM05D003614 ORTHO05D004156 4.2e-41 174.1 744 24.3
Lalb_Chr21g0312211 Lupinus albus HOM05D003614 ORTHO05D004156 7.1e-41 173.3 683 24.9
Ca_00254_v3 Cicer arietinum L. HOM05D003614 ORTHO05D004156 3.5e-40 171.0 641 25.9
Os06g0634100 Oryza sativa ssp. japonica HOM05D003614 ORTHO05D004156 4.6e-40 170.6 775 23.9
Gohir.A09G213532 Gossypium hirsutum HOM05D003614 ORTHO05D004156 1.8e-39 168.7 695 25.9
TPR.G5668 Trifolium pratense HOM05D003614 ORTHO05D004156 1.8e-39 168.7 752 25.1
Lj4C836G14 Lonicera japonica HOM05D003614 ORTHO05D004156 2.3e-39 168.3 558 26.0
Zm00001eb387540 Zea mays HOM05D003614 ORTHO05D004156 3.9e-39 167.5 759 24.1
BcaC08g46865 Brassica carinata HOM05D003614 ORTHO05D004156 1.3e-37 162.5 770 22.9
Actinidia06613 Actinidia chinensis HOM05D003614 ORTHO05D004156 6.2e-37 160.2 737 23.7
CSS0046512 Camellia sinensis var. sinensis HOM05D003614 ORTHO05D004156 2.4e-36 158.3 770 23.0
Lj1C1119T2 Lonicera japonica HOM05D003614 ORTHO05D004156 2.9e-34 151.4 107 67.3
SGA_v2.0_scaffold35G14037 Striga asiatica HOM05D003614 ORTHO05D004156 9.3e-33 146.4 249 34.1
CDE05G2135 Ceratophyllum demersum HOM05D003614 ORTHO05D004156 1.6e-32 145.6 224 37.1
AT1G74350 Arabidopsis thaliana HOM05D003614 ORTHO05D004156 2.1e-32 145.2 553 26.0
AL2G34200 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 2.3e-31 141.7 553 25.9
BcaC06g32108 Brassica carinata HOM05D003227 ORTHO05D003778 3.0e-31 141.4 100 72.0
Lj3g0020898 Lotus japonicus HOM05D003614 ORTHO05D004156 6.2e-29 133.7 253 34.4
TPR.G1400 Trifolium pratense HOM05D003614 ORTHO05D004156 1.8e-28 132.1 775 23.6
Rhsim10G0133500 Rhododendron simsii HOM05D003614 ORTHO05D004156 5.3e-28 130.6 172 39.5
QL03p003745 Quercus lobata HOM05D003614 ORTHO05D004156 1.7e-18 99.0 137 45.3
Cpa.g.sc42.164 Carica papaya HOM05D003614 ORTHO05D004156 1.2e-16 92.8 167 37.7
Prupe.3G158600 Prunus persica HOM05D003614 ORTHO05D004156 2.2e-13 82.0 74 55.4
Pp3c13_4900 Physcomitrium patens HOM05D001560 ORTHO05D003613 3.4e-11 74.7 225 24.4
QL07p005715 Quercus lobata HOM05D003614 ORTHO05D004156 1.3e-10 72.8 61 60.7
Pp3c2_1860 Physcomitrium patens HOM05D001560 ORTHO05D003613 5.5e-09 67.4 240 25.4
unitig_748.g7230 Utricularia gibba HOM05D003614 ORTHO05D004156 1.2e-08 66.2 90 41.1
Pp3c2_27600 Physcomitrium patens HOM05D003614 ORTHO05D004156 1.4e-07 62.8 231 22.9
QL07p006739 Quercus lobata HOM05D000001 ORTHO05D010694 5.1e-07 60.8 75 50.7
Pp3c6_21460 Physcomitrium patens HOM05D003302 ORTHO05D003785 1.1e-06 59.7 129 30.2


User provided reference genes

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