Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro23145 Vaccinium macrocarpon HOM05D005018 ORTHO05D006786 1.5e-267 925.6 464 100.0
vmacro23049 Vaccinium macrocarpon HOM05D005018 ORTHO05D006786 1.7e-247 859.0 506 87.7
Rhsim12G0009100 Rhododendron simsii HOM05D005018 ORTHO05D006786 3.1e-233 811.6 540 79.1
Actinidia06572 Actinidia chinensis HOM05D005018 ORTHO05D006786 2.7e-229 798.5 503 81.5
Dinv15533 Davidia involucrata HOM05D005018 ORTHO05D006786 3.9e-228 794.7 504 80.2
QL10p041655 Quercus lobata HOM05D005018 ORTHO05D006786 2.2e-226 788.9 504 79.6
QL10p041885 Quercus lobata HOM05D005018 ORTHO05D006786 1.1e-225 786.6 504 79.4
CSS0041776 Camellia sinensis var. sinensis HOM05D005018 ORTHO05D006786 1.8e-225 785.8 506 79.2
Cfa002185 Carpinus fangiana HOM05D005018 ORTHO05D006786 6.5e-223 777.3 494 79.6
TAR625G0766 Trochodendron aralioides HOM05D005018 ORTHO05D006786 6.5e-223 777.3 504 78.2
Duzib264G1136 Durio zibethinus HOM05D005018 ORTHO05D006786 1.1e-222 776.5 499 79.2
Gorai.006G006100 Gossypium raimondii HOM05D005018 ORTHO05D006786 5.5e-222 774.2 501 78.6
CSS0009965 Camellia sinensis var. sinensis HOM05D005018 ORTHO05D006786 9.4e-222 773.5 520 76.9
MD07G1060700 Malus domestica HOM05D005018 ORTHO05D006786 3.6e-221 771.5 490 80.2
Gohir.D09G004500 Gossypium hirsutum HOM05D005018 ORTHO05D006786 6.1e-221 770.8 501 78.4
CiPaw.03G118700 Carya illinoinensis HOM05D005018 ORTHO05D006786 7.9e-221 770.4 504 77.8
COL.COLO4_35799 Corchorus olitorius HOM05D005018 ORTHO05D006786 7.9e-221 770.4 501 78.4
Gohir.A09G005200 Gossypium hirsutum HOM05D005018 ORTHO05D006786 3.0e-220 768.5 491 79.6
Manes.02G085200 Manihot esculenta HOM05D005018 ORTHO05D006786 2.0e-219 765.8 504 77.8
PGR119G0715 Punica granatum HOM05D005018 ORTHO05D006786 2.5e-219 765.4 505 77.4
MD02G1260800 Malus domestica HOM05D005018 ORTHO05D006786 7.4e-219 763.8 503 77.7
DCAR_018989 Daucus carota HOM05D005018 ORTHO05D006786 4.8e-218 761.1 503 76.1
Lj2A615G13 Lonicera japonica HOM05D005018 ORTHO05D006786 1.8e-217 759.2 504 76.8
Nn5g28451 Nelumbo nucifera HOM05D005018 ORTHO05D006786 2.4e-217 758.8 497 77.7
SalBow6G7214 Salvia bowleyana HOM05D005018 ORTHO05D006786 5.3e-217 757.7 501 77.4
Medtr8g094030 Medicago truncatula HOM05D005018 ORTHO05D006786 9.1e-217 756.9 504 76.6
Glyma.05G193600 Glycine max HOM05D005018 ORTHO05D006786 2.0e-216 755.7 504 76.4
CsaV3_6G041220 Cucumis sativus L. HOM05D005018 ORTHO05D006786 2.6e-216 755.4 503 76.9
THA.LOC104804457 Tarenaya hassleriana HOM05D005018 ORTHO05D006786 2.6e-216 755.4 499 76.8
Sed0008983 Sechium edule HOM05D005018 ORTHO05D006786 5.9e-216 754.2 495 77.4
Potri.005G066300 Populus trichocarpa HOM05D005018 ORTHO05D006786 7.7e-216 753.8 500 77.0
Glyma.08G001700 Glycine max HOM05D005018 ORTHO05D006786 1.3e-215 753.1 504 76.2
MSTRG.21275 Avicennia marina HOM05D005018 ORTHO05D006786 1.7e-215 752.7 503 76.7
MELO3C024598.2 Cucumis melo HOM05D005018 ORTHO05D006786 2.2e-215 752.3 503 77.1
Oeu006102.4 Olea europaea HOM05D005018 ORTHO05D006786 2.9e-215 751.9 504 75.0
EL10Ac4g09610 Beta vulgaris HOM05D005018 ORTHO05D006786 6.5e-215 750.7 505 75.2
MBI03_g13501_MAGBIO Magnolia biondii HOM05D005018 ORTHO05D006786 6.5e-215 750.7 505 76.4
CANSAT01G0968 Cannabis sativa HOM05D005018 ORTHO05D006786 1.1e-214 750.0 504 75.6
Lj4g0009092 Lotus japonicus HOM05D005018 ORTHO05D006786 1.1e-214 750.0 505 76.0
RcHm_v2.0_Chr1g0331701 Rosa chinensis HOM05D005018 ORTHO05D006786 1.1e-214 750.0 504 76.2
Lalb_Chr07g0184291 Lupinus albus HOM05D005018 ORTHO05D006786 1.4e-214 749.6 504 75.6
Sc09g0002290 Simmondsia chinensis HOM05D005018 ORTHO05D006786 3.2e-214 748.4 505 75.4
Sopen01g030230 Solanum pennellii HOM05D005018 ORTHO05D006786 4.2e-214 748.0 490 76.9
Ca_17625_v3 Cicer arietinum L. HOM05D005018 ORTHO05D006786 7.2e-214 747.3 504 75.2
TWI79G0394 Tripterygium wilfordii HOM05D005018 ORTHO05D006786 9.4e-214 746.9 495 77.2
Migut.D00797 Erythranthe guttata HOM05D005018 ORTHO05D006786 1.2e-213 746.5 500 75.6
VMungo0251G2317 Vigna mungo HOM05D005018 ORTHO05D006786 1.6e-213 746.1 504 75.8
ECA240G3046 Erigeron canadensis HOM05D005018 ORTHO05D006786 2.7e-213 745.3 495 77.0
TPR.G37346 Trifolium pratense HOM05D005018 ORTHO05D006786 1.4e-212 743.0 498 75.9
Solyc01g068290.4 Solanum lycopersicum HOM05D005018 ORTHO05D006786 2.3e-212 742.3 490 76.3
CAN.G410.44 Capsicum annuum HOM05D005018 ORTHO05D006786 3.9e-212 741.5 484 76.2
Sabra05G0054700 Salix brachista HOM05D005018 ORTHO05D006786 5.1e-212 741.1 535 71.8
arahy.Tifrunner.gnm1.ann1.YY52IF Arachis hypogaea HOM05D005018 ORTHO05D006786 4.4e-211 738.0 498 75.9
Peaxi162Scf00087g00314 Petunia axillaris HOM05D005018 ORTHO05D006786 4.4e-211 738.0 486 77.4
Cc02_g29440 Coffea canephora HOM05D005018 ORTHO05D006786 5.7e-211 737.6 501 75.0
Oeu026685.1 Olea europaea HOM05D005018 ORTHO05D006786 9.7e-211 736.9 564 68.1
AUR62006851 Chenopodium quinoa HOM05D005018 ORTHO05D006786 1.3e-210 736.5 478 77.4
FAN06G2729 Fragaria x ananassa HOM05D005018 ORTHO05D006786 1.3e-210 736.5 532 72.0
Aqoxy6G00298 Aquilegia oxysepala HOM05D005018 ORTHO05D006786 2.2e-210 735.7 500 73.6
HanXRQChr03g0092941 Helianthus annuus HOM05D005018 ORTHO05D006786 4.8e-210 734.6 495 76.0
Nitab4.5_0000316g0160 Nicotiana tabacum HOM05D005018 ORTHO05D006786 1.1e-209 733.4 490 76.3
FAN10G3591 Fragaria x ananassa HOM05D005018 ORTHO05D006786 3.1e-209 731.9 532 71.6
GSVIVG01026449001 Vitis vinifera HOM05D005018 ORTHO05D006786 5.3e-209 731.1 411 87.8
FAN03G0747 Fragaria x ananassa HOM05D005018 ORTHO05D006786 1.5e-208 729.6 532 71.4
Lsat_1_v5_gn_3_126721 Lactuca sativa HOM05D005018 ORTHO05D006786 1.5e-208 729.6 491 76.2
Hund28182 Selenicereus undatus HOM05D005018 ORTHO05D006786 2.0e-208 729.2 436 81.7
Hund28185 Selenicereus undatus HOM05D005018 ORTHO05D006786 2.0e-208 729.2 436 81.7
AT2G13440 Arabidopsis thaliana HOM05D005018 ORTHO05D006786 3.5e-208 728.4 498 74.5
AL3G45320 Arabidopsis lyrata HOM05D005018 ORTHO05D006786 1.7e-207 726.1 498 74.5
CARHR104850 Cardamine hirsuta HOM05D005018 ORTHO05D006786 1.7e-207 726.1 495 74.3
arahy.Tifrunner.gnm1.ann1.IZT9KT Arachis hypogaea HOM05D005018 ORTHO05D006786 2.9e-207 725.3 517 72.9
Carub.0003s2795 Capsella rubella HOM05D005018 ORTHO05D006786 5.0e-207 724.5 501 73.9
Thhalv10022575m.g Eutrema salsugineum HOM05D005018 ORTHO05D006786 1.1e-206 723.4 501 73.7
Phvul.002G274000 Phaseolus vulgaris HOM05D005018 ORTHO05D006786 1.1e-206 723.4 439 81.8
BcaB08g34530 Brassica carinata HOM05D005018 ORTHO05D006786 9.4e-206 720.3 504 73.4
A03p44940 Brassica napus HOM05D005018 ORTHO05D006786 9.4e-206 720.3 504 73.2
ATR0730G013 Amborella trichopoda HOM05D005018 ORTHO05D006786 6.1e-205 717.6 505 72.1
BcaC01g03124 Brassica carinata HOM05D005018 ORTHO05D006786 1.8e-204 716.1 504 73.2
C03p55820 Brassica napus HOM05D005018 ORTHO05D006786 1.8e-204 716.1 504 73.2
Sp3g26900 Schrenkiella parvula HOM05D005018 ORTHO05D006786 4.0e-204 714.9 501 73.1
Os01g0960300 Oryza sativa ssp. japonica HOM05D005018 ORTHO05D006786 6.7e-204 714.1 502 71.3
Thecc.01G136300 Theobroma cacao HOM05D005018 ORTHO05D006786 6.7e-204 714.1 501 73.9
BraA03t13631Z Brassica rapa HOM05D005018 ORTHO05D006786 3.3e-203 711.8 522 71.1
ClCG01G015110 Citrullus lanatus HOM05D005018 ORTHO05D006786 3.3e-203 711.8 515 72.6
Aa31sc255G10 Aethionema arabicum HOM05D005018 ORTHO05D006786 2.2e-202 709.1 507 72.0
HPP92_016130 Vanilla planifolia HOM05D005018 ORTHO05D006786 2.4e-201 705.7 497 71.6
BolC3t17863H Brassica oleracea HOM05D005018 ORTHO05D006786 2.6e-200 702.2 495 73.5
SGA_v2.0_scaffold5G02934 Striga asiatica HOM05D005018 ORTHO05D006786 3.6e-197 691.8 546 67.9
Psat7g044640 Pisum sativum HOM05D005018 ORTHO05D006786 2.0e-192 676.0 504 70.4
Zm00001eb140420 Zea mays HOM05D005018 ORTHO05D006786 1.1e-182 643.7 414 77.1
Mapoly0069s0053 Marchantia polymorpha HOM05D005018 ORTHO05D006786 1.9e-182 642.9 484 67.1
Pp3c16_24810 Physcomitrium patens HOM05D005018 ORTHO05D006786 1.8e-180 636.3 478 65.9
unitig_0.g220 Utricularia gibba HOM05D005018 ORTHO05D006786 2.6e-179 632.5 504 65.9
PGSC0003DMG400006748 Solanum tuberosum HOM05D005018 ORTHO05D006786 4.1e-177 625.2 365 83.6
FvH4_7g05150 Fragaria vesca HOM05D005018 ORTHO05D006786 5.6e-174 614.8 445 71.9
CBR_g18682 Chara braunii HOM05D005018 ORTHO05D006786 8.0e-173 610.9 479 64.9
AUR62000506 Chenopodium quinoa HOM05D005018 ORTHO05D006786 3.7e-170 602.1 412 73.8
SMO139G0120 Selaginella moellendorffii HOM05D005018 ORTHO05D006786 1.7e-159 566.6 459 62.7
Cre10.g428678 Chlamydomonas reinhardtii HOM05D005018 ORTHO05D006786 1.5e-155 553.5 480 58.8
Atru.chr4.947 Acer truncatum HOM05D005018 ORTHO05D006786 2.4e-148 529.6 330 81.5
Prupe.5G002000 Prunus persica HOM05D005018 ORTHO05D006786 2.4e-148 529.6 323 82.7
MCO09G341 Micromonas commoda HOM05D005018 ORTHO05D006786 1.3e-146 523.9 478 57.5
Eucgr.I00131 Eucalyptus grandis HOM05D005018 ORTHO05D006786 6.0e-144 515.0 323 80.2
Ah.06g190950 Amaranthus hybridus HOM05D005018 ORTHO05D006786 1.4e-140 503.8 356 72.8
PRCOL_00006684 Prasinoderma coloniale HOM05D005018 ORTHO05D006786 7.6e-139 498.0 523 53.2
Ciclev10003172m.g Citrus clementina HOM05D005018 ORTHO05D006786 4.2e-121 439.1 272 80.1
Nitab4.5_0006307g0020 Nicotiana tabacum HOM05D005018 ORTHO05D006786 6.7e-119 431.8 272 78.7
Haze_25310 Corylus avellana HOM05D005018 ORTHO05D006786 9.3e-113 411.4 369 60.7
Eucgr.I00140 Eucalyptus grandis HOM05D005018 ORTHO05D006786 2.3e-111 406.8 391 59.8
BolC8t48115H Brassica oleracea HOM05D005018 ORTHO05D006786 4.5e-107 392.5 384 56.5
BcaC07g37734 Brassica carinata HOM05D005018 ORTHO05D006786 1.3e-93 347.8 344 55.8
Ciclev10002140m.g Citrus clementina HOM05D005018 ORTHO05D006786 7.0e-92 342.0 235 75.3
AagrBONN_evm.TU.Sc2ySwM_344.2451 Anthoceros agrestis HOM05D005018 ORTHO05D006786 5.7e-86 322.4 230 70.4
Cpa.g.sc1441.1 Carica papaya HOM05D005018 ORTHO05D006786 2.9e-82 310.1 169 91.7
MD07G1060500 Malus domestica HOM05D005018 ORTHO05D006786 3.8e-82 309.7 218 73.4
Haze_26929 Corylus avellana HOM05D005018 ORTHO05D006786 1.9e-73 280.8 381 39.6
Cfa023424 Carpinus fangiana HOM05D005018 ORTHO05D006786 5.9e-67 259.2 419 35.8
MCO09G386 Micromonas commoda HOM05D005018 ORTHO05D006786 1.2e-62 245.0 414 37.4
SEGI_07875 Sequoiadendron giganteum HOM05D005018 ORTHO05D006786 4.0e-55 219.9 214 57.0
Haze_26659 Corylus avellana HOM05D005018 ORTHO05D006786 9.2e-52 208.8 227 49.3
Haze_25306 Corylus avellana HOM05D005018 ORTHO05D000965 1.3e-45 188.3 147 70.1
Haze_25309 Corylus avellana HOM05D005018 ORTHO05D006786 9.9e-38 162.2 111 71.2
Cpa.g.sc42.187 Carica papaya HOM05D005018 ORTHO05D006786 3.0e-34 150.6 125 60.8
Haze_18314 Corylus avellana HOM05D005018 ORTHO05D006786 1.2e-32 145.2 138 57.2
SEGI_06865 Sequoiadendron giganteum HOM05D005018 ORTHO05D006786 2.8e-32 144.1 102 64.7
Zm00001eb292630 Zea mays HOM05D005018 ORTHO05D006786 2.8e-32 144.1 125 61.6
Cpa.g.sc1441.2 Carica papaya HOM05D005018 ORTHO05D006786 4.0e-31 140.2 90 78.9
Zm00001eb074000 Zea mays HOM05D005018 ORTHO05D006786 2.6e-30 137.5 108 66.7
Lsat_1_v5_gn_8_7740 Lactuca sativa HOM05D005018 ORTHO05D006786 5.8e-30 136.3 71 81.7
CDE08G0903 Ceratophyllum demersum HOM05D005018 ORTHO05D006786 2.7e-27 127.5 90 72.2
Ah.06g190940 Amaranthus hybridus HOM05D005018 ORTHO05D006786 3.5e-27 127.1 87 71.3
Haze_18329 Corylus avellana HOM05D001982 ORTHO05D008035 9.3e-20 102.4 60 76.7
HanXRQChr09g0246051 Helianthus annuus HOM05D005018 ORTHO05D006171 1.6e-16 91.7 46 82.6
HanXRQChr10g0278491 Helianthus annuus HOM05D005018 ORTHO05D006786 4.0e-15 87.0 47 80.9
C09p47090 Brassica napus HOM05D036241 ORTHO05D032846 1.2e-06 58.9 99 34.3
Cpa.g.c37459 Carica papaya HOM05D005018 ORTHO05D043556 3.4e-06 57.4 27 96.3


User provided reference genes

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