Gene: Rhsim12G0009100
General Information
Structural Information
- Species Rhododendron simsii
- Gene Identifier Rhsim12G0009100
- Transcript Identifier Rhsim12G0009100.1
- Gene Type Coding gene
- Location chr12 : 1054571-1084052 : positive
Gene Family Information
- ID HOM05D005018
- #Genes/#Species 148/97
- Phylogenetic origin
- ID ORTHO05D006786
- #Genes/#Species 138/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Rhsim12G0009100.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008033 | IEA | InterPro | tRNA processing | |
| GO:0002098 | IEA | InterPro | tRNA wobble uridine modification |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0050660 | IEA | InterPro | flavin adenine dinucleotide binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0070615 | IEA | InterPro | nucleosome-dependent ATPase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002218 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related |
| IPR004416 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG |
| IPR040131 | MnmG, N-terminal domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001650 | Helicase, C-terminal |
| IPR036188 | FAD/NAD(P)-binding domain superfamily |
| IPR044920 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal subdomain |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR000330 | SNF2, N-terminal |
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR026904 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |